In [1]:
# Parameters
data_name = "wES;WHL_BRN;E14.5;D;GEO"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_213-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_213-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 19:29:11,349 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeWhole Brain (E14.5)
    Cell GroupES cells and embryonic tissues
    Experiment NameDHS
    Experiment GroupGEO
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep12601351843938.4578208215043NANANANANANA
    Modelling Metadata
    MetricValue
    auPRC0.603
    Calibrated Recall at 50% FDR0.245
    Number of Positive Examples in Test Data134051
    Number of Negative Examples in Test Data7936800
    Imbalance Ratio in Test Data0.0166
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #16
Pattern NameTF Name(s)Modisco
metacluster_0/pattern_0 # seqlets: 1970 SequenceContrib ScoresHyp_Contrib Scores
Lhx2, Lhx9, Prrx2, Vsx2, Pax6, Shox2, Alx1, Lbx2, Arx, Vsx1,

Gbx1, Lhx8, Emx2, Alx4, Uncx, Hoxa1, Msx3, Sebox, En2, Rax, Nobox,

Gsx2, Gbx2, Lhx3, Pou1f1, Rhox6, Lhx6, Lhx4, Hoxa2, Hoxd3, Vax2, Nkx1-2,

Vax1, Evx1, Alx3, En1, Noto, Nkx1-1, Pdx1, Hoxa3, Prop1, Pax7, Hoxa5,

Hoxb3, Prrx1, Mnx1, Otp, Phox2a, Pax4, Lmx1a, Hoxc5, Msx1, Hoxb5, Phox2b,

Esx1, Bsx, Nkx6-3, Hoxc6, Msx2, Hoxd1, Meox1, Nkx6-1, Dlx5, Pou2f2, Lmx1b,

Pou3f1, Barhl2, Barhl1, Pou3f2, Isx, Meox2, Hlx, Hoxb4, Evx2, Hoxa6, Lhx5,

Dbx1, Dlx2, Pou2f3, Pou2f1, Tlx2, Barx1, Dlx4, Duxbl1, Hoxa7, Lhx1, Dbx2,

Pou6f1, Barx2, Hoxb7, Hoxc10, Hoxa4, Dlx1, Isl1, Isl2, Hoxc9, Hmx2, Nanog,

Hoxc8, Pou4f3, Hoxd13, Hnf1b, Nkx3-2, Arid3b, Hnf1a, Dlx3, Nkx3-1, Pou3f4, Hmbox1,

A1JVI6_MOUSE, Hoxb6, Hoxa13, Hoxc13, Hoxc4, Hoxa9, Hoxb13, Hoxa10, Cdx1, Hoxd8, Hoxd10,

Hmx1, Hoxd9, Twist1, Cdx2, Nkx2-3, Hoxa11
metacluster_0/pattern_1 # seqlets: 1932 SequenceContrib ScoresHyp_Contrib Scores
Nfia, Nfib, Nfic
metacluster_0/pattern_2 # seqlets: 1825 SequenceContrib ScoresHyp_Contrib Scores
Neurod2, Atoh1, Neurod1, Neurog2, Olig2, Lyl1, Ptf1a, Bhlha15, Tcf21, Ascl1,

Myog, Tcf12, Ascl2, Tal1, Bhlhe22, Msc, Myod1, Neurog1, Msgn1, Tfap4, Tcf3,

Myf5, Myb, Myf6
metacluster_0/pattern_3 # seqlets: 1648 SequenceContrib ScoresHyp_Contrib Scores
Sp2, Sp3, Zfx, Sp1, Usf2, Mxi1, Klf3, Zbtb17, Rfx1, Ctcfl,

Myc
metacluster_0/pattern_4 # seqlets: 1615 SequenceContrib ScoresHyp_Contrib Scores
Sp4, Klf5, Klf6, Klf4, Sp5, Wt1, E2f4, Egr1, Klf7, Maz,

Klf8, Zfp281, Klf12, E2f1, Egr2, Klf15, Srebf2, Sall4, Klf1, Egr3
metacluster_0/pattern_5 # seqlets: 1490 SequenceContrib ScoresHyp_Contrib Scores
Ctcf
metacluster_0/pattern_6 # seqlets: 1409 SequenceContrib ScoresHyp_Contrib Scores
Sox3, Sox9, Sox4, Sox2, Sox17, Sox6, Lef1, Tcf7
metacluster_0/pattern_7 # seqlets: 909 SequenceContrib ScoresHyp_Contrib Scores
Pou5f1
metacluster_0/pattern_8 # seqlets: 786 SequenceContrib ScoresHyp_Contrib Scores
Rfx2, Rfx3, Rfx4, Rfx7, Rfx6
metacluster_0/pattern_9 # seqlets: 749 SequenceContrib ScoresHyp_Contrib Scores
Rela, Bcl6, Elf5, E2f7, Ets2, Zscan10, E2f6, Gata1, E2f3
metacluster_0/pattern_10 # seqlets: 745 SequenceContrib ScoresHyp_Contrib Scores
Gabpa, Elf1, Fli1, Elk1, Elk4, Erg, Elk3, Ets1, Fev, Etv5,

Etv1, Elf2, Etv4, Etv6, Elf4, Ehf, Etv3, XP_911724.4, Spi1, Elf3, Etv2,

Spdef, Spic, Spib
metacluster_0/pattern_11 # seqlets: 536 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_0/pattern_12 # seqlets: 495 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_0/pattern_13 # seqlets: 442 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf7, Atf2, Atf1, Crem, Usf1, Tfec, Tfe3, Jdp2, Srebf1,

