# Parameters
data_name = "Hinfp"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:11:25,770 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Hinfp: Motif: M08989_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Hinfp

No Cell types only TF-MoDISco finds Hinfp

Unique Cell types only Homer finds Hinfp: #7

Cell type	Modisco	Homer
pErythroblast;A;En	Absent	Pattern: motif15.motif Significance: 0.00177212
T_MLD;TCR_SV40-I_CD8+;D60;A;GEO	Absent	Pattern: motif20.motif Significance: 0.00129769
npES;posterior_delA;E8.5;A;GEO	Absent	Pattern: motif22.motif Significance: 0.000157181
Fr_BRN;P0;D;En	Absent	Pattern: motif13.motif Significance: 0.0538048
Tfh_mut;A;CL	Absent	Pattern: motif14.motif Significance: 0.00139199
pMeg;A;En	Absent	Pattern: motif16.motif Significance: 0.00123338
gamma_delta_TCR_MCR;A;CL	Absent	Pattern: motif16.motif Significance: 0.00139199