# Parameters
data_name = "Tfh_mut;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_25-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_25-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 18:45:25,687 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	Tfh (CD4+CD44+CXCR5+PD1+CD25-) Mut
Cell Group	T cells
Experiment Name	ATAC
Experiment Group	Casellas Lab

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	110985	87324	11.8747	54846739	11489930	0.2096	8237126	0.1502	17931920	0.3271

Modelling Metadata

Metric	Value
auPRC	0.607
Calibrated Recall at 50% FDR	0.214
Number of Positive Examples in Test Data	98428
Number of Negative Examples in Test Data	7972423
Imbalance Ratio in Test Data	0.0122
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #8

Pattern Name	TF Name(s)	Modisco
metacluster_1/pattern_0 # seqlets: 10250 SequenceContrib ScoresHyp_Contrib Scores	Ctcf, Ctcfl
metacluster_1/pattern_1 # seqlets: 932 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_2 # seqlets: 800 SequenceContrib ScoresHyp_Contrib Scores	Etv2, Ets1, Erg, Spi1, Spib, Elk1, Ehf, Etv4, Elf3, Gabpa, Elf1, Etv6, Elk4, Fli1, Elk3, Etv3, Irf4, Irf8, XP_911724.4, Etv1, Etv5, Elf4, Elf2, Spic, Elf5, Fev, Prdm1, Irf3, Spdef
metacluster_1/pattern_3 # seqlets: 791 SequenceContrib ScoresHyp_Contrib Scores	Irf1, Irf2, Stat1, Irf7, Stat2, Irf9, Batf3
metacluster_1/pattern_4 # seqlets: 500 SequenceContrib ScoresHyp_Contrib Scores	Zfp143, Thap11, Tbx2, Stat3
metacluster_1/pattern_5 # seqlets: 40 SequenceContrib ScoresHyp_Contrib Scores	Nrf1, Sp2, Sp3, Sp1, Zfx, Klf3, Wt1, Zic3, Zbtb17, Usf2
metacluster_1/pattern_6 # seqlets: 41 SequenceContrib ScoresHyp_Contrib Scores	Jun, Junb, Jdp2, Jund, Batf, Fosb, Atf3, Fosl2, Fos, Fosl1, Rorc
metacluster_1/pattern_7 # seqlets: 43 SequenceContrib ScoresHyp_Contrib Scores	Nfatc1

Click here for Motifs by TF-MoDISco: #64

TF Name	Pattern(s)
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 1.92306e-13 metacluster_1/pattern_1 1.0689600000000002e-08
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 1.71685e-06 metacluster_1/pattern_1 8.20681e-05 metacluster_1/pattern_5 0.019163
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_2 5.9958000000000004e-05 metacluster_1/pattern_6 0.00901872
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00260671 metacluster_1/pattern_6 0.00901872
Erg	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00260671 metacluster_1/pattern_6 0.0471147
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0443786 metacluster_1/pattern_6 0.00901872
Spib	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000555025 metacluster_1/pattern_3 0.000258129 metacluster_1/pattern_6 0.0554081
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00302179 metacluster_1/pattern_6 0.012615600000000001
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_2 0.032535400000000006 metacluster_1/pattern_6 0.0450191
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00412562 metacluster_1/pattern_6 0.022346099999999997
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0198872
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00463062 metacluster_1/pattern_6 0.018094299999999997
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00108029
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00412562 metacluster_1/pattern_6 0.00753098
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00321563 metacluster_1/pattern_6 0.00901872
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488 metacluster_1/pattern_6 0.0498082
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488 metacluster_1/pattern_3 0.000148936
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488 metacluster_1/pattern_3 3.5524599999999996e-06
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00429437 metacluster_1/pattern_6 0.029944400000000003
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00458344 metacluster_1/pattern_6 0.0241011
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00578157
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.010609799999999999 metacluster_1/pattern_6 0.0140185
Spic	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00898624
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0459528
Fev	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0157139 metacluster_1/pattern_6 0.054488199999999994
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0157139 metacluster_1/pattern_3 9.019059999999999e-05
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.029867900000000003 metacluster_1/pattern_3 0.00017863200000000002
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0520385
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_3 2.3281799999999997e-13
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00401408
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_3 3.5524599999999996e-06
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_3 0.000148936
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.000258129
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00157382
Batf3	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0104521
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_4 3.74502e-18
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_4 3.4176400000000003e-16
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_4 3.20244e-13
Stat3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.0482914
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_5 3.0668700000000003e-06
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_5 6.358520000000001e-05
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00100038
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00145818
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0491976
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0435181
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0435181
Zic3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0463947
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0491976
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0529205
Jun	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00690479 metacluster_1/pattern_7 0.00325769
Junb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0198278 metacluster_1/pattern_7 0.00323972
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00690479 metacluster_1/pattern_7 0.000766095
Jund	Pattern Name Modisco Significance metacluster_1/pattern_6 0.014669799999999998 metacluster_1/pattern_7 0.014245500000000001
Batf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00690479 metacluster_1/pattern_7 0.000766095
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00753098 metacluster_1/pattern_7 0.00141722
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00901872 metacluster_1/pattern_7 0.00325769
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00901872 metacluster_1/pattern_7 0.0112061
Fos	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00901872 metacluster_1/pattern_7 0.00141722
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0145191 metacluster_1/pattern_7 0.0038138000000000004
Rorc	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0445131
Nfatc1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00055478

