# Parameters
data_name = "PNCRS;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_64-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_64-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 18:53:51,899 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	pancreas
Cell Group	Other Tissues
Experiment Name	ATAC
Experiment Group	Casellas Lab

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	36020	20104	11.3049	4730481	93650	0.0199	243720	0.0517	1301106	0.2762
rep2	36020	20104	7.4276	42092454	1383081	0.0329	2289961	0.0544	12429786	0.2954

Modelling Metadata

Metric	Value
auPRC	0.6528
Calibrated Recall at 50% FDR	0.21
Number of Positive Examples in Test Data	24452
Number of Negative Examples in Test Data	8046399
Imbalance Ratio in Test Data	0.003
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #18

Pattern Name	TF Name(s)	Modisco
metacluster_0/pattern_0 # seqlets: 4894 SequenceContrib ScoresHyp_Contrib Scores	Sp2, Sp3, Klf3, Sp1, Sp4, Klf6, Klf4, E2f4, Klf5, Klf7, Egr1, Sp5, Zbtb17, Klf8, Klf12, Egr2, Wt1, Zfp281, Klf1, Maz, E2f1, Srebf2, Klf15, Sall4, Ctcfl, Egr3, Zfp740
metacluster_0/pattern_1 # seqlets: 2750 SequenceContrib ScoresHyp_Contrib Scores	Gabpa, Elk1, Fli1, Elk4, Erg, Ets1, Etv5, Elk3, Etv4, Etv6, Etv1, Fev, Elf1, XP_911724.4, Etv3, Etv2, Spi1, Elf4, Elf2, Elf5, Ehf, Spdef, Spib, Spic, Elf3, Irf8, Irf4
metacluster_0/pattern_2 # seqlets: 2588 SequenceContrib ScoresHyp_Contrib Scores	Usf2, Creb1, Atf1, Atf2, Atf7, Crem, Jdp2, Usf1, Zfx, Creb5, Atf3, Tfec, Tfe3, Bhlhe40, Srebf1, Mitf, Rfx1, Fosl2, Tfeb, Mxi1, Rxrb, Arntl, Mlx
metacluster_0/pattern_3 # seqlets: 2572 SequenceContrib ScoresHyp_Contrib Scores	Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_0/pattern_4 # seqlets: 1809 SequenceContrib ScoresHyp_Contrib Scores	Nrf1
metacluster_0/pattern_5 # seqlets: 1335 SequenceContrib ScoresHyp_Contrib Scores	Taf1, Yy1, Zfp42
metacluster_0/pattern_6 # seqlets: 1249 SequenceContrib ScoresHyp_Contrib Scores	Ctcf
metacluster_0/pattern_7 # seqlets: 1008 SequenceContrib ScoresHyp_Contrib Scores	Zfp143, Thap11, Tbx2
metacluster_0/pattern_8 # seqlets: 457 SequenceContrib ScoresHyp_Contrib Scores	Zbtb33
metacluster_0/pattern_9 # seqlets: 283 SequenceContrib ScoresHyp_Contrib Scores	Irf1, Irf2, Irf7, Prdm1, Irf3, Stat1, Stat2, Irf9, Batf3
metacluster_0/pattern_10 # seqlets: 226 SequenceContrib ScoresHyp_Contrib Scores	Jun, Jund, Fos, Fosl1, Fosb, Junb, Batf, Bach2, Nfe2l2, Nfe2, Bach1, Mafa, Mafk
metacluster_0/pattern_11 # seqlets: 160 SequenceContrib ScoresHyp_Contrib Scores	Rfx3, Rfx2, Rfx4, Rfx7, Rfx6
metacluster_0/pattern_12 # seqlets: 97 SequenceContrib ScoresHyp_Contrib Scores
metacluster_0/pattern_13 # seqlets: 93 SequenceContrib ScoresHyp_Contrib Scores
metacluster_0/pattern_14 # seqlets: 85 SequenceContrib ScoresHyp_Contrib Scores	Irf5
metacluster_0/pattern_15 # seqlets: 70 SequenceContrib ScoresHyp_Contrib Scores	Pou2f2, Pou5f1, Pou2f1, Nanog, Sox2
metacluster_0/pattern_16 # seqlets: 39 SequenceContrib ScoresHyp_Contrib Scores	Six4
metacluster_0/pattern_17 # seqlets: 37 SequenceContrib ScoresHyp_Contrib Scores	Srf

Click here for Motifs by TF-MoDISco: #126

TF Name	Pattern(s)
Sp2	Pattern Name Modisco Significance metacluster_0/pattern_0 8.68512e-11 metacluster_0/pattern_5 3.77024e-05 metacluster_0/pattern_6 0.00583856 metacluster_0/pattern_8 0.000227562
Sp3	Pattern Name Modisco Significance metacluster_0/pattern_0 1.5483e-08 metacluster_0/pattern_5 0.00064799 metacluster_0/pattern_8 0.00109623
Klf3	Pattern Name Modisco Significance metacluster_0/pattern_0 1.45077e-07 metacluster_0/pattern_5 0.0226366
Sp1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.000353306 metacluster_0/pattern_5 0.00014474100000000002 metacluster_0/pattern_8 0.0135014
Sp4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00139529 metacluster_0/pattern_5 0.0486092
Klf6	Pattern Name Modisco Significance metacluster_0/pattern_0 0.000303045
Klf4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00106385
E2f4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.000353306
Klf5	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0008055380000000001
Klf7	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0008055380000000001
