Index of /kundaje/marinovg/oak/various/programs/biopython-1.77/Tests

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory  -  
[TXT]test_translate.py2020-05-24 14:13 3.8K 
[TXT]test_seq.py2020-05-24 14:13 59K 
[TXT]test_samtools_tool.py2020-05-24 14:13 11K 
[TXT]test_raxml_tool.py2020-05-24 14:13 2.2K 
[TXT]test_psw.py2020-05-24 14:13 4.7K 
[TXT]test_prosite2.py2020-05-24 14:13 53K 
[TXT]test_prosite1.py2020-05-24 14:13 193K 
[TXT]test_prodoc.py2020-05-24 14:13 57K 
[TXT]test_phyml_tool.py2020-05-24 14:13 2.3K 
[TXT]test_phenotype_fit.py2020-05-24 14:13 2.4K 
[TXT]test_phenotype.py2020-05-24 14:13 12K 
[TXT]test_pairwise_aligner.py2020-05-24 14:13 84K 
[TXT]test_pairwise2_no_C.py2020-05-24 14:13 815  
[TXT]test_pairwise2.py2020-05-24 14:13 881  
[TXT]test_motifs_online.py2020-05-24 14:13 1.9K 
[TXT]test_motifs.py2020-05-24 14:13 131K 
[TXT]test_mmtf_online.py2020-05-24 14:13 1.1K 
[TXT]test_mmtf.py2020-05-24 14:13 9.9K 
[TXT]test_lowess.py2020-05-24 14:13 1.3K 
[TXT]test_kNN.py2020-05-24 14:13 3.4K 
[TXT]test_geo.py2020-05-24 14:13 257K 
[TXT]test_codonalign.py2020-05-24 14:13 17K 
[TXT]test_cellosaurus.py2020-05-24 14:13 7.2K 
[TXT]test_bgzf.py2020-05-24 14:13 16K 
[TXT]test_align_substitution_matrices.py2020-05-24 14:13 137K 
[TXT]test_align.py2020-05-24 14:13 28K 
[TXT]test_XXmotif_tool.py2020-05-24 14:13 6.0K 
[TXT]test_Wise.py2020-05-24 14:13 2.8K 
[TXT]test_Uniprot.py2020-05-24 14:13 25K 
[TXT]test_UniProt_GOA.py2020-05-24 14:13 6.4K 
[TXT]test_UniGene.py2020-05-24 14:13 74K 
[TXT]test_Tutorial.py2020-05-24 14:13 9.9K 
[TXT]test_TreeConstruction.py2020-05-24 14:13 13K 
[TXT]test_TogoWS.py2020-05-24 14:13 22K 
[TXT]test_TCoffee_tool.py2020-05-24 14:13 6.8K 
[TXT]test_SwissProt.py2020-05-24 14:13 155K 
[TXT]test_SubsMat.py2020-05-24 14:13 80K 
[TXT]test_SffIO.py2020-05-24 14:13 22K 
[TXT]test_Seq_objs.py2020-05-24 14:13 46K 
[TXT]test_SeqUtils.py2020-05-24 14:13 12K 
[TXT]test_SeqRecord.py2020-05-24 14:13 22K 
[TXT]test_SeqIO_write.py2020-05-24 14:13 8.7K 
[TXT]test_SeqIO_online.py2020-05-24 14:13 3.5K 
[TXT]test_SeqIO_index.py2020-05-24 14:13 30K 
[TXT]test_SeqIO_features.py2020-05-24 14:13 56K 
[TXT]test_SeqIO_Xdna.py2020-05-24 14:13 8.1K 
[TXT]test_SeqIO_SnapGene.py2020-05-24 14:13 5.7K 
[TXT]test_SeqIO_SeqXML.py2020-05-24 14:13 9.6K 
[TXT]test_SeqIO_QualityIO.py2020-05-24 14:13 42K 
[TXT]test_SeqIO_PdbIO.py2020-05-24 14:13 7.4K 
[TXT]test_SeqIO_NibIO.py2020-05-24 14:13 2.1K 
[TXT]test_SeqIO_Insdc.py2020-05-24 14:13 4.4K 
[TXT]test_SeqIO_Gck.py2020-05-24 14:13 13K 
