# Parameters
data_name = "Q8VHG7_MOUSE"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:30:12,690 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Q8VHG7_MOUSE: Motif: M00529_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Q8VHG7_MOUSE: #3

Cell type	Modisco	Homer
Adipose;D;En	Pattern: metacluster_0/pattern_15 Significance: 0.0130217	Pattern: motif12.motif Significance: 0.0398187
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_12 Significance: 0.00445073	Pattern: motif13.motif Significance: 0.0312888
ENDRM_ESD;A;GEO	Pattern: metacluster_1/pattern_7 Significance: 0.0035239000000000004	Pattern: motif14.motif Significance: 0.016606400000000004

Unique Cell types only TF-MoDISco finds Q8VHG7_MOUSE: #6

Cell type	Modisco	Homer
RTN;D1;D;En	Pattern: metacluster_0/pattern_6 Significance: 0.05334439999999999	Absent
Corticotrope;A;GEO	Pattern: metacluster_0/pattern_13 Significance: 0.026392400000000003	Absent
wES;Hnd_BRN;E11.5;D;En	Pattern: metacluster_0/pattern_12 Significance: 0.00195521	Absent
wES;Md_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_12 Significance: 0.00468474	Absent
npES;3rd_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_10 Significance: 0.00542326	Absent
npES;3rd_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_19 Significance: 0.0173219	Absent

Unique Cell types only Homer finds Q8VHG7_MOUSE: #2

Cell type	Modisco	Homer
RTN;A;GEO	Absent	Pattern: motif2.motif Significance: 0.045603500000000005
GCN_PHT_RCPTR;A;GEO	Absent	Pattern: motif2.motif Significance: 0.0484411