# Parameters
data_name = "Mnt"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:20:24,873 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Mnt: Motif: M01716_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Mnt: #2

Cell type	Modisco	Homer
DP3b;A;CL	Pattern: metacluster_1/pattern_3 Significance: 0.016134700000000002	Pattern: motif7.motif Significance: 0.0585529
smallDPprecrsor;CD4+CD8+CD69-;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.017308700000000003	Pattern: motif13.motif Significance: 0.03621130000000001

Unique Cell types only TF-MoDISco finds Mnt: #7

Cell type	Modisco	Homer
largeDPprecrsr;CD4+CD8+CD69-;A;CL	Pattern: metacluster_1/pattern_5 Significance: 0.012180400000000001	Absent
preB;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.059164499999999995	Absent
preB_BMD;A;GEO	Pattern: metacluster_1/pattern_5 Significance: 0.0318566	Absent
plasmaB;A;CL	Pattern: metacluster_1/pattern_5 Significance: 0.0360466	Absent
DP;A;CL	Pattern: metacluster_1/pattern_10 Significance: 0.013592600000000002	Absent
B;B220_CD43;A;GEO	Pattern: metacluster_1/pattern_9 Significance: 0.0355315	Absent
ISP;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.0371185	Absent

Unique Cell types only Homer finds Mnt: #1

Cell type	Modisco	Homer
A20;B-lymphoma;D;En	Absent	Pattern: motif13.motif Significance: 0.010257299999999999