Egr1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.023330700000000003 metacluster_0/pattern_5 0.0560392
Sp5	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00107889
Zbtb17	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00121831 metacluster_0/pattern_5 0.00439637
Klf8	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00127021
Klf12	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00156354
Egr2	Pattern Name Modisco Significance metacluster_0/pattern_0 0.052444399999999995 metacluster_0/pattern_5 0.0284103
Wt1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00443075 metacluster_0/pattern_5 0.019365900000000002
Zfp281	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00569924
Klf1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.023330700000000003
Maz	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0100389 metacluster_0/pattern_5 0.025957799999999996
E2f1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0164907
Srebf2	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0289422 metacluster_0/pattern_2 0.035811300000000004
Klf15	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0289966 metacluster_0/pattern_5 0.0486092
Sall4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.032515800000000004
Ctcfl	Pattern Name Modisco Significance metacluster_0/pattern_0 0.052444399999999995 metacluster_0/pattern_6 1.9524000000000003e-11
Egr3	Pattern Name Modisco Significance metacluster_0/pattern_0 0.052444399999999995
Zfp740	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0569509
Gabpa	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000455144
Elk1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000455144
Fli1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999
Elk4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999
Erg	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999
Ets1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999
Etv5	Pattern Name Modisco Significance metacluster_0/pattern_1 8.983e-05
Elk3	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000455144
Etv4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0025043
Etv6	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0051636
Etv1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000538198
Fev	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00068583
Elf1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0007195680000000001
XP_911724.4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00074148
Etv3	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00077278
Etv2	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0015393
Spi1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.041117400000000005 metacluster_0/pattern_9 0.050702199999999996
Elf4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00343305
Elf2	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0048625
Elf5	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0275433
Ehf	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0204554
Spdef	Pattern Name Modisco Significance metacluster_0/pattern_1 0.013461700000000002
Spib	Pattern Name Modisco Significance metacluster_0/pattern_1 0.013692300000000001 metacluster_0/pattern_9 0.00087033
Spic	Pattern Name Modisco Significance metacluster_0/pattern_1 0.05096919999999999 metacluster_0/pattern_9 0.0493431
Elf3	Pattern Name Modisco Significance metacluster_0/pattern_1 0.053938099999999996
Irf8	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0460809 metacluster_0/pattern_9 5.81781e-08
Irf4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.046812599999999996 metacluster_0/pattern_9 0.0158108 metacluster_0/pattern_14 0.00518057
Usf2	Pattern Name Modisco Significance metacluster_0/pattern_2 3.31784e-06 metacluster_0/pattern_5 0.0435911 metacluster_0/pattern_8 0.023630599999999998
Creb1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.014288299999999999
Atf1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0276283
Atf2	Pattern Name Modisco Significance metacluster_0/pattern_2 0.021015700000000002
Atf7	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0102685
Crem	Pattern Name Modisco Significance metacluster_0/pattern_2 0.053064099999999996
