# Parameters
data_name = "Srf"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:38:10,909 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Srf: Motif: M00178_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Srf

Unique Cell types only TF-MoDISco finds Srf: #12

Cell type	Modisco	Homer
PNCRS;A;CL	Pattern: metacluster_0/pattern_17 Significance: 0.0530381	Absent
NK_LVRD;CD19-CD3e-NKp46+DX+Trail-;A;GEO	Pattern: metacluster_1/pattern_17 Significance: 0.038150199999999995	Absent
CD4+CD8+TCR+CD69+CD24+;MHC2defM;A;C	Pattern: metacluster_1/pattern_16 Significance: 0.00277475	Absent
CD4+CD8+TCR+CD69-CD24-;MHC2defM;A;CL	Pattern: metacluster_1/pattern_14 Significance: 0.0361529	Absent
Mammary_GLND;A;GEO	Pattern: metacluster_1/pattern_21 Significance: 0.00154627	Absent
wES.CRNL_NRL_CRST;E10.5;A;GEO	Pattern: metacluster_0/pattern_20 Significance: 0.014011299999999999	Absent
3134_mammaryADNCRCNM;D;En	Pattern: metacluster_0/pattern_27 Significance: 0.0192118	Absent
ES;MEF;A;CL	Pattern: metacluster_1/pattern_13 Significance: 0.00198246	Absent
Muller;P12;D;En	Pattern: metacluster_1/pattern_24 Significance: 0.00318955	Absent
LRG_INTSTN;A;CL	Pattern: metacluster_0/pattern_11 Significance: 0.05309880000000001	Absent
NIH3T3;D;En	Pattern: metacluster_1/pattern_22 Significance: 0.00224262	Absent
Mammary_BptfKO;A;GEO	Pattern: metacluster_0/pattern_24 Significance: 0.0466442	Absent

Unique Cell types only Homer finds Srf: #1

Cell type	Modisco	Homer
LNG;P0;D;En	Absent	Pattern: motif21.motif Significance: 0.0476634