Atf3, Bhlhe40, Mitf, Tfeb, Mlx, Creb5, Arntl, Fosl2, Clock, Rxrb, Creb3l2,

Xbp1
metacluster_0/pattern_14 # seqlets: 256 SequenceContrib ScoresHyp_Contrib Scores
Taf1, Yy1, Zfp42
metacluster_0/pattern_15 # seqlets: 160 SequenceContrib ScoresHyp_Contrib Scores
Thap11, Zfp143, Tbx2
Click here for Motifs by TF-MoDISco: #266
TF NamePattern(s)
Lhx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00268293
Lhx9
Pattern NameModiscoSignificance
metacluster_0/pattern_07.3724e-05
Prrx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00475141
Vsx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00033555900000000003
Pax6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00033555900000000003
Shox2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000844413
Alx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.040317
Lbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000768605
Arx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00811861
Vsx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00325624
Gbx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.006379999999999999
Lhx8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Emx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00149784
Alx4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012050100000000001
Uncx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0017565999999999999
Hoxa1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
Msx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0221164
Sebox
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
En2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00448842
Rax
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
Nobox
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Gsx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
Gbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00673965
Lhx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.031758999999999996
Pou1f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0277046
Rhox6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00171052
Lhx6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0252043
Lhx4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Hoxa2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Hoxd3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00258336
Vax2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00182567
Nkx1-2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00196758
Vax1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00237015
Evx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Alx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
En1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Noto
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Nkx1-1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00297972
Pdx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0102555
Hoxa3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00359054
Prop1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.027780799999999998
Pax7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.026535800000000002
Hoxa5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Hoxb3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Prrx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0036217
Mnx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00392025
Otp
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00428639
Phox2a
Pattern NameModiscoSignificance
metacluster_0/pattern_00.006379999999999999
Pax4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Lmx1a
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Hoxc5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Msx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Hoxb5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Phox2b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Esx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Bsx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00494004
Nkx6-3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00512101
Hoxc6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00513543
Msx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00513543
Hoxd1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00574045
Meox1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.006379999999999999
Nkx6-1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0409713
Dlx5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00681362
Pou2f2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00735844
metacluster_0/pattern_70.00424612
Lmx1b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00754865
Pou3f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0307356
Barhl2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00789525
Barhl1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.010789100000000001
Pou3f2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00868966
Isx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0091789
Meox2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0101461
Hlx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0102555
Hoxb4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0252043
Evx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011034799999999999
Hoxa6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0113272
Lhx5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0113272
Dbx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011464
Dlx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0165584
Pou2f3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011632799999999999
Pou2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0330994
metacluster_0/pattern_70.0557765
Tlx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011684100000000001
Barx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012050100000000001
Dlx4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012050100000000001
Duxbl1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0200376
Hoxa7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0258947
Lhx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0124282
Dbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0124788
Pou6f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.018684700000000002
Barx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.013719899999999998
Hoxb7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.014368899999999999
Hoxc10
Pattern NameModiscoSignificance
metacluster_0/pattern_00.015160299999999998
Hoxa4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.015282599999999999
Dlx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.018406400000000003
Isl1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.04408309999999999
Isl2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0167867
Hoxc9
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0169137
Hmx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0178763
Nanog
Pattern NameModiscoSignificance
metacluster_0/pattern_00.044730400000000003
metacluster_0/pattern_60.0412411
metacluster_0/pattern_70.00578739
Hoxc8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.019309
Pou4f3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.019309
Hoxd13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.028302099999999997
Hnf1b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.020065700000000002
Nkx3-2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.021049900000000003
Arid3b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.023885
Hnf1a