Jdp2	Pattern Name Modisco Significance metacluster_0/pattern_2 0.00945026 metacluster_0/pattern_10 0.00045277800000000003
Usf1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.00630027
Zfx	Pattern Name Modisco Significance metacluster_0/pattern_2 0.00945026 metacluster_0/pattern_5 0.00280639 metacluster_0/pattern_8 0.00122529
Creb5	Pattern Name Modisco Significance metacluster_0/pattern_2 0.014288299999999999
Atf3	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0419205 metacluster_0/pattern_10 1.8010299999999998e-06
Tfec	Pattern Name Modisco Significance metacluster_0/pattern_2 0.014288299999999999
Tfe3	Pattern Name Modisco Significance metacluster_0/pattern_2 0.053064099999999996
Bhlhe40	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0276283
Srebf1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0441381
Mitf	Pattern Name Modisco Significance metacluster_0/pattern_2 0.025231599999999996
Rfx1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0265556 metacluster_0/pattern_5 0.00340613 metacluster_0/pattern_11 3.1792e-10 metacluster_0/pattern_12 0.056107000000000004
Fosl2	Pattern Name Modisco Significance metacluster_0/pattern_2 0.027613599999999995 metacluster_0/pattern_10 0.000310261
Tfeb	Pattern Name Modisco Significance metacluster_0/pattern_2 0.056283900000000005
Mxi1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.044187300000000006 metacluster_0/pattern_5 0.0398204
Rxrb	Pattern Name Modisco Significance metacluster_0/pattern_2 0.044187300000000006
Arntl	Pattern Name Modisco Significance metacluster_0/pattern_2 0.047266199999999994
Mlx	Pattern Name Modisco Significance metacluster_0/pattern_2 0.053064099999999996
Nfyb	Pattern Name Modisco Significance metacluster_0/pattern_3 1.50493e-12
Nfyc	Pattern Name Modisco Significance metacluster_0/pattern_3 7.67152e-09
Nfya	Pattern Name Modisco Significance metacluster_0/pattern_3 7.67152e-09
Foxi1	Pattern Name Modisco Significance metacluster_0/pattern_3 3.83721e-06
Pbx3	Pattern Name Modisco Significance metacluster_0/pattern_3 9.16295e-06
Nrf1	Pattern Name Modisco Significance metacluster_0/pattern_4 3.0463e-07
Taf1	Pattern Name Modisco Significance metacluster_0/pattern_5 7.127050000000001e-06
Yy1	Pattern Name Modisco Significance metacluster_0/pattern_5 1.40906e-05
Zfp42	Pattern Name Modisco Significance metacluster_0/pattern_5 0.013453999999999999
Ctcf	Pattern Name Modisco Significance metacluster_0/pattern_6 1.75355e-08
Zfp143	Pattern Name Modisco Significance metacluster_0/pattern_7 4.28065e-22
Thap11	Pattern Name Modisco Significance metacluster_0/pattern_7 2.7248299999999998e-21
Tbx2	Pattern Name Modisco Significance metacluster_0/pattern_7 4.816119999999999e-13
Zbtb33	Pattern Name Modisco Significance metacluster_0/pattern_8 6.18157e-05
Irf1	Pattern Name Modisco Significance metacluster_0/pattern_9 5.81781e-08
Irf2	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00087033 metacluster_0/pattern_14 0.00518057
Irf7	Pattern Name Modisco Significance metacluster_0/pattern_9 4.9369899999999996e-05 metacluster_0/pattern_14 0.0397996
Prdm1	Pattern Name Modisco Significance metacluster_0/pattern_9 5.3482799999999996e-05
Irf3	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00023808 metacluster_0/pattern_14 0.0208245
Stat1	Pattern Name Modisco Significance metacluster_0/pattern_9 0.000893913 metacluster_0/pattern_14 0.0565548
Stat2	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00102395 metacluster_0/pattern_14 0.006252000000000001
Irf9	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00107263 metacluster_0/pattern_14 0.0565548
Batf3	Pattern Name Modisco Significance metacluster_0/pattern_9 0.0481532
Jun	Pattern Name Modisco Significance metacluster_0/pattern_10 0.052764099999999994
Jund	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00729057
Fos	Pattern Name Modisco Significance metacluster_0/pattern_10 1.3345400000000001e-06
Fosl1	Pattern Name Modisco Significance metacluster_0/pattern_10 1.3345400000000001e-06
Fosb	Pattern Name Modisco Significance metacluster_0/pattern_10 1.3345400000000001e-06
Junb	Pattern Name Modisco Significance metacluster_0/pattern_10 0.048840800000000004
Batf	Pattern Name Modisco Significance metacluster_0/pattern_10 0.013965700000000001