[TXT]test_SeqIO_FastaIO.py2020-05-24 14:13 9.6K 
[TXT]test_SeqIO_AbiIO.py2020-05-24 14:13 564K 
[TXT]test_SeqIO.py2020-05-24 14:13 228K 
[TXT]test_SeqFeature.py2020-05-24 14:13 9.6K 
[TXT]test_SearchIO_write.py2020-05-24 14:13 9.2K 
[TXT]test_SearchIO_model.py2020-05-24 14:13 66K 
[TXT]test_SearchIO_legacy.py2020-05-24 14:13 6.2K 
[TXT]test_SearchIO_interproscan_xml.py2020-05-24 14:13 2.7K 
[TXT]test_SearchIO_hmmer3_text_index.py2020-05-24 14:13 18K 
[TXT]test_SearchIO_hmmer3_text.py2020-05-24 14:13 115K 
[TXT]test_SearchIO_hmmer3_tab_index.py2020-05-24 14:13 4.4K 
[TXT]test_SearchIO_hmmer3_tab.py2020-05-24 14:13 20K 
[TXT]test_SearchIO_hmmer3_domtab_index.py2020-05-24 14:13 5.3K 
[TXT]test_SearchIO_hmmer3_domtab.py2020-05-24 14:13 27K 
[TXT]test_SearchIO_hmmer2_text_index.py2020-05-24 14:13 23K 
[TXT]test_SearchIO_hmmer2_text.py2020-05-24 14:13 23K 
[TXT]test_SearchIO_hhsuite2_text.py2020-05-24 14:13 21K 
[TXT]test_SearchIO_fasta_m10_index.py2020-05-24 14:13 2.1K 
[TXT]test_SearchIO_fasta_m10.py2020-05-24 14:13 137K 
[TXT]test_SearchIO_exonerate_vulgar_index.py2020-05-24 14:13 969  
[TXT]test_SearchIO_exonerate_text_index.py2020-05-24 14:13 956  
[TXT]test_SearchIO_exonerate.py2020-05-24 14:13 104K 
[TXT]test_SearchIO_blat_psl_index.py2020-05-24 14:13 2.5K 
[TXT]test_SearchIO_blat_psl.py2020-05-24 14:13 60K 
[TXT]test_SearchIO_blast_xml_index.py2020-05-24 14:13 37K 
[TXT]test_SearchIO_blast_xml.py2020-05-24 14:13 170K 
[TXT]test_SearchIO_blast_text.py2020-05-24 14:13 113K 
[TXT]test_SearchIO_blast_tab_index.py2020-05-24 14:13 9.5K 
[TXT]test_SearchIO_blast_tab.py2020-05-24 14:13 40K 
[TXT]test_SVDSuperimposer.py2020-05-24 14:13 4.3K 
[TXT]test_SCOP_online.py2020-05-24 14:13 637  
[TXT]test_SCOP_Scop.py2020-05-24 14:13 5.4K 
[TXT]test_SCOP_Residues.py2020-05-24 14:13 2.3K 
[TXT]test_SCOP_Raf.py2020-05-24 14:13 4.1K 
[TXT]test_SCOP_Hie.py2020-05-24 14:13 1.3K 
[TXT]test_SCOP_Dom.py2020-05-24 14:13 1.7K 
[TXT]test_SCOP_Des.py2020-05-24 14:13 1.8K 
[TXT]test_SCOP_Cla.py2020-05-24 14:13 3.3K 
[TXT]test_SCOP_Astral.py2020-05-24 14:13 2.2K 
[TXT]test_Restriction.py2020-05-24 14:13 24K 
[TXT]test_RCSBFormats.py2020-05-24 14:13 2.5K 
[TXT]test_QCPSuperimposer.py2020-05-24 14:13 7.3K 
[TXT]test_ProtParam.py2020-05-24 14:13 11K 
[TXT]test_Probcons_tool.py2020-05-24 14:13 3.8K 
[TXT]test_Prank_tool.py2020-05-24 14:13 8.3K 
[TXT]test_PopGen_GenePop_nodepend.py2020-05-24 14:13 7.5K 
[TXT]test_PopGen_GenePop_EasyController.py2020-05-24 14:13 4.2K 
[TXT]test_PopGen_GenePop.py2020-05-24 14:13 3.5K 
[TXT]test_Phylo_networkx.py2020-05-24 14:13 1.2K 