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0258947
Dlx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.028302099999999997
Nkx3-1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.032468000000000004
Pou3f4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.026827800000000002
Hmbox1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0272877
A1JVI6_MOUSE
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0272877
Hoxb6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0277046
Hoxa13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.028302099999999997
Hoxc13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0298179
Hoxc4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0307356
Hoxa9
Pattern NameModiscoSignificance
metacluster_0/pattern_00.034726599999999996
Hoxb13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.03497569999999999
Hoxa10
Pattern NameModiscoSignificance
metacluster_0/pattern_00.03579280000000001
Cdx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.03735530000000001
Hoxd8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0378847
Hoxd10
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0397185
Hmx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0397185
Hoxd9
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0409713
Twist1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058830999999999994
Cdx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058830999999999994
Nkx2-3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058830999999999994
Hoxa11
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058839199999999994
Nfia
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000413781
Nfib
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00198568
Nfic
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0591011
Neurod2
Pattern NameModiscoSignificance
metacluster_0/pattern_22.9969100000000003e-07
Atoh1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0160636
Neurod1
Pattern NameModiscoSignificance
metacluster_0/pattern_21.79163e-06
Neurog2
Pattern NameModiscoSignificance
metacluster_0/pattern_21.79163e-06
Olig2
Pattern NameModiscoSignificance
metacluster_0/pattern_26.74047e-05
Lyl1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000398465
Ptf1a
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0184877
metacluster_0/pattern_90.0339549
Bhlha15
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00703216
Tcf21
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00532617
Ascl1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.047767199999999996
Myog
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00808333
Tcf12
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00808333
Ascl2
Pattern NameModiscoSignificance
metacluster_0/pattern_20.019853799999999998
Tal1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00703216
Bhlhe22
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00703216
Msc
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00790497
Myod1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0184877
Neurog1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0104446
Msgn1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.011657899999999999
Tfap4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.026354200000000005
Tcf3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.026354200000000005
Myf5
Pattern NameModiscoSignificance
metacluster_0/pattern_20.030998400000000002
Myb
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0448477
Myf6
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0549001
Sp2
Pattern NameModiscoSignificance
metacluster_0/pattern_31.21177e-05
metacluster_0/pattern_42.49713e-10
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_110.00283858
metacluster_0/pattern_130.00819488
metacluster_0/pattern_142.11184e-06
Sp3
Pattern NameModiscoSignificance
metacluster_0/pattern_37.212680000000001e-05
metacluster_0/pattern_42.49713e-10
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_110.0246391
metacluster_0/pattern_130.0271119
metacluster_0/pattern_143.17956e-05
Zfx
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000211499
metacluster_0/pattern_110.0406019
metacluster_0/pattern_130.0271119
metacluster_0/pattern_140.00137846
Sp1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000211499
metacluster_0/pattern_40.000684273
metacluster_0/pattern_90.028952600000000002
metacluster_0/pattern_110.0246391
metacluster_0/pattern_145.03176e-05
Usf2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000580704
metacluster_0/pattern_130.019641400000000003
Mxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00172067
metacluster_0/pattern_130.0182263
metacluster_0/pattern_140.0254612
Klf3
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00285412
metacluster_0/pattern_41.0917100000000001e-06
metacluster_0/pattern_90.000197835
metacluster_0/pattern_110.058931700000000004
metacluster_0/pattern_140.00966447
Zbtb17
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00881319
metacluster_0/pattern_40.0004910919999999999
metacluster_0/pattern_97.9582e-09
metacluster_0/pattern_140.00620648
Rfx1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.009302
metacluster_0/pattern_82.7323e-06
metacluster_0/pattern_130.023681599999999997
metacluster_0/pattern_140.00540801
Ctcfl
Pattern NameModiscoSignificance
metacluster_0/pattern_30.038607300000000004
metacluster_0/pattern_52.90586e-07
metacluster_0/pattern_140.0397565
Myc
Pattern NameModiscoSignificance
metacluster_0/pattern_30.05194680000000001
Sp4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00171481
metacluster_0/pattern_90.00759039
metacluster_0/pattern_140.0444791
Klf5
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0004910919999999999
metacluster_0/pattern_90.000826154
Klf6
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0004910919999999999
metacluster_0/pattern_90.00759039
metacluster_0/pattern_140.0444791
Klf4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.022841099999999996
metacluster_0/pattern_90.0016074000000000001
Sp5
Pattern NameModiscoSignificance
metacluster_0/pattern_40.000530884
metacluster_0/pattern_91.4112000000000001e-06
metacluster_0/pattern_140.0153236
Wt1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.000566175
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_140.00540801
E2f4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0007055130000000001
metacluster_0/pattern_90.0408883
Egr1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0319354
metacluster_0/pattern_90.00298553
metacluster_0/pattern_140.0444791
Klf7
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00148535
Maz
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00148535
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_140.00780204
Klf8
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00322567
Zfp281
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00390771
metacluster_0/pattern_90.0086605
Klf12
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00364749
E2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00390771
metacluster_0/pattern_90.0192815
Egr2
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00390771
metacluster_0/pattern_90.019275599999999997
metacluster_0/pattern_140.0209903
Klf15
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00760206
metacluster_0/pattern_91.95821e-06
metacluster_0/pattern_140.0271278
Srebf2
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0232524
metacluster_0/pattern_90.029340300000000003
