# Parameters
data_name = "Dlx1"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:01:12,155 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Dlx1: Motif: M00491_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Dlx1: #17

Cell type	Modisco	Homer
wES;limb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.00669243	Pattern: motif4.motif Significance: 0.0440241
wES;Hnd_lmb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.0105095	Pattern: motif3.motif Significance: 0.0276257
BCK_SKN;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.020127000000000003	Pattern: motif9.motif Significance: 0.021100999999999998
wES.CRNL_NRL_CRST;E10.5;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.0486906	Pattern: motif3.motif Significance: 0.0240568
CRBL_GRNL_Precrsr;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.028869400000000003	Pattern: motif6.motif Significance: 0.0493566
RTN;D1;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.029120499999999997	Pattern: motif2.motif Significance: 0.0267855
wES;RTN;E11.5;D;En	Pattern: metacluster_0/pattern_1 Significance: 0.0410526	Pattern: motif3.motif Significance: 0.026869900000000002
iVIP_NRN;A;GEO	Pattern: metacluster_1/pattern_6 Significance: 0.0359829	Pattern: motif3.motif Significance: 0.0183446
G_NRN_P;A;GEO	Pattern: metacluster_1/pattern_14 Significance: 0.05381609999999999	Pattern: motif13.motif Significance: 0.0248477
Muller;P12;D;En	Pattern: metacluster_1/pattern_5 Significance: 0.057050800000000006	Pattern: motif4.motif Significance: 0.0145689
wES;WHL_BRN;E14.5;D;GEO	Pattern: metacluster_0/pattern_0 Significance: 0.018406400000000003	Pattern: motif2.motif Significance: 0.0371127
wES.Fr_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_2 Significance: 0.017719400000000003	Pattern: motif2.motif Significance: 0.035998199999999994
Fr_BRN;P0;D;En	Pattern: metacluster_1/pattern_10 Significance: 0.0492556	Pattern: motif10.motif Significance: 0.0474391
BL_CN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_18 Significance: 0.05885599999999999	Pattern: motif13.motif Significance: 0.0464502
wES;Md_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_6 Significance: 0.0437168	Pattern: motif6.motif Significance: 0.0535889
Md_BRN;D;En	Pattern: metacluster_1/pattern_3 Significance: 0.033210699999999996	Pattern: motif14.motif Significance: 0.0326649
wES;WHL_BRN;E14.5;D;En	Pattern: metacluster_1/pattern_0 Significance: 0.0115014	Pattern: motif2.motif Significance: 0.0495198

Unique Cell types only TF-MoDISco finds Dlx1: #7

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_25 Significance: 0.059966599999999995	Absent
wES;Fr_lmb;E11.5;D;En	Pattern: metacluster_1/pattern_13 Significance: 0.00753498	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_18 Significance: 0.0388931	Absent
wES;FaceP;E14.5;D;En	Pattern: metacluster_0/pattern_7 Significance: 0.032775599999999995	Absent
npES;posterior_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.00854734	Absent
iPV_NRN;A;GEO	Pattern: metacluster_1/pattern_7 Significance: 0.0317514	Absent
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_5 Significance: 0.0425027	Absent

Unique Cell types only Homer finds Dlx1: #4

Cell type	Modisco	Homer
CN_PHT_RCPTR;A;GEO	Absent	Pattern: motif8.motif Significance: 0.038033
BRN;OLFTRY_BLB;A;CL	Absent	Pattern: motif7.motif Significance: 0.0498961
wES;3rd_Rhmbmr;E8.5;A;GEO	Absent	Pattern: motif16.motif Significance: 0.0482991
Melanotrope;A;GEO	Absent	Pattern: motif17.motif Significance: 0.0218391