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #48

TF Name	Modisco	Homer
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_2 5.9958000000000004e-05 metacluster_1/pattern_6 0.00901872	Pattern Name Homer Significance motif3.motif 0.0007600660000000001
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00321563 metacluster_1/pattern_6 0.00901872	Pattern Name Homer Significance motif3.motif 0.0004986000000000001
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0198872	Pattern Name Homer Significance motif3.motif 0.0135506
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488 metacluster_1/pattern_6 0.0498082	Pattern Name Homer Significance motif3.motif 0.000312373
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_5 6.358520000000001e-05	Pattern Name Homer Significance motif2.motif 1.04132e-06
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488	Pattern Name Homer Significance motif3.motif 0.000449116
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488 metacluster_1/pattern_3 0.000148936	Pattern Name Homer Significance motif15.motif 0.0410553
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_3 0.000148936	Pattern Name Homer Significance motif15.motif 0.022623400000000002
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_0 1.92306e-13 metacluster_1/pattern_1 1.0689600000000002e-08	Pattern Name Homer Significance motif1.motif 0.00048559300000000004 motif4.motif 0.025732799999999997
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_3 3.5524599999999996e-06	Pattern Name Homer Significance motif15.motif 0.0229345
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00401408	Pattern Name Homer Significance motif15.motif 0.00537181
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00302179 metacluster_1/pattern_6 0.012615600000000001	Pattern Name Homer Significance motif3.motif 0.000389384
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_4 3.74502e-18	Pattern Name Homer Significance motif6.motif 8.39269e-06
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00429437 metacluster_1/pattern_6 0.029944400000000003	Pattern Name Homer Significance motif3.motif 0.000495343
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00100038	Pattern Name Homer Significance motif2.motif 7.206139999999999e-06
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00157382	Pattern Name Homer Significance motif15.motif 0.0229345
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_4 3.20244e-13	Pattern Name Homer Significance motif6.motif 0.000116485
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0435181	Pattern Name Homer Significance motif2.motif 3.5039e-05
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_2 0.032535400000000006 metacluster_1/pattern_6 0.0450191	Pattern Name Homer Significance motif3.motif 0.00448417
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0157139 metacluster_1/pattern_3 9.019059999999999e-05	Pattern Name Homer Significance motif15.motif 0.00271087
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_3 2.3281799999999997e-13	Pattern Name Homer Significance motif15.motif 0.00106711
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_5 3.0668700000000003e-06	Pattern Name Homer Significance motif12.motif 0.00137589
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488	Pattern Name Homer Significance motif3.motif 0.000862415
Erg	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00260671 metacluster_1/pattern_6 0.0471147	Pattern Name Homer Significance motif3.motif 0.0004986000000000001
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0459528	Pattern Name Homer Significance motif3.motif 0.00822837
Spic	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00898624	Pattern Name Homer Significance motif3.motif 0.0431
Spib	Pattern Name Modisco Significance metacluster_1/pattern_2 0.000555025 metacluster_1/pattern_3 0.000258129 metacluster_1/pattern_6 0.0554081	Pattern Name Homer Significance motif15.motif 0.0229345
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488	Pattern Name Homer Significance motif3.motif 0.000739147
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_2 0.029867900000000003 metacluster_1/pattern_3 0.00017863200000000002	Pattern Name Homer Significance motif15.motif 0.0264845
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0520385	Pattern Name Homer Significance motif3.motif 0.025357499999999998
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.00145818	Pattern Name Homer Significance motif2.motif 0.000403355
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_0 1.71685e-06 metacluster_1/pattern_1 8.20681e-05 metacluster_1/pattern_5 0.019163	Pattern Name Homer Significance motif1.motif 0.000815639
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00260671 metacluster_1/pattern_6 0.00901872	Pattern Name Homer Significance motif3.motif 0.00045563
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0491976	Pattern Name Homer Significance motif2.motif 0.012748899999999999
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.000258129	Pattern Name Homer Significance motif15.motif 0.020796000000000002
Stat3	Pattern Name Modisco Significance metacluster_1/pattern_4 0.0482914	Pattern Name Homer Significance motif3.motif 0.0570342
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0443786 metacluster_1/pattern_6 0.00901872	Pattern Name Homer Significance motif3.motif 0.020174099999999997
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00394488 metacluster_1/pattern_3 3.5524599999999996e-06	Pattern Name Homer Significance motif15.motif 0.022623400000000002
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00463062 metacluster_1/pattern_6 0.018094299999999997	Pattern Name Homer Significance motif3.motif 0.000449116
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00108029	Pattern Name Homer Significance motif3.motif 0.00018130000000000002
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00412562 metacluster_1/pattern_6 0.00753098	Pattern Name Homer Significance motif3.motif 0.0124763
Fev	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0157139 metacluster_1/pattern_6 0.054488199999999994	Pattern Name Homer Significance motif3.motif 0.000466421
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0435181	Pattern Name Homer Significance motif2.motif 0.0224095
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_4 3.4176400000000003e-16	Pattern Name Homer Significance motif6.motif 4.56587e-06
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00412562 metacluster_1/pattern_6 0.022346099999999997	Pattern Name Homer Significance motif3.motif 0.00185884
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00578157	Pattern Name Homer Significance motif3.motif 0.00108612
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00458344 metacluster_1/pattern_6 0.0241011	Pattern Name Homer Significance motif3.motif 0.00018130000000000002
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.010609799999999999 metacluster_1/pattern_6 0.0140185	Pattern Name Homer Significance motif3.motif 0.00376057