Bach2	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00228136
Nfe2l2	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00506118
Nfe2	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00496106
Bach1	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00519443
Mafa	Pattern Name Modisco Significance metacluster_0/pattern_10 0.0333717
Mafk	Pattern Name Modisco Significance metacluster_0/pattern_10 0.0580567
Rfx3	Pattern Name Modisco Significance metacluster_0/pattern_11 0.00550766 metacluster_0/pattern_12 0.025435
Rfx2	Pattern Name Modisco Significance metacluster_0/pattern_11 7.15834e-08 metacluster_0/pattern_12 0.0346544
Rfx4	Pattern Name Modisco Significance metacluster_0/pattern_11 0.0005309609999999999 metacluster_0/pattern_12 0.0108246
Rfx7	Pattern Name Modisco Significance metacluster_0/pattern_11 0.00331415 metacluster_0/pattern_12 0.00751307
Rfx6	Pattern Name Modisco Significance metacluster_0/pattern_11 0.00550766 metacluster_0/pattern_12 0.00307422
Irf5	Pattern Name Modisco Significance metacluster_0/pattern_14 0.00159524
Pou2f2	Pattern Name Modisco Significance metacluster_0/pattern_15 0.032430400000000005
Pou5f1	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0167077
Pou2f1	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0167077
Nanog	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0167077
Sox2	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0573595
Six4	Pattern Name Modisco Significance metacluster_0/pattern_16 0.0101551
Srf	Pattern Name Modisco Significance metacluster_0/pattern_17 0.0530381

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #58

TF Name	Modisco	Homer
XP_911724.4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00074148	Pattern Name Homer Significance motif4.motif 6.25172e-06
Etv6	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0051636	Pattern Name Homer Significance motif4.motif 0.0166575
Fev	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00068583	Pattern Name Homer Significance motif4.motif 0.041292199999999994
Klf7	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0008055380000000001	Pattern Name Homer Significance motif1.motif 0.000114581
Pbx3	Pattern Name Modisco Significance metacluster_0/pattern_3 9.16295e-06	Pattern Name Homer Significance motif2.motif 0.00019174
Klf1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.023330700000000003	Pattern Name Homer Significance motif1.motif 0.0232877
Klf3	Pattern Name Modisco Significance metacluster_0/pattern_0 1.45077e-07 metacluster_0/pattern_5 0.0226366	Pattern Name Homer Significance motif1.motif 5.6493e-05
Elf5	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0275433	Pattern Name Homer Significance motif4.motif 0.00268018
Klf4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00106385	Pattern Name Homer Significance motif1.motif 0.0292869
Fosl2	Pattern Name Modisco Significance metacluster_0/pattern_2 0.027613599999999995 metacluster_0/pattern_10 0.000310261	Pattern Name Homer Significance motif5.motif 0.034958300000000005
Sp1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.000353306 metacluster_0/pattern_5 0.00014474100000000002 metacluster_0/pattern_8 0.0135014	Pattern Name Homer Significance motif1.motif 0.010952
Egr1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.023330700000000003 metacluster_0/pattern_5 0.0560392	Pattern Name Homer Significance motif1.motif 0.0118634
Elf4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00343305	Pattern Name Homer Significance motif4.motif 5.8853e-05
Elk1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000455144	Pattern Name Homer Significance motif4.motif 0.00111032
Zfp143	Pattern Name Modisco Significance metacluster_0/pattern_7 4.28065e-22	Pattern Name Homer Significance motif3.motif 7.063290000000001e-07
Elk4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999	Pattern Name Homer Significance motif4.motif 0.0007978560000000001
Ehf	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0204554	Pattern Name Homer Significance motif4.motif 0.04291880000000001
Sp2	Pattern Name Modisco Significance metacluster_0/pattern_0 8.68512e-11 metacluster_0/pattern_5 3.77024e-05 metacluster_0/pattern_6 0.00583856 metacluster_0/pattern_8 0.000227562	Pattern Name Homer Significance motif1.motif 5.7637200000000004e-05