metacluster_0/pattern_130.0482846
Sall4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0334659
metacluster_0/pattern_90.0161532
Klf1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0466816
Egr3
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0466816
Ctcf
Pattern NameModiscoSignificance
metacluster_0/pattern_51.266e-14
Sox3
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00142796
Sox9
Pattern NameModiscoSignificance
metacluster_0/pattern_64.49233e-05
Sox4
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0210546
Sox2
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00142796
metacluster_0/pattern_70.028594900000000003
Sox17
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00276927
Sox6
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00950671
Lef1
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0412411
Tcf7
Pattern NameModiscoSignificance
metacluster_0/pattern_60.054702
Pou5f1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.028594900000000003
Rfx2
Pattern NameModiscoSignificance
metacluster_0/pattern_81.2966200000000001e-06
Rfx3
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0184326
Rfx4
Pattern NameModiscoSignificance
metacluster_0/pattern_86.36065e-05
Rfx7
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00866966
Rfx6
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0183455
Rela
Pattern NameModiscoSignificance
metacluster_0/pattern_90.000417974
Bcl6
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0016074000000000001
Elf5
Pattern NameModiscoSignificance
metacluster_0/pattern_90.00759039
metacluster_0/pattern_100.00842873
E2f7
Pattern NameModiscoSignificance
metacluster_0/pattern_90.028952600000000002
Ets2
Pattern NameModiscoSignificance
metacluster_0/pattern_90.028952600000000002
Zscan10
Pattern NameModiscoSignificance
metacluster_0/pattern_90.05785030000000001
E2f6
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0480651
Gata1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0485449
E2f3
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0485449
Gabpa
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Elf1
Pattern NameModiscoSignificance
metacluster_0/pattern_107.8239e-07
Fli1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00502898
Elk1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Elk4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00482896
Erg
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00482896
Elk3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Ets1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00591184
Fev
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0028874
Etv5
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00301077
Etv1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00394662
Elf2
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00994629
Etv4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00538311
Etv6
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Elf4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00469945
Ehf
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00482896
Etv3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.006462999999999999
XP_911724.4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.006462999999999999
Spi1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0531618
Elf3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0193774
Etv2
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0193774
Spdef
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0377866
Spic
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0531618
Spib
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0531618
Nrf1
Pattern NameModiscoSignificance
metacluster_0/pattern_111.4734000000000002e-05
Nfyb
Pattern NameModiscoSignificance
metacluster_0/pattern_122.07665e-12
Nfyc
Pattern NameModiscoSignificance
metacluster_0/pattern_129.06889e-09
Nfya
Pattern NameModiscoSignificance
metacluster_0/pattern_122.81087e-08
Foxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_122.2153e-06
Pbx3
Pattern NameModiscoSignificance
metacluster_0/pattern_125.81756e-06
Creb1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00784169
Atf7
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00456863
Atf2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00911269
Atf1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.047818
Crem
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0418266
Usf1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00119849
Tfec
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0154733
Tfe3
Pattern NameModiscoSignificance
metacluster_0/pattern_130.016128999999999998
Jdp2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0062496
Srebf1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.010968
Atf3
Pattern NameModiscoSignificance
metacluster_0/pattern_130.025287200000000003
Bhlhe40
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0584085
Mitf
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0093829
Tfeb
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00819488
Mlx
Pattern NameModiscoSignificance
metacluster_0/pattern_130.021033
Creb5
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00819488
Arntl
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0345204
Fosl2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0114161
Clock
Pattern NameModiscoSignificance
metacluster_0/pattern_130.016128999999999998
Rxrb
Pattern NameModiscoSignificance
metacluster_0/pattern_130.024486599999999997
Creb3l2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0433494
Xbp1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.051965599999999994
Taf1
Pattern NameModiscoSignificance
metacluster_0/pattern_144.05836e-06
Yy1
Pattern NameModiscoSignificance
metacluster_0/pattern_142.5910900000000003e-05
Zfp42
Pattern NameModiscoSignificance
metacluster_0/pattern_140.0131528
Thap11
Pattern NameModiscoSignificance
metacluster_0/pattern_157.04458e-18
Zfp143
Pattern NameModiscoSignificance
metacluster_0/pattern_152.0847399999999996e-17
Tbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_156.047869999999999e-14
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #166
TF NameModiscoHomer
Vsx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00033555900000000003
Pattern NameHomerSignificance
motif2.motif0.00483241
Alx4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012050100000000001
Pattern NameHomerSignificance
motif2.motif0.00537413
Etv4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00538311
Pattern NameHomerSignificance
motif19.motif0.0123142
Msx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00513543
Pattern NameHomerSignificance
motif2.motif0.00557815
Lhx6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0252043
Pattern NameHomerSignificance
motif2.motif0.00698119
Zfp143
Pattern NameModiscoSignificance
metacluster_0/pattern_152.0847399999999996e-17
Pattern NameHomerSignificance
motif11.motif2.72071e-07
Msc
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00790497
Pattern NameHomerSignificance
motif13.motif0.00177863
Mnx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00392025
Pattern NameHomerSignificance
motif2.motif0.013830100000000001
Rxrb
Pattern NameModiscoSignificance
metacluster_0/pattern_130.024486599999999997
Pattern NameHomerSignificance
motif21.motif0.0245973
Prrx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00475141
Pattern NameHomerSignificance
motif2.motif0.025925200000000002
Elf1
Pattern NameModiscoSignificance
