# Parameters
data_name = "Hes2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:10:59,460 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Hes2: Motif: M01734_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Hes2

Unique Cell types only TF-MoDISco finds Hes2: #4

Cell type	Modisco	Homer
DP;A;CL	Pattern: metacluster_1/pattern_10 Significance: 0.048717699999999996	Absent
LNG;8wks;D;En	Pattern: metacluster_0/pattern_11 Significance: 0.047432199999999994	Absent
WHL_BRN;8wks;D;En	Pattern: metacluster_1/pattern_13 Significance: 0.0518649	Absent
KDNY;8wks;D;En	Pattern: metacluster_1/pattern_7 Significance: 0.0499492	Absent

Unique Cell types only Homer finds Hes2: #7

Cell type	Modisco	Homer
ES;F1216;A;GEO	Absent	Pattern: motif19.motif Significance: 0.0458671
wES;posterior;1;E8.5;A;GEO	Absent	Pattern: motif13.motif Significance: 0.0428002
DC;A;En	Absent	Pattern: motif13.motif Significance: 0.0595587
A20;B-lymphoma;D;En	Absent	Pattern: motif13.motif Significance: 0.0137579
DC_LPS;6h;A;GEO	Absent	Pattern: motif12.motif Significance: 0.0472666
Hnd_BRN;P0;D;En	Absent	Pattern: motif16.motif Significance: 0.042670599999999996
Heart;D;En	Absent	Pattern: motif14.motif Significance: 0.0451906