# Parameters
data_name = "Meox2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:19:54,077 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Cell type	Modisco	Homer
wES;limb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.0029631999999999996	Pattern: motif4.motif Significance: 0.0340043
wES;Hnd_lmb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.00292386	Pattern: motif3.motif Significance: 0.0182547
BCK_SKN;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.012185600000000001	Pattern: motif9.motif Significance: 0.0271629
wES.CRNL_NRL_CRST;E10.5;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.052355200000000005	Pattern: motif3.motif Significance: 0.0271505
RTN;D1;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.0189977	Pattern: motif2.motif Significance: 0.050971300000000004
wES;RTN;E11.5;D;En	Pattern: metacluster_0/pattern_1 Significance: 0.021777599999999998	Pattern: motif3.motif Significance: 0.057912
G_NRN_P;A;GEO	Pattern: metacluster_1/pattern_14 Significance: 0.0137905	Pattern: motif13.motif Significance: 0.030762
Muller;P12;D;En	Pattern: metacluster_1/pattern_5 Significance: 0.0223341	Pattern: motif4.motif Significance: 0.015815799999999998
wES;WHL_BRN;E14.5;D;GEO	Pattern: metacluster_0/pattern_0 Significance: 0.0101461	Pattern: motif2.motif Significance: 0.0579871
wES.Fr_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_2 Significance: 0.0128296	Pattern: motif2.motif Significance: 0.0476283
wES;Hnd_BRN;E14.5;D;En	Pattern: metacluster_0/pattern_8 Significance: 0.031354200000000006	Pattern: motif3.motif Significance: 0.0232483
Md_BRN;D;En	Pattern: metacluster_1/pattern_3 Significance: 0.0107936	Pattern: motif14.motif Significance: 0.0148226
wES;WHL_BRN;E14.5;D;En	Pattern: metacluster_1/pattern_0 Significance: 0.00827525	Pattern: motif2.motif Significance: 0.0432426

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_25 Significance: 0.0146631	Absent
wES;Fr_lmb;E11.5;D;En	Pattern: metacluster_1/pattern_13 Significance: 0.00441543	Absent
wES;posterior;2;E9.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.043489	Absent
wES;FaceP;E14.5;D;En	Pattern: metacluster_0/pattern_7 Significance: 0.029881	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_18 Significance: 0.012757600000000001	Absent
npES;posterior_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.00148367	Absent
CRBL_GRNL_Precrsr;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.0139065	Absent
iPV_NRN;A;GEO	Pattern: metacluster_1/pattern_7 Significance: 0.0475355	Absent
iVIP_NRN;A;GEO	Pattern: metacluster_1/pattern_6 Significance: 0.035117699999999995	Absent
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_5 Significance: 0.015100299999999999	Absent
Hnd_BRN;P0;D;En	Pattern: metacluster_1/pattern_6 Significance: 0.023746200000000002	Absent
BL_CN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_18 Significance: 0.047327999999999995	Absent
wES;Md_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_6 Significance: 0.0172981	Absent
npES;3rd_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_16 Significance: 0.0360707	Absent
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.013289600000000002	Absent
npES;3rd_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_14 Significance: 0.034845	Absent