[TXT]test_Phylo_matplotlib.py2020-05-24 14:13 3.6K 
[TXT]test_Phylo_NeXML.py2020-05-24 14:13 2.7K 
[TXT]test_Phylo_CDAO.py2020-05-24 14:13 3.3K 
[TXT]test_PhyloXML.py2020-05-24 14:13 29K 
[TXT]test_Phylo.py2020-05-24 14:13 21K 
[TXT]test_Phd.py2020-05-24 14:13 19K 
[TXT]test_Pathway.py2020-05-24 14:13 8.4K 
[TXT]test_PQR.py2020-05-24 14:13 7.0K 
[TXT]test_PDB_vectors.py2020-05-24 14:13 9.2K 
[TXT]test_PDB_parse_pdb_header.py2020-05-24 14:13 4.3K 
[TXT]test_PDB_internal_coords.py2020-05-24 14:13 8.8K 
[TXT]test_PDB_Superimposer.py2020-05-24 14:13 6.3K 
[TXT]test_PDB_StructureAlignment.py2020-05-24 14:13 1.7K 
[TXT]test_PDB_ResidueDepth.py2020-05-24 14:13 3.2K 
[TXT]test_PDB_Polypetide.py2020-05-24 14:13 4.1K 
[TXT]test_PDB_MMCIFParser.py2020-05-24 14:13 15K 
[TXT]test_PDB_MMCIF2Dict.py2020-05-24 14:13 16K 
[TXT]test_PDB_KDTree.py2020-05-24 14:13 7.6K 
[TXT]test_PDB_FragmentMapper.py2020-05-24 14:13 1.3K 
[TXT]test_PDB_Dice.py2020-05-24 14:13 2.1K 
[TXT]test_PDBList.py2020-05-24 14:13 5.4K 
[TXT]test_PDB.py2020-05-24 14:13 73K 
[TXT]test_PAML_yn00.py2020-05-24 14:13 7.0K 
[TXT]test_PAML_tools.py2020-05-24 14:13 4.7K 
[TXT]test_PAML_codeml.py2020-05-24 14:13 26K 
[TXT]test_PAML_baseml.py2020-05-24 14:13 12K 
[TXT]test_Nexus.py2020-05-24 14:13 38K 
[TXT]test_NaiveBayes.py2020-05-24 14:13 4.1K 
[TXT]test_NMR.py2020-05-24 14:13 5.5K 
[TXT]test_NCBI_qblast.py2020-05-24 14:13 16K 
[TXT]test_NCBI_BLAST_tools.py2020-05-24 14:13 21K 
[TXT]test_NCBIXML.py2020-05-24 14:13 166K 
[TXT]test_NCBITextParser.py2020-05-24 14:13 1.3M 
[TXT]test_NACCESS_tool.py2020-05-24 14:13 1.2K 
[TXT]test_Muscle_tool.py2020-05-24 14:13 18K 
[TXT]test_Medline.py2020-05-24 14:13 17K 
[TXT]test_MarkovModel.py2020-05-24 14:13 22K 
[TXT]test_Mafft_tool.py2020-05-24 14:13 7.5K 
[TXT]test_MafIO_index.py2020-05-24 14:13 31K 
[TXT]test_MSAProbs_tool.py2020-05-24 14:13 5.7K 
[TXT]test_LogisticRegression.py2020-05-24 14:13 4.1K 
[TXT]test_KeyWList.py2020-05-24 14:13 5.8K 
[TXT]test_KGML_nographics.py2020-05-24 14:13 4.8K 
[TXT]test_KGML_graphics_online.py2020-05-24 14:13 2.7K 
[TXT]test_KGML_graphics.py2020-05-24 14:13 7.8K 
[TXT]test_KEGG_online.py2020-05-24 14:13 9.6K 
[TXT]test_KEGG.py2020-05-24 14:13 7.2K 
[TXT]test_HMMGeneral.py2020-05-24 14:13 17K 
[TXT]test_HMMCasino.py2020-05-24 14:13 6.2K 
[TXT]test_GraphicsGeneral.py2020-05-24 14:13 2.6K 
[TXT]test_GraphicsDistribution.py2020-05-24 14:13 2.6K 
[TXT]test_GraphicsChromosome.py2020-05-24 14:13 38K 
[TXT]test_GraphicsBitmaps.py2020-05-24 14:13 4.1K 
