# Parameters
data_name = "Sohlh2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.modisco_report import call_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-05 12:25:33,597 [WARNING] git-lfs not installed

homer_matches, modisco_matches = call_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=overwrite)

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Sohlh2: Motif: M01733_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Sohlh2

No Cell types only TF-MoDISco finds Sohlh2

Unique Cell types only Homer finds Sohlh2

Cell type	Modisco	Homer
CD4+CD8int TCRhi CD69hi CD24hi (MHCII def mice)	absent	Pattern: m25 Significance: 0.0731888
BMDCs(dendritic cell)	absent	Pattern: m21 Significance: 0.06123390000000001
macrophage	absent	Pattern: m20 Significance: 0.0664287
Tfr (CD4+CD44+CXCR5+PD1+CD25+) MUT	absent	Pattern: m25 Significance: 0.0678709
dendritic cell(100 ng/mL Lipopolysaccharide, 6hours)	absent	Pattern: m21 Significance: 0.0712804
placenta	absent	Pattern: m23 Significance: 0.0665966