metacluster_0/pattern_107.8239e-07
Pattern NameHomerSignificance
motif19.motif0.00168003
Elk3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Pattern NameHomerSignificance
motif19.motif0.0085439
Klf6
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0004910919999999999
metacluster_0/pattern_90.00759039
metacluster_0/pattern_140.0444791
Pattern NameHomerSignificance
motif5.motif0.0255588
Neurog2
Pattern NameModiscoSignificance
metacluster_0/pattern_21.79163e-06
Pattern NameHomerSignificance
motif13.motif0.00757158
Nanog
Pattern NameModiscoSignificance
metacluster_0/pattern_00.044730400000000003
metacluster_0/pattern_60.0412411
metacluster_0/pattern_70.00578739
Pattern NameHomerSignificance
motif2.motif0.029170299999999996
Tfeb
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00819488
Pattern NameHomerSignificance
motif21.motif0.0549446
Vax1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00237015
Pattern NameHomerSignificance
motif2.motif0.00307186
Pou2f3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011632799999999999
Pattern NameHomerSignificance
motif2.motif0.022199200000000002
Hoxa4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.015282599999999999
Pattern NameHomerSignificance
motif2.motif0.0579871
Meox2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0101461
Pattern NameHomerSignificance
motif2.motif0.0579871
Msgn1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.011657899999999999
Pattern NameHomerSignificance
motif13.motif0.02072
Atf2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00911269
Pattern NameHomerSignificance
motif21.motif0.0328995
Srebf1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.010968
Pattern NameHomerSignificance
motif21.motif0.0549446
Nkx6-1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0409713
Pattern NameHomerSignificance
motif2.motif0.04298180000000001
Shox2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000844413
Pattern NameHomerSignificance
motif2.motif0.00307186
Emx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00149784
Pattern NameHomerSignificance
motif2.motif0.00190072
Nfia
Pattern NameModiscoSignificance
metacluster_0/pattern_10.000413781
Pattern NameHomerSignificance
motif16.motif0.0145959
Barhl1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.010789100000000001
Pattern NameHomerSignificance
motif2.motif0.0157649
Dbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0124788
Pattern NameHomerSignificance
motif2.motif0.0331361
E2f7
Pattern NameModiscoSignificance
metacluster_0/pattern_90.028952600000000002
Pattern NameHomerSignificance
motif15.motif0.00755563
Klf4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.022841099999999996
metacluster_0/pattern_90.0016074000000000001
Pattern NameHomerSignificance
motif5.motif0.0008611939999999999
Noto
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Pattern NameHomerSignificance
motif2.motif0.00217944
Lhx4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Pattern NameHomerSignificance
motif2.motif0.00633573
Lbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.000768605
Pattern NameHomerSignificance
motif2.motif0.00403467
Nfyb
Pattern NameModiscoSignificance
metacluster_0/pattern_122.07665e-12
Pattern NameHomerSignificance
motif2.motif0.017637
Klf8
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00322567
Pattern NameHomerSignificance
motif5.motif0.000989657
Evx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Pattern NameHomerSignificance
motif2.motif0.00326523
Pax6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00033555900000000003
Pattern NameHomerSignificance
motif2.motif0.00739831
Creb1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00784169
Pattern NameHomerSignificance
motif21.motif0.0269327
Rfx6
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0183455
Pattern NameHomerSignificance
motif8.motif0.0120965
Pdx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0102555
Pattern NameHomerSignificance
motif2.motif0.00956293
XP_911724.4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.006462999999999999
Pattern NameHomerSignificance
motif19.motif0.0175898
Lmx1a
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Pattern NameHomerSignificance
motif2.motif0.0568389
Elk4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00482896
Pattern NameHomerSignificance
motif19.motif0.0129267
Neurod1
Pattern NameModiscoSignificance
metacluster_0/pattern_21.79163e-06
Pattern NameHomerSignificance
motif13.motif0.00165175
Hoxa1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
Pattern NameHomerSignificance
motif2.motif0.00339586
Klf12
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00364749
Pattern NameHomerSignificance
motif5.motif0.020340200000000003
Bhlhe22
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00703216
Pattern NameHomerSignificance
motif13.motif0.00152689
Gabpa
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Pattern NameHomerSignificance
motif19.motif0.00928812
Lhx9
Pattern NameModiscoSignificance
metacluster_0/pattern_07.3724e-05
Pattern NameHomerSignificance
motif2.motif0.00307186
Lhx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0124282
Pattern NameHomerSignificance
motif2.motif0.0579871
Vax2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00182567
Pattern NameHomerSignificance
motif2.motif0.00263797
Jdp2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0062496
Pattern NameHomerSignificance
motif21.motif0.0558581
Nkx1-2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00196758
Pattern NameHomerSignificance
motif2.motif0.0019278
Elf4
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00469945
Pattern NameHomerSignificance
motif19.motif0.0104802
Hoxa2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Pattern NameHomerSignificance
motif2.motif0.00571133
Rax
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
Pattern NameHomerSignificance
motif2.motif0.00190072
Rfx2
Pattern NameModiscoSignificance
metacluster_0/pattern_81.2966200000000001e-06
Pattern NameHomerSignificance
motif8.motif1.29407e-05
Etv1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00394662
Pattern NameHomerSignificance
motif19.motif0.0099006
Bhlha15
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00703216
Pattern NameHomerSignificance
motif13.motif0.00110117
Sp3
Pattern NameModiscoSignificance
metacluster_0/pattern_37.212680000000001e-05
metacluster_0/pattern_42.49713e-10
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_110.0246391
metacluster_0/pattern_130.0271119
metacluster_0/pattern_143.17956e-05
Pattern NameHomerSignificance
motif5.motif0.000428486
E2f6
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0480651
Pattern NameHomerSignificance
motif15.motif0.0290339
Klf1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0466816
Pattern NameHomerSignificance
motif5.motif0.0368269
Phox2a
Pattern NameModiscoSignificance
metacluster_0/pattern_00.006379999999999999
Pattern NameHomerSignificance
motif2.motif0.053382000000000006
Dlx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.028302099999999997
Pattern NameHomerSignificance
motif2.motif0.0579871
Gbx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.006379999999999999
Pattern NameHomerSignificance
motif2.motif0.0019278
Hoxa6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0113272
Pattern NameHomerSignificance
motif2.motif0.0579871
Evx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011034799999999999
Pattern NameHomerSignificance
motif2.motif0.00290375
Thap11