Unique TF-MoDISco TFs: #16

TF Name	Modisco	Homer
Batf3	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0104521	Absent
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0529205	Absent
Jun	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00690479 metacluster_1/pattern_7 0.00325769	Absent
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0491976	Absent
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00901872 metacluster_1/pattern_7 0.0112061	Absent
Batf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00690479 metacluster_1/pattern_7 0.000766095	Absent
Zic3	Pattern Name Modisco Significance metacluster_1/pattern_5 0.0463947	Absent
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00901872 metacluster_1/pattern_7 0.00325769	Absent
Fos	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00901872 metacluster_1/pattern_7 0.00141722	Absent
Junb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0198278 metacluster_1/pattern_7 0.00323972	Absent
Nfatc1	Pattern Name Modisco Significance metacluster_1/pattern_7 0.00055478	Absent
Jund	Pattern Name Modisco Significance metacluster_1/pattern_6 0.014669799999999998 metacluster_1/pattern_7 0.014245500000000001	Absent
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00690479 metacluster_1/pattern_7 0.000766095	Absent
Fosb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00753098 metacluster_1/pattern_7 0.00141722	Absent
Fosl1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0145191 metacluster_1/pattern_7 0.0038138000000000004	Absent
Rorc	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0445131	Absent

Unique Homer TFs: #34

TF Name	Modisco	Homer
Klf1	Absent	Pattern Name Homer Significance motif2.motif 0.0140477
Zfp42	Absent	Pattern Name Homer Significance motif22.motif 0.054991099999999994
Klf4	Absent	Pattern Name Homer Significance motif2.motif 0.012748899999999999
E2f6	Absent	Pattern Name Homer Significance motif2.motif 0.047337
Klf15	Absent	Pattern Name Homer Significance motif2.motif 0.030967900000000003
Hinfp	Absent	Pattern Name Homer Significance motif14.motif 0.00139199
Nfkb2	Absent	Pattern Name Homer Significance motif17.motif 0.000600732
Klf7	Absent	Pattern Name Homer Significance motif2.motif 0.00141983
Zbtb33	Absent	Pattern Name Homer Significance motif13.motif 0.00101489
Klf8	Absent	Pattern Name Homer Significance motif2.motif 0.0026035999999999998
Taf1	Absent	Pattern Name Homer Significance motif22.motif 0.0346518
Nfya	Absent	Pattern Name Homer Significance motif9.motif 3.3124299999999997e-07
Egr1	Absent	Pattern Name Homer Significance motif2.motif 0.0124917
Rela	Absent	Pattern Name Homer Significance motif17.motif 0.000600732
Zbtb1	Absent	Pattern Name Homer Significance motif2.motif 0.032326299999999995
Klf6	Absent	Pattern Name Homer Significance motif2.motif 0.00015213
Yy1	Absent	Pattern Name Homer Significance motif22.motif 0.000772989
Foxi1	Absent	Pattern Name Homer Significance motif9.motif 8.92154e-06
Sp4	Absent	Pattern Name Homer Significance motif2.motif 0.0026035999999999998
Pbx3	Absent	Pattern Name Homer Significance motif9.motif 8.71787e-05
Runx3	Absent	Pattern Name Homer Significance motif16.motif 0.0352885
Klf5	Absent	Pattern Name Homer Significance motif2.motif 0.0124917
Rel	Absent	Pattern Name Homer Significance motif17.motif 0.0119479
Nfyb	Absent	Pattern Name Homer Significance motif9.motif 2.1570300000000001e-10
Nfkb1	Absent	Pattern Name Homer Significance motif17.motif 4.76315e-05
Klf12	Absent	Pattern Name Homer Significance motif2.motif 0.00333605
Sp5	Absent	Pattern Name Homer Significance motif2.motif 0.012748899999999999
Sall4	Absent	Pattern Name Homer Significance motif2.motif 0.0203388
E2f7	Absent	Pattern Name Homer Significance motif2.motif 0.012748899999999999
E2f4	Absent	Pattern Name Homer Significance motif2.motif 2.24781e-05
Maz	Absent	Pattern Name Homer Significance motif2.motif 0.0385798
E2f1	Absent	Pattern Name Homer Significance motif2.motif 0.000971828
Relb	Absent	Pattern Name Homer Significance motif17.motif 0.000412734
Nfyc	Absent	Pattern Name Homer Significance motif9.motif 6.09252e-07