Etv2	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0015393	Pattern Name Homer Significance motif4.motif 0.00286398
Yy1	Pattern Name Modisco Significance metacluster_0/pattern_5 1.40906e-05	Pattern Name Homer Significance motif10.motif 3.5717100000000004e-07
Nfyb	Pattern Name Modisco Significance metacluster_0/pattern_3 1.50493e-12	Pattern Name Homer Significance motif2.motif 1.64218e-09
Irf5	Pattern Name Modisco Significance metacluster_0/pattern_14 0.00159524	Pattern Name Homer Significance motif4.motif 0.0478289
Nrf1	Pattern Name Modisco Significance metacluster_0/pattern_4 3.0463e-07	Pattern Name Homer Significance motif6.motif 0.00232099
Klf5	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0008055380000000001	Pattern Name Homer Significance motif1.motif 0.00940344
Etv4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0025043	Pattern Name Homer Significance motif4.motif 0.013777200000000002
Sp3	Pattern Name Modisco Significance metacluster_0/pattern_0 1.5483e-08 metacluster_0/pattern_5 0.00064799 metacluster_0/pattern_8 0.00109623	Pattern Name Homer Significance motif1.motif 6.57131e-05
Elf2	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0048625	Pattern Name Homer Significance motif4.motif 0.000106244
Nfya	Pattern Name Modisco Significance metacluster_0/pattern_3 7.67152e-09	Pattern Name Homer Significance motif2.motif 1.63456e-07
Klf6	Pattern Name Modisco Significance metacluster_0/pattern_0 0.000303045	Pattern Name Homer Significance motif1.motif 0.00052249
Ets1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999	Pattern Name Homer Significance motif4.motif 0.00280046
Elk3	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000455144	Pattern Name Homer Significance motif4.motif 0.0007978560000000001
Jdp2	Pattern Name Modisco Significance metacluster_0/pattern_2 0.00945026 metacluster_0/pattern_10 0.00045277800000000003	Pattern Name Homer Significance motif5.motif 0.034958300000000005
Foxi1	Pattern Name Modisco Significance metacluster_0/pattern_3 3.83721e-06	Pattern Name Homer Significance motif2.motif 0.000555643
Zbtb33	Pattern Name Modisco Significance metacluster_0/pattern_8 6.18157e-05	Pattern Name Homer Significance motif7.motif 0.00872366
Thap11	Pattern Name Modisco Significance metacluster_0/pattern_7 2.7248299999999998e-21	Pattern Name Homer Significance motif3.motif 7.063290000000001e-07
Fli1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999	Pattern Name Homer Significance motif4.motif 0.00365035
Irf4	Pattern Name Modisco Significance metacluster_0/pattern_1 0.046812599999999996 metacluster_0/pattern_9 0.0158108 metacluster_0/pattern_14 0.00518057	Pattern Name Homer Significance motif4.motif 0.0478289
Etv1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000538198	Pattern Name Homer Significance motif4.motif 9.29836e-05
Sp4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00139529 metacluster_0/pattern_5 0.0486092	Pattern Name Homer Significance motif1.motif 0.0292869
Klf12	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00156354	Pattern Name Homer Significance motif1.motif 0.00835788
Atf1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0276283	Pattern Name Homer Significance motif5.motif 0.034958300000000005
Taf1	Pattern Name Modisco Significance metacluster_0/pattern_5 7.127050000000001e-06	Pattern Name Homer Significance motif10.motif 0.000153838
Nfyc	Pattern Name Modisco Significance metacluster_0/pattern_3 7.67152e-09	Pattern Name Homer Significance motif2.motif 1.70992e-07
Spdef	Pattern Name Modisco Significance metacluster_0/pattern_1 0.013461700000000002	Pattern Name Homer Significance motif4.motif 0.00481141
Etv3	Pattern Name Modisco Significance metacluster_0/pattern_1 0.00077278	Pattern Name Homer Significance motif4.motif 3.95208e-06
Creb1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.014288299999999999	Pattern Name Homer Significance motif5.motif 0.034958300000000005
Atf3	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0419205 metacluster_0/pattern_10 1.8010299999999998e-06	Pattern Name Homer Significance motif5.motif 0.034958300000000005