Pattern NameModiscoSignificance
metacluster_0/pattern_157.04458e-18
Pattern NameHomerSignificance
motif11.motif4.3556099999999995e-08
Elf2
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00994629
Pattern NameHomerSignificance
motif19.motif0.0099006
Nobox
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Pattern NameHomerSignificance
motif2.motif0.0130923
Rfx3
Pattern NameModiscoSignificance
metacluster_0/pattern_80.0184326
Pattern NameHomerSignificance
motif8.motif0.016971299999999998
Tfec
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0154733
Pattern NameHomerSignificance
motif21.motif0.0558581
Sp2
Pattern NameModiscoSignificance
metacluster_0/pattern_31.21177e-05
metacluster_0/pattern_42.49713e-10
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_110.00283858
metacluster_0/pattern_130.00819488
metacluster_0/pattern_142.11184e-06
Pattern NameHomerSignificance
motif5.motif0.0008611939999999999
Esx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Pattern NameHomerSignificance
motif2.motif0.00518729
Pax4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Pattern NameHomerSignificance
motif2.motif0.0314047
Elf3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0193774
Pattern NameHomerSignificance
motif19.motif0.046645099999999995
Egr1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0319354
metacluster_0/pattern_90.00298553
metacluster_0/pattern_140.0444791
Pattern NameHomerSignificance
motif5.motif0.017274200000000003
Hoxc8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.019309
Pattern NameHomerSignificance
motif2.motif0.0579871
Alx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Pattern NameHomerSignificance
motif2.motif0.00403467
Hoxd3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00258336
Pattern NameHomerSignificance
motif2.motif0.014850899999999998
Hoxb5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Pattern NameHomerSignificance
motif2.motif0.00698119
Phox2b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00481806
Pattern NameHomerSignificance
motif2.motif0.00190072
Gsx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
Pattern NameHomerSignificance
motif2.motif0.00282453
Pou3f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0307356
Pattern NameHomerSignificance
motif2.motif0.0314679
Tfe3
Pattern NameModiscoSignificance
metacluster_0/pattern_130.016128999999999998
Pattern NameHomerSignificance
motif21.motif0.0549446
Etv2
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0193774
Pattern NameHomerSignificance
motif19.motif0.00928812
Prrx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0036217
Pattern NameHomerSignificance
motif2.motif0.0019278
Crem
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0418266
Pattern NameHomerSignificance
motif21.motif0.022772999999999998
Lhx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00268293
Pattern NameHomerSignificance
motif2.motif0.00339586
Prop1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.027780799999999998
Pattern NameHomerSignificance
motif2.motif0.00739831
Arx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00811861
Pattern NameHomerSignificance
motif2.motif0.00282453
Uncx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0017565999999999999
Pattern NameHomerSignificance
motif2.motif0.0579871
Lhx8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Pattern NameHomerSignificance
motif2.motif0.00369074
Barhl2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00789525
Pattern NameHomerSignificance
motif2.motif0.030482299999999997
Etv5
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00301077
Pattern NameHomerSignificance
motif19.motif0.00549379
Erg
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00482896
Pattern NameHomerSignificance
motif19.motif0.0144766
Arntl
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0345204
Pattern NameHomerSignificance
motif21.motif0.0558581
Pou2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0330994
metacluster_0/pattern_70.0557765
Pattern NameHomerSignificance
motif2.motif0.029170299999999996
Usf1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00119849
Pattern NameHomerSignificance
motif21.motif0.0549446
Etv6
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Pattern NameHomerSignificance
motif19.motif0.013680200000000002
Klf7
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00148535
Pattern NameHomerSignificance
motif5.motif0.0008611939999999999
Nrf1
Pattern NameModiscoSignificance
metacluster_0/pattern_111.4734000000000002e-05
Pattern NameHomerSignificance
motif17.motif4.67609e-05
Rfx1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.009302
metacluster_0/pattern_82.7323e-06
metacluster_0/pattern_130.023681599999999997
metacluster_0/pattern_140.00540801
Pattern NameHomerSignificance
motif8.motif2.85962e-05
Lmx1b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00754865
Pattern NameHomerSignificance
motif2.motif0.027529599999999998
Elk1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00384683
Pattern NameHomerSignificance
motif19.motif0.0085439
Hoxa3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00359054
Pattern NameHomerSignificance
motif2.motif0.013830100000000001
Meox1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.006379999999999999
Pattern NameHomerSignificance
motif2.motif0.022199200000000002
Hoxa7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0258947
Pattern NameHomerSignificance
motif2.motif0.0314679
Fli1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00502898
Pattern NameHomerSignificance
motif19.motif0.0153174
Alx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.040317
Pattern NameHomerSignificance
motif2.motif0.00557815
Olig2
Pattern NameModiscoSignificance
metacluster_0/pattern_26.74047e-05
Pattern NameHomerSignificance
motif13.motif0.0251725
Fev
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0028874
Pattern NameHomerSignificance
motif19.motif0.00630139
Isl1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.04408309999999999
Pattern NameHomerSignificance
motif2.motif0.0246218
Sp1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000211499
metacluster_0/pattern_40.000684273
metacluster_0/pattern_90.028952600000000002
metacluster_0/pattern_110.0246391
metacluster_0/pattern_145.03176e-05
Pattern NameHomerSignificance
motif5.motif0.010068899999999999
Pbx3
Pattern NameModiscoSignificance
metacluster_0/pattern_125.81756e-06
Pattern NameHomerSignificance
motif2.motif0.0331361
Rhox6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00171052
Pattern NameHomerSignificance
motif2.motif0.00596167
Ctcf
Pattern NameModiscoSignificance
metacluster_0/pattern_51.266e-14
Pattern NameHomerSignificance
motif1.motif2.24811e-05
E2f1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00390771
metacluster_0/pattern_90.0192815
Pattern NameHomerSignificance
motif5.motif0.034123400000000005
motif15.motif0.00755563
Neurog1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0104446
Pattern NameHomerSignificance
motif13.motif0.00110076
Ets1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00591184
Pattern NameHomerSignificance
motif19.motif0.0175898
Dlx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.018406400000000003
Pattern NameHomerSignificance
motif2.motif0.0371127
Hoxb3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Pattern NameHomerSignificance
motif2.motif0.00555467
Hoxd1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00574045
Pattern NameHomerSignificance
motif2.motif0.00394141
