# Parameters
data_name = "Prdm9"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:29:56,425 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Prdm9: Motif: M09007_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Prdm9

Unique Cell types only TF-MoDISco finds Prdm9: #4

Cell type	Modisco	Homer
WHL_BRN;8wks;D;GEO	Pattern: metacluster_1/pattern_19 Significance: 0.0520977	Absent
416B;HMTP_SPNSN;CD34+;D;En	Pattern: metacluster_1/pattern_15 Significance: 0.050314300000000006	Absent
npES;posterior_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_20 Significance: 0.0594326	Absent
Corticotrope;A;GEO	Pattern: metacluster_0/pattern_17 Significance: 0.0388446	Absent

Unique Cell types only Homer finds Prdm9: #3

Cell type	Modisco	Homer
NPC;G4;A;GEO	Absent	Pattern: motif9.motif Significance: 0.0390789
preB_BMD;A;GEO	Absent	Pattern: motif9.motif Significance: 0.0329378
NPC;mE6;A;GEO	Absent	Pattern: motif11.motif Significance: 0.0599058