Elf3	Pattern Name Modisco Significance metacluster_0/pattern_1 0.053938099999999996	Pattern Name Homer Significance motif4.motif 0.00133066
Zfp42	Pattern Name Modisco Significance metacluster_0/pattern_5 0.013453999999999999	Pattern Name Homer Significance motif10.motif 0.00719453
Elf1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0007195680000000001	Pattern Name Homer Significance motif4.motif 0.00117203
Gabpa	Pattern Name Modisco Significance metacluster_0/pattern_1 0.000455144	Pattern Name Homer Significance motif4.motif 0.0128465
Spic	Pattern Name Modisco Significance metacluster_0/pattern_1 0.05096919999999999 metacluster_0/pattern_9 0.0493431	Pattern Name Homer Significance motif4.motif 0.0123714
Spi1	Pattern Name Modisco Significance metacluster_0/pattern_1 0.041117400000000005 metacluster_0/pattern_9 0.050702199999999996	Pattern Name Homer Significance motif4.motif 0.0123714
E2f4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.000353306	Pattern Name Homer Significance motif1.motif 0.00130182
Tbx2	Pattern Name Modisco Significance metacluster_0/pattern_7 4.816119999999999e-13	Pattern Name Homer Significance motif3.motif 7.71448e-05
Etv5	Pattern Name Modisco Significance metacluster_0/pattern_1 8.983e-05	Pattern Name Homer Significance motif4.motif 2.827e-05
Erg	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0006100319999999999	Pattern Name Homer Significance motif4.motif 0.00117203
Klf8	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00127021	Pattern Name Homer Significance motif1.motif 0.000370271

Unique TF-MoDISco TFs: #68

TF Name	Modisco	Homer
Rfx7	Pattern Name Modisco Significance metacluster_0/pattern_11 0.00331415 metacluster_0/pattern_12 0.00751307	Absent
Zfx	Pattern Name Modisco Significance metacluster_0/pattern_2 0.00945026 metacluster_0/pattern_5 0.00280639 metacluster_0/pattern_8 0.00122529	Absent
Fosb	Pattern Name Modisco Significance metacluster_0/pattern_10 1.3345400000000001e-06	Absent
Six4	Pattern Name Modisco Significance metacluster_0/pattern_16 0.0101551	Absent
Rfx6	Pattern Name Modisco Significance metacluster_0/pattern_11 0.00550766 metacluster_0/pattern_12 0.00307422	Absent
Egr2	Pattern Name Modisco Significance metacluster_0/pattern_0 0.052444399999999995 metacluster_0/pattern_5 0.0284103	Absent
Ctcf	Pattern Name Modisco Significance metacluster_0/pattern_6 1.75355e-08	Absent
Irf3	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00023808 metacluster_0/pattern_14 0.0208245	Absent
Fos	Pattern Name Modisco Significance metacluster_0/pattern_10 1.3345400000000001e-06	Absent
Spib	Pattern Name Modisco Significance metacluster_0/pattern_1 0.013692300000000001 metacluster_0/pattern_9 0.00087033	Absent
Irf9	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00107263 metacluster_0/pattern_14 0.0565548	Absent
Mitf	Pattern Name Modisco Significance metacluster_0/pattern_2 0.025231599999999996	Absent
Srebf1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0441381	Absent
Rxrb	Pattern Name Modisco Significance metacluster_0/pattern_2 0.044187300000000006	Absent
Bhlhe40	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0276283	Absent
Stat2	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00102395 metacluster_0/pattern_14 0.006252000000000001	Absent
Sall4	Pattern Name Modisco Significance metacluster_0/pattern_0 0.032515800000000004	Absent
Jun	Pattern Name Modisco Significance metacluster_0/pattern_10 0.052764099999999994	Absent
Creb5	Pattern Name Modisco Significance metacluster_0/pattern_2 0.014288299999999999	Absent
Mafk	Pattern Name Modisco Significance metacluster_0/pattern_10 0.0580567	Absent
Klf15	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0289966 metacluster_0/pattern_5 0.0486092	Absent
Irf8	Pattern Name Modisco Significance metacluster_0/pattern_1 0.0460809 metacluster_0/pattern_9 5.81781e-08	Absent
Mxi1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.044187300000000006 metacluster_0/pattern_5 0.0398204	Absent
Pou5f1	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0167077	Absent
Prdm1	Pattern Name Modisco Significance metacluster_0/pattern_9 5.3482799999999996e-05	Absent
Mlx	Pattern Name Modisco Significance metacluster_0/pattern_2 0.053064099999999996	Absent
