# Parameters
data_name = "Cux2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:00:50,714 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Cux2: Motif: M09025_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Cux2

Unique Cell types only TF-MoDISco finds Cux2: #9

Cell type	Modisco	Homer
LVR;8wks;D;En	Pattern: metacluster_0/pattern_6 Significance: 0.018586099999999998	Absent
ES;J1;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.0169755	Absent
ES;F1216;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.040179400000000004	Absent
ES;129SV_Jae_C57BL6J;A;GEO	Pattern: metacluster_1/pattern_6 Significance: 0.0516509	Absent
LVR;8wks;D;GEO	Pattern: metacluster_1/pattern_10 Significance: 0.0203372	Absent
iVIP_NRN;A;GEO	Pattern: metacluster_1/pattern_18 Significance: 0.040367099999999996	Absent
ES;E14;A;CL	Pattern: metacluster_1/pattern_3 Significance: 0.0381123	Absent
ES;ZhBTc4;untreated;A;GEO	Pattern: metacluster_1/pattern_4 Significance: 0.0300404	Absent
npES;ZHBTC4;Brg1fl_fl;untreat;A;GEO	Pattern: metacluster_1/pattern_11 Significance: 0.0456682	Absent

No Cell types only Homer finds Cux2