[TXT]test_GenomeDiagram.py2020-05-24 14:13 46K 
[TXT]test_GenBank.py2020-05-24 14:13 341K 
[TXT]test_File.py2020-05-24 14:13 3.8K 
[TXT]test_Fasttree_tool.py2020-05-24 14:13 5.9K 
[TXT]test_FSSP.py2020-05-24 14:13 2.9K 
[TXT]test_ExPASy.py2020-05-24 14:13 1.7K 
[TXT]test_Enzyme.py2020-05-24 14:13 6.2K 
[TXT]test_Entrez_parser.py2020-05-24 14:13 566K 
[TXT]test_Entrez_online.py2020-05-24 14:13 12K 
[TXT]test_Entrez.py2020-05-24 14:13 8.0K 
[TXT]test_EmbossPrimer.py2020-05-24 14:13 9.1K 
[TXT]test_EmbossPhylipNew.py2020-05-24 14:13 12K 
[TXT]test_Emboss.py2020-05-24 14:13 39K 
[TXT]test_EMBL_unittest.py2020-05-24 14:13 3.0K 
[TXT]test_Dialign_tool.py2020-05-24 14:13 4.6K 
[TXT]test_DSSP_tool.py2020-05-24 14:13 2.7K 
[TXT]test_Crystal.py2020-05-24 14:13 16K 
[TXT]test_Consensus.py2020-05-24 14:13 6.8K 
[TXT]test_Compass.py2020-05-24 14:13 3.9K 
[TXT]test_ColorSpiral.py2020-05-24 14:13 4.1K 
[TXT]test_CodonTable.py2020-05-24 14:13 35K 
[TXT]test_Cluster.py2020-05-24 14:13 102K 
[TXT]test_Clustalw_tool.py2020-05-24 14:13 12K 
[TXT]test_ClustalOmega_tool.py2020-05-24 14:13 8.5K 
[TXT]test_Chi2.py2020-05-24 14:13 1.2K 
[TXT]test_CAPS.py2020-05-24 14:13 3.8K 
[TXT]test_Blast_Record.py2020-05-24 14:13 1.1K 
[TXT]test_BioSQL_sqlite3_online.py2020-05-24 14:13 1.1K 
[TXT]test_BioSQL_sqlite3.py2020-05-24 14:13 2.6K 
[TXT]test_BioSQL_psycopg2_online.py2020-05-24 14:13 1.0K 
[TXT]test_BioSQL_psycopg2.py2020-05-24 14:13 801  
[TXT]test_BioSQL_mysql_connector_online.py2020-05-24 14:13 1.0K 
[TXT]test_BioSQL_mysql_connector.py2020-05-24 14:13 824  
[TXT]test_BioSQL_MySQLdb_online.py2020-05-24 14:13 1.0K 
[TXT]test_BioSQL_MySQLdb.py2020-05-24 14:13 806  
[TXT]test_BWA_tool.py2020-05-24 14:13 7.7K 
[TXT]test_Application.py2020-05-24 14:13 4.2K 
[TXT]test_AlignInfo.py2020-05-24 14:13 7.0K 
[TXT]test_AlignIO_convert.py2020-05-24 14:13 2.7K 
[TXT]test_AlignIO_PhylipIO.py2020-05-24 14:13 8.6K 
[TXT]test_AlignIO_MauveIO.py2020-05-24 14:13 5.1K 
[TXT]test_AlignIO_FastaIO.py2020-05-24 14:13 43K 
[TXT]test_AlignIO_EmbossIO.py2020-05-24 14:13 15K 
[TXT]test_AlignIO_ClustalIO.py2020-05-24 14:13 12K 
[TXT]test_AlignIO.py2020-05-24 14:13 62K 
[TXT]test_Affy.py2020-05-24 14:13 14K 
[TXT]test_Ace.py2020-05-24 14:13 116K 
[TXT]seq_tests_common.py2020-05-24 14:13 13K 
[TXT]search_tests_common.py2020-05-24 14:13 7.0K 
[TXT]run_tests.py2020-05-24 14:13 13K 
[TXT]requires_wise.py2020-05-24 14:13 945  
[TXT]requires_internet.py2020-05-24 14:13 1.2K 
[DIR]phenotype/2020-05-25 06:38 -  
[TXT]pairwise2_testCases.py2020-05-24 14:13 26K 
[DIR]msf/2020-05-25 06:38 -  