Usf2	Pattern Name Modisco Significance metacluster_0/pattern_2 3.31784e-06 metacluster_0/pattern_5 0.0435911 metacluster_0/pattern_8 0.023630599999999998	Absent
Zfp281	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00569924	Absent
Atf2	Pattern Name Modisco Significance metacluster_0/pattern_2 0.021015700000000002	Absent
Tfeb	Pattern Name Modisco Significance metacluster_0/pattern_2 0.056283900000000005	Absent
Atf7	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0102685	Absent
Arntl	Pattern Name Modisco Significance metacluster_0/pattern_2 0.047266199999999994	Absent
Jund	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00729057	Absent
Tfe3	Pattern Name Modisco Significance metacluster_0/pattern_2 0.053064099999999996	Absent
Irf7	Pattern Name Modisco Significance metacluster_0/pattern_9 4.9369899999999996e-05 metacluster_0/pattern_14 0.0397996	Absent
Srf	Pattern Name Modisco Significance metacluster_0/pattern_17 0.0530381	Absent
Bach2	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00228136	Absent
Irf1	Pattern Name Modisco Significance metacluster_0/pattern_9 5.81781e-08	Absent
Zbtb17	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00121831 metacluster_0/pattern_5 0.00439637	Absent
Batf	Pattern Name Modisco Significance metacluster_0/pattern_10 0.013965700000000001	Absent
Irf2	Pattern Name Modisco Significance metacluster_0/pattern_9 0.00087033 metacluster_0/pattern_14 0.00518057	Absent
Rfx1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.0265556 metacluster_0/pattern_5 0.00340613 metacluster_0/pattern_11 3.1792e-10 metacluster_0/pattern_12 0.056107000000000004	Absent
Nfe2	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00496106	Absent
Rfx4	Pattern Name Modisco Significance metacluster_0/pattern_11 0.0005309609999999999 metacluster_0/pattern_12 0.0108246	Absent
Crem	Pattern Name Modisco Significance metacluster_0/pattern_2 0.053064099999999996	Absent
Stat1	Pattern Name Modisco Significance metacluster_0/pattern_9 0.000893913 metacluster_0/pattern_14 0.0565548	Absent
Batf3	Pattern Name Modisco Significance metacluster_0/pattern_9 0.0481532	Absent
Tfec	Pattern Name Modisco Significance metacluster_0/pattern_2 0.014288299999999999	Absent
Rfx3	Pattern Name Modisco Significance metacluster_0/pattern_11 0.00550766 metacluster_0/pattern_12 0.025435	Absent
Pou2f2	Pattern Name Modisco Significance metacluster_0/pattern_15 0.032430400000000005	Absent
Egr3	Pattern Name Modisco Significance metacluster_0/pattern_0 0.052444399999999995	Absent
Nfe2l2	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00506118	Absent
Bach1	Pattern Name Modisco Significance metacluster_0/pattern_10 0.00519443	Absent
Pou2f1	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0167077	Absent
Srebf2	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0289422 metacluster_0/pattern_2 0.035811300000000004	Absent
Junb	Pattern Name Modisco Significance metacluster_0/pattern_10 0.048840800000000004	Absent
Sp5	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00107889	Absent
Mafa	Pattern Name Modisco Significance metacluster_0/pattern_10 0.0333717	Absent
Nanog	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0167077	Absent
Wt1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.00443075 metacluster_0/pattern_5 0.019365900000000002	Absent
Usf1	Pattern Name Modisco Significance metacluster_0/pattern_2 0.00630027	Absent
E2f1	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0164907	Absent
Sox2	Pattern Name Modisco Significance metacluster_0/pattern_15 0.0573595	Absent
Zfp740	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0569509	Absent
Maz	Pattern Name Modisco Significance metacluster_0/pattern_0 0.0100389 metacluster_0/pattern_5 0.025957799999999996	Absent
Fosl1	Pattern Name Modisco Significance metacluster_0/pattern_10 1.3345400000000001e-06	Absent
Rfx2	Pattern Name Modisco Significance metacluster_0/pattern_11 7.15834e-08 metacluster_0/pattern_12 0.0346544	Absent
Ctcfl	Pattern Name Modisco Significance metacluster_0/pattern_0 0.052444399999999995 metacluster_0/pattern_6 1.9524000000000003e-11	Absent

Unique Homer TFs: #1

TF Name	Modisco	Homer
Zbtb1	Absent	Pattern Name Homer Significance motif1.motif 0.0510253