# Parameters
data_name = "Esr2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:05:18,323 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Cell type	Modisco	Homer
RTN;D1;D;En	Pattern: metacluster_0/pattern_10 Significance: 0.0586429	Pattern: motif8.motif Significance: 0.0120972
Muller;P12;D;En	Pattern: metacluster_1/pattern_13 Significance: 0.054863999999999996	Pattern: motif9.motif Significance: 0.0456939
Muscle;A;CL	Pattern: metacluster_1/pattern_14 Significance: 0.026270299999999996	Pattern: motif9.motif Significance: 0.028960400000000004

Cell type	Modisco	Homer
naiveCD8;A;CL	Pattern: metacluster_0/pattern_6 Significance: 0.054249599999999995	Absent
wES;FaceP;E14.5;D;En	Pattern: metacluster_0/pattern_9 Significance: 0.0480259	Absent
LRG_INTSTN;8wks;D;En	Pattern: metacluster_1/pattern_12 Significance: 0.051662900000000005	Absent
STMCH;P0;D;En	Pattern: metacluster_1/pattern_5 Significance: 0.041351	Absent
Mast;A;CL	Pattern: metacluster_0/pattern_6 Significance: 0.0415596	Absent
MTR_NRN_MN1;methyl3;D;En	Pattern: metacluster_0/pattern_16 Significance: 0.0194215	Absent
ROD_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_16 Significance: 0.0595394	Absent
GCN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_5 Significance: 0.0433329	Absent
BL_CN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_18 Significance: 0.0569952	Absent
CN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_14 Significance: 0.0285173	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.035624300000000005	Absent
iPV_NRN;A;GEO	Pattern: metacluster_1/pattern_8 Significance: 0.03764869999999999	Absent
ThMS_MEC;Aire++;A;GEO	Pattern: metacluster_1/pattern_8 Significance: 0.0431897	Absent
LRG_INTSTN;A;CL	Pattern: metacluster_0/pattern_8 Significance: 0.0556875	Absent
Melanotrope;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.030542700000000002	Absent
BRN;CRBLM;A;CL	Pattern: metacluster_0/pattern_6 Significance: 0.036095999999999996	Absent
LNG_TRM_HSC;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.032608	Absent
naiveT_SPLND;CD4+;D;GEO	Pattern: metacluster_1/pattern_5 Significance: 0.050836599999999996	Absent
gamma_delta_TCR_M-S-;A;CL	Pattern: metacluster_0/pattern_3 Significance: 0.05215790000000001	Absent
NCR+ILC3;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.034941 / Pattern: metacluster_1/pattern_7 Significance: 0.0557759	Absent
ILC2;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.0512186	Absent
KDNY;P0;D;En	Pattern: metacluster_1/pattern_10 Significance: 0.027496299999999998	Absent
NTRPHL;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.0588062	Absent
LNG;8wks;D;En	Pattern: metacluster_0/pattern_6 Significance: 0.0456069	Absent
RTN;A;GEO	Pattern: metacluster_0/pattern_9 Significance: 0.00916189	Absent
CRBLM;D;En	Pattern: metacluster_1/pattern_14 Significance: 0.0573385	Absent
ILC3;A;GEO	Pattern: metacluster_1/pattern_7 Significance: 0.016734799999999998	Absent
ILC3_AbxGRMFree;A;GEO	Pattern: metacluster_1/pattern_6 Significance: 0.038449199999999996	Absent
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_11 Significance: 0.0215585	Absent