[DIR]motifs/2020-05-25 06:38 -  
[TXT]common_BioSQL_online.py2020-05-24 14:13 4.5K 
[TXT]common_BioSQL.py2020-05-24 14:13 46K 
[DIR]codonalign/2020-05-25 06:38 -  
[   ]biosql.ini.sample2020-05-24 14:13 706  
[   ]biosql.ini.appveyor2020-05-24 14:13 795  
[DIR]Xdna/2020-05-25 06:38 -  
[DIR]Wise/2020-05-25 06:38 -  
[DIR]UniProt/2020-05-25 06:38 -  
[DIR]UniGene/2020-05-25 06:38 -  
[DIR]TreeConstruction/2020-05-25 06:38 -  
[DIR]SwissProt/2020-05-25 06:38 -  
[DIR]SubsMat/2020-05-25 06:38 -  
[DIR]Stockholm/2020-05-25 06:38 -  
[DIR]SnapGene/2020-05-25 06:38 -  
[DIR]SeqXML/2020-05-25 06:38 -  
[DIR]SamBam/2020-05-25 06:38 -  
[DIR]Saf/2020-05-25 06:38 -  
[DIR]SCOP/2020-05-25 06:38 -  
[DIR]Roche/2020-05-25 06:38 -  
[DIR]Registry/2020-05-25 06:38 -  
[DIR]Rebase/2020-05-25 06:38 -  
[DIR]Quality/2020-05-25 06:38 -  
[DIR]Prosite/2020-05-25 06:38 -  
[DIR]PopGen/2020-05-25 06:38 -  
[DIR]PhyloXML/2020-05-25 06:38 -  
[DIR]Phylip/2020-05-25 06:38 -  
[DIR]Phd/2020-05-25 06:38 -  
[DIR]PQR/2020-05-25 06:38 -  
[DIR]PDB/2020-05-25 06:38 -  
[DIR]PAML/2020-05-25 06:38 -  
[DIR]Nib/2020-05-25 06:38 -  
[DIR]Nexus/2020-05-25 06:38 -  
[DIR]NeuralNetwork/2020-05-25 06:38 -  
[DIR]NeXML/2020-05-25 06:38 -  
[DIR]NMR/2020-05-25 06:38 -  
[DIR]NBRF/2020-05-25 06:38 -  
[DIR]MetaTool/2020-05-25 06:38 -  
[DIR]Medline/2020-05-25 06:38 -  
[DIR]Mauve/2020-05-25 06:38 -  
[DIR]MAF/2020-05-25 06:38 -  
[DIR]KEGG/2020-05-25 06:38 -  
[DIR]InterProScan/2020-05-25 06:38 -  
[DIR]IntelliGenetics/2020-05-25 06:38 -  
[DIR]Hmmer/2020-05-25 06:38 -  
[DIR]HHsuite/2020-05-25 06:38 -  
[DIR]Graphics/2020-05-25 06:38 -  
[DIR]Geo/2020-05-25 06:38 -  
[DIR]GenBank/2020-05-25 06:38 -  
[DIR]Gck/2020-05-25 06:38 -  
[DIR]GFF/2020-05-25 06:38 -  
[DIR]Fasta/2020-05-25 06:38 -  
[DIR]FSSP/2020-05-25 06:38 -  
[DIR]ExtendedPhylip/2020-05-25 06:38 -  
[DIR]Exonerate/2020-05-25 06:38 -  
[DIR]Enzymes/2020-05-25 06:38 -  
[DIR]Entrez/2020-05-25 06:38 -  
[DIR]Emboss/2020-05-25 06:38 -  
[DIR]EMBL/2020-05-25 06:38 -  
[DIR]Compass/2020-05-25 06:38 -  
[DIR]CodonUsage/2020-05-25 06:38 -  
[DIR]Cluster/2020-05-25 06:38 -  
[DIR]Clustalw/2020-05-25 06:38 -  
[DIR]Cellosaurus/2020-05-25 06:38 -  
[DIR]CDAO/2020-05-25 06:38 -  
[DIR]Blat/2020-05-25 06:38 -  
[DIR]Blast/2020-05-25 06:38 -  
[DIR]BioSQL/2020-05-25 06:38 -  
[DIR]BWA/2020-05-25 06:38 -  
[DIR]Align/2020-05-25 06:38 -  
[DIR]Affy/2020-05-25 06:38 -  
[DIR]Ace/2020-05-25 06:38 -  
[DIR]Abi/2020-05-25 06:38 -  

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