# Parameters
data_name = "Dlx4"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:01:32,584 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Dlx4: Motif: M00409_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Dlx4: #9

Cell type	Modisco	Homer
wES;limb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.00403788	Pattern: motif4.motif Significance: 0.023074200000000003
wES;Hnd_lmb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.00470693	Pattern: motif3.motif Significance: 0.013063900000000002
BCK_SKN;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.013854	Pattern: motif9.motif Significance: 0.0271629
wES.CRNL_NRL_CRST;E10.5;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.0407286	Pattern: motif3.motif Significance: 0.00637937
iVIP_NRN;A;GEO	Pattern: metacluster_1/pattern_6 Significance: 0.035117699999999995	Pattern: motif3.motif Significance: 0.0308822
G_NRN_P;A;GEO	Pattern: metacluster_1/pattern_14 Significance: 0.03448590000000001	Pattern: motif13.motif Significance: 0.03468
Muller;P12;D;En	Pattern: metacluster_1/pattern_5 Significance: 0.0353449	Pattern: motif4.motif Significance: 0.0200856
wES;Hnd_BRN;E14.5;D;En	Pattern: metacluster_0/pattern_8 Significance: 0.0485231	Pattern: motif3.motif Significance: 0.0505097
Md_BRN;D;En	Pattern: metacluster_1/pattern_3 Significance: 0.016813099999999997	Pattern: motif14.motif Significance: 0.0480145

Unique Cell types only TF-MoDISco finds Dlx4: #16

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_25 Significance: 0.039114499999999996	Absent
wES;Fr_lmb;E11.5;D;En	Pattern: metacluster_1/pattern_13 Significance: 0.00476356	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_18 Significance: 0.010260700000000001	Absent
wES;FaceP;E14.5;D;En	Pattern: metacluster_0/pattern_7 Significance: 0.0322059	Absent
npES;posterior_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.00148367	Absent
CRBL_GRNL_Precrsr;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.0212192	Absent
RTN;D1;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.0168942	Absent
wES;RTN;E11.5;D;En	Pattern: metacluster_0/pattern_1 Significance: 0.013743100000000001	Absent
iPV_NRN;A;GEO	Pattern: metacluster_1/pattern_7 Significance: 0.0168565	Absent
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_5 Significance: 0.0215081	Absent
wES;WHL_BRN;E14.5;D;GEO	Pattern: metacluster_0/pattern_0 Significance: 0.012050100000000001	Absent
wES.Fr_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_2 Significance: 0.00583954	Absent
Hnd_BRN;P0;D;En	Pattern: metacluster_1/pattern_6 Significance: 0.0345455	Absent
BL_CN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_18 Significance: 0.050936300000000004	Absent
wES;Md_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_6 Significance: 0.0182263	Absent
wES;WHL_BRN;E14.5;D;En	Pattern: metacluster_1/pattern_0 Significance: 0.00823402	Absent

Unique Cell types only Homer finds Dlx4: #2

Cell type	Modisco	Homer
BRN;OLFTRY_BLB;A;CL	Absent	Pattern: motif7.motif Significance: 0.0498961
Melanotrope;A;GEO	Absent	Pattern: motif17.motif Significance: 0.0272295