Dlx5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00681362
Pattern NameHomerSignificance
motif2.motif0.017799000000000002
Hoxa5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00342094
Pattern NameHomerSignificance
motif2.motif0.00753212
Lhx5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0113272
Pattern NameHomerSignificance
motif2.motif0.053124199999999996
Lhx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.031758999999999996
Pattern NameHomerSignificance
motif2.motif0.00690757
Pou6f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.018684700000000002
Pattern NameHomerSignificance
motif2.motif0.0579871
Tcf21
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00532617
Pattern NameHomerSignificance
motif13.motif0.00235794
Tbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_156.047869999999999e-14
Pattern NameHomerSignificance
motif11.motif3.13047e-05
Isx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0091789
Pattern NameHomerSignificance
motif2.motif0.00258112
Vsx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00325624
Pattern NameHomerSignificance
motif2.motif0.00339586
Dlx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0165584
Pattern NameHomerSignificance
motif2.motif0.035774400000000005
Isl2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0167867
Pattern NameHomerSignificance
motif2.motif0.038518000000000004
Otp
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00428639
Pattern NameHomerSignificance
motif2.motif0.00282453
Bsx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00494004
Pattern NameHomerSignificance
motif2.motif0.033021499999999995
Atoh1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0160636
Pattern NameHomerSignificance
motif13.motif0.0192426
Barx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012050100000000001
Pattern NameHomerSignificance
motif2.motif0.0079633
En2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00448842
Pattern NameHomerSignificance
motif2.motif0.00326523
Etv3
Pattern NameModiscoSignificance
metacluster_0/pattern_100.006462999999999999
Pattern NameHomerSignificance
motif19.motif0.0186111
Hoxc5
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Pattern NameHomerSignificance
motif2.motif0.022199200000000002
Atf7
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00456863
Pattern NameHomerSignificance
motif21.motif0.0558581
Spi1
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0531618
Pattern NameHomerSignificance
motif19.motif0.046645099999999995
Atf1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.047818
Pattern NameHomerSignificance
motif21.motif0.00524295
Ctcfl
Pattern NameModiscoSignificance
metacluster_0/pattern_30.038607300000000004
metacluster_0/pattern_52.90586e-07
metacluster_0/pattern_140.0397565
Pattern NameHomerSignificance
motif1.motif0.0005247990000000001
Twist1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058830999999999994
Pattern NameHomerSignificance
motif13.motif0.0461893
Nkx1-1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00297972
Pattern NameHomerSignificance
motif2.motif0.0019278
Pax7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.026535800000000002
Pattern NameHomerSignificance
motif2.motif0.047439499999999996
Sp4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00171481
metacluster_0/pattern_90.00759039
metacluster_0/pattern_140.0444791
Pattern NameHomerSignificance
motif5.motif0.0255588
Rfx7
Pattern NameModiscoSignificance
metacluster_0/pattern_80.00866966
Pattern NameHomerSignificance
motif8.motif0.00797274
Creb5
Pattern NameModiscoSignificance
metacluster_0/pattern_130.00819488
Pattern NameHomerSignificance
motif21.motif0.029608600000000002
Sox9
Pattern NameModiscoSignificance
metacluster_0/pattern_64.49233e-05
Pattern NameHomerSignificance
motif9.motif0.0477088
En1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00251419
Pattern NameHomerSignificance
motif2.motif0.00333641
Ehf
Pattern NameModiscoSignificance
metacluster_0/pattern_100.00482896
Pattern NameHomerSignificance
motif19.motif0.0175898
Lyl1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.000398465
Pattern NameHomerSignificance
motif13.motif0.0407228
Neurod2
Pattern NameModiscoSignificance
metacluster_0/pattern_22.9969100000000003e-07
Pattern NameHomerSignificance
motif13.motif0.00177863
Elf5
Pattern NameModiscoSignificance
metacluster_0/pattern_90.00759039
metacluster_0/pattern_100.00842873
Pattern NameHomerSignificance
motif19.motif0.0295575
Rfx4
Pattern NameModiscoSignificance
metacluster_0/pattern_86.36065e-05
Pattern NameHomerSignificance
motif8.motif0.000100654
Klf3
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00285412
metacluster_0/pattern_41.0917100000000001e-06
metacluster_0/pattern_90.000197835
metacluster_0/pattern_110.058931700000000004
metacluster_0/pattern_140.00966447
Pattern NameHomerSignificance
motif5.motif0.00186529
Gbx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00673965
Pattern NameHomerSignificance
motif2.motif0.00518729
Klf5
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0004910919999999999
metacluster_0/pattern_90.000826154
Pattern NameHomerSignificance
motif5.motif0.020887400000000004
Msx3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0221164
Pattern NameHomerSignificance
motif2.motif0.00571133
Msx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00462161
Pattern NameHomerSignificance
motif2.motif0.00633817
Pou1f1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0277046
Pattern NameHomerSignificance
motif2.motif0.00352284
E2f4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0007055130000000001
metacluster_0/pattern_90.0408883
Pattern NameHomerSignificance
motif5.motif0.00257108
Unique TF-MoDISco TFs: #100
TF NameModiscoHomer
Barx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.013719899999999998
Absent
Hoxc9
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0169137
Absent
Myf6
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0549001
Absent
Dbx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011464
Absent
Hoxb6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0277046
Absent
A1JVI6_MOUSE
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0272877
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00390771
metacluster_0/pattern_90.0086605
Absent
Ets2
Pattern NameModiscoSignificance
metacluster_0/pattern_90.028952600000000002
Absent
Nkx6-3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00512101
Absent
Srebf2
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0232524
metacluster_0/pattern_90.029340300000000003
metacluster_0/pattern_130.0482846
Absent
Gata1
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0485449
Absent
Nkx3-1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.032468000000000004
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00760206
metacluster_0/pattern_91.95821e-06
metacluster_0/pattern_140.0271278
Absent
Myc
Pattern NameModiscoSignificance
metacluster_0/pattern_30.05194680000000001
Absent
Arid3b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.023885
Absent
Hoxa9
Pattern NameModiscoSignificance
metacluster_0/pattern_00.034726599999999996
Absent
Lef1
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0412411
Absent
Clock
Pattern NameModiscoSignificance
metacluster_0/pattern_130.016128999999999998
Absent
Ascl2
Pattern NameModiscoSignificance
metacluster_0/pattern_20.019853799999999998
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0093829
Absent
Egr3
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0466816
Absent
Myod1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0184877
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000580704
metacluster_0/pattern_130.019641400000000003
Absent
Nkx2-3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058830999999999994
Absent
Sox6
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00950671
Absent
Duxbl1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0200376
Absent
Ascl1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.047767199999999996
Absent
Hoxb13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.03497569999999999
Absent
Spdef
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0377866
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00172067
metacluster_0/pattern_130.0182263
metacluster_0/pattern_140.0254612
Absent
Sebox
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00161743
Absent
Zbtb17
Pattern NameModiscoSignificance
metacluster_0/pattern_30.00881319
metacluster_0/pattern_40.0004910919999999999
metacluster_0/pattern_97.9582e-09
metacluster_0/pattern_140.00620648
Absent
Myf5
Pattern NameModiscoSignificance
metacluster_0/pattern_20.030998400000000002
Absent
Hmbox1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0272877
Absent
Taf1
Pattern NameModiscoSignificance
metacluster_0/pattern_144.05836e-06
Absent
Rela
Pattern NameModiscoSignificance
metacluster_0/pattern_90.000417974
Absent
Tcf12
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00808333
Absent
Cdx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.03735530000000001
Absent
Hoxd10
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0397185
Absent
Nfyc
Pattern NameModiscoSignificance
metacluster_0/pattern_129.06889e-09
Absent
Spib
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0531618
Absent
Pou2f2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00735844
metacluster_0/pattern_70.00424612
Absent
Yy1
Pattern NameModiscoSignificance
metacluster_0/pattern_142.5910900000000003e-05
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00390771
metacluster_0/pattern_90.019275599999999997
metacluster_0/pattern_140.0209903
Absent
Hoxd8
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0378847
Absent
Sall4
Pattern NameModiscoSignificance
metacluster_0/pattern_40.0334659
metacluster_0/pattern_90.0161532
Absent
Spic
Pattern NameModiscoSignificance
metacluster_0/pattern_100.0531618
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_0/pattern_130.021033
Absent
Foxi1
Pattern NameModiscoSignificance
metacluster_0/pattern_122.2153e-06
Absent
Hoxc13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0298179
Absent
Dlx4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.012050100000000001
Absent
Tlx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.011684100000000001
Absent
Hoxd13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.028302099999999997
Absent
Hoxa10
Pattern NameModiscoSignificance
metacluster_0/pattern_00.03579280000000001
Absent
Hoxd9
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0409713
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_0/pattern_10.0591011
Absent
Ptf1a
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0184877
metacluster_0/pattern_90.0339549
Absent
Hnf1b
Pattern NameModiscoSignificance
metacluster_0/pattern_00.020065700000000002
Absent
Sox4
Pattern NameModiscoSignificance
metacluster_0/pattern_60.0210546
Absent
Fosl2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0114161
Absent
Hoxc4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0307356
Absent
Pou3f2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00868966
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_0/pattern_130.025287200000000003
Absent
Hmx1
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0397185
Absent
Tfap4
Pattern NameModiscoSignificance
metacluster_0/pattern_20.026354200000000005
Absent
Nkx3-2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.021049900000000003
Absent
Zscan10
Pattern NameModiscoSignificance
metacluster_0/pattern_90.05785030000000001
Absent
Hoxc10
Pattern NameModiscoSignificance
metacluster_0/pattern_00.015160299999999998
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0433494
Absent
Tcf3
Pattern NameModiscoSignificance
metacluster_0/pattern_20.026354200000000005
Absent
E2f3
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0485449
Absent
Hmx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0178763
Absent
Zfp42
Pattern NameModiscoSignificance
metacluster_0/pattern_140.0131528
Absent
Cdx2
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058830999999999994
Absent
Nfya
Pattern NameModiscoSignificance
metacluster_0/pattern_122.81087e-08
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_0/pattern_130.0584085
Absent
Hoxb7
Pattern NameModiscoSignificance
metacluster_0/pattern_00.014368899999999999
Absent
Tal1
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00703216
Absent
Tcf7
Pattern NameModiscoSignificance
metacluster_0/pattern_60.054702
Absent
Myb
Pattern NameModiscoSignificance
metacluster_0/pattern_20.0448477
Absent
Zfx
Pattern NameModiscoSignificance
metacluster_0/pattern_30.000211499
metacluster_0/pattern_110.0406019
metacluster_0/pattern_130.0271119
metacluster_0/pattern_140.00137846
Absent
Hoxa13
Pattern NameModiscoSignificance
metacluster_0/pattern_00.028302099999999997
Absent
Myog
Pattern NameModiscoSignificance
metacluster_0/pattern_20.00808333
Absent
Pou4f3
Pattern NameModiscoSignificance
metacluster_0/pattern_00.019309
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_0/pattern_40.000566175
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_140.00540801
Absent
Pou5f1
Pattern NameModiscoSignificance
metacluster_0/pattern_70.028594900000000003
Absent
Hnf1a
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0258947
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_0/pattern_40.000530884
metacluster_0/pattern_91.4112000000000001e-06
metacluster_0/pattern_140.0153236
Absent
Maz
Pattern NameModiscoSignificance
metacluster_0/pattern_40.00148535
metacluster_0/pattern_99.385049999999999e-07
metacluster_0/pattern_140.00780204
Absent
Pou3f4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.026827800000000002
Absent
Sox3
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00142796
Absent
Sox17
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00276927
Absent
Hoxb4
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0252043
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_0/pattern_10.00198568
Absent
Bcl6
Pattern NameModiscoSignificance
metacluster_0/pattern_90.0016074000000000001
Absent
Hoxc6
Pattern NameModiscoSignificance
metacluster_0/pattern_00.00513543
Absent
Hoxa11
Pattern NameModiscoSignificance
metacluster_0/pattern_00.058839199999999994
Absent
Hlx
Pattern NameModiscoSignificance
metacluster_0/pattern_00.0102555
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_0/pattern_130.051965599999999994
Absent
Sox2
Pattern NameModiscoSignificance
metacluster_0/pattern_60.00142796
metacluster_0/pattern_70.028594900000000003
Absent
Unique Homer TFs: #6
TF NameModiscoHomer
Olig3Absent
Pattern NameHomerSignificance
motif13.motif0.0342755
Zbtb33Absent
Pattern NameHomerSignificance
motif23.motif0.00141944
E2f5Absent
Pattern NameHomerSignificance
motif15.motif0.046489800000000005
Zbtb1Absent
Pattern NameHomerSignificance
motif5.motif0.034123400000000005
Twist2Absent
Pattern NameHomerSignificance
motif13.motif0.00757158
E2f2Absent
Pattern NameHomerSignificance
motif15.motif0.0124824