Index of /kundaje/marinovg/oak/various/Paramecium/2015-06-12-Ugne-data

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[DIR]DESeq/2017-09-21 13:47 -  
[ ]GSF869-Doak-Ugne-209_S7-Paramecium_tetraurelia.transcriptome.InsLen2015-06-15 04:30 7.6K 
[ ]GSF869-Doak-Ugne-209_S7-multimicronucleatum_MO3c4_annotation_v1.transcriptome.InsLen2015-06-15 03:49 2.9K 
[ ]GSF869-Doak-Ugne-209_S7-primaurelia_Ir4-2_annotation_v1.transcriptome.InsLen2015-06-15 04:13 6.9K 
[ ]GSF869-Doak-Ugne-209_S7-sexaurelia_AZ8-4_annotation_v1.transcriptome.InsLen2015-06-15 04:13 5.4K 
[ ]GSF869-Doak-Ugne-209_S7_R1_001.100mers.lines2015-06-14 15:45 9  
[ ]GSF869-Doak-Ugne-223_S10-Paramecium_tetraurelia.transcriptome.InsLen2015-06-15 04:34 7.6K 
[ ]GSF869-Doak-Ugne-223_S10-biaurelia_V1-4_annotation_v1.transcriptome.InsLen2015-06-15 04:25 6.0K 
[ ]GSF869-Doak-Ugne-223_S10-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 03:53 3.5K 
[ ]GSF869-Doak-Ugne-223_S10-multimicronucleatum_MO3c4_annotation_v1.transcriptome.InsLen2015-06-15 03:49 3.3K 
[ ]GSF869-Doak-Ugne-223_S10-primaurelia_Ir4-2_annotation_v1.transcriptome.InsLen2015-06-15 04:19 7.4K 
[ ]GSF869-Doak-Ugne-223_S10-sexaurelia_AZ8-4_annotation_v1.transcriptome.InsLen2015-06-15 04:14 5.8K 
[ ]GSF869-Doak-Ugne-223_S10.mapped_readIDs.files2015-06-14 15:52 254  
[ ]GSF869-Doak-Ugne-223_S10.mapped_readIDs.table2015-06-14 16:07 281  
[ ]GSF869-Doak-Ugne-223_S10_R1_001.100mers.lines2015-06-14 15:45 10  
[ ]GSF869-Doak-Ugne-227_S13-Paramecium_tetraurelia.transcriptome.InsLen2015-06-15 04:25 7.1K 
[ ]GSF869-Doak-Ugne-227_S13-biaurelia_V1-4_annotation_v1.transcriptome.InsLen2015-06-15 04:22 5.5K 
[ ]GSF869-Doak-Ugne-227_S13-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 03:53 3.4K 
[ ]GSF869-Doak-Ugne-227_S13-multimicronucleatum_MO3c4_annotation_v1.transcriptome.InsLen2015-06-15 03:49 3.6K 
[ ]GSF869-Doak-Ugne-227_S13-primaurelia_Ir4-2_annotation_v1.transcriptome.InsLen2015-06-15 04:17 7.5K 
[ ]GSF869-Doak-Ugne-227_S13-sexaurelia_AZ8-4_annotation_v1.transcriptome.InsLen2015-06-15 04:23 7.7K 
[ ]GSF869-Doak-Ugne-227_S13.mapped_readIDs.files2015-06-14 15:52 256  
[ ]GSF869-Doak-Ugne-227_S13.mapped_readIDs.table2015-06-14 16:11 274  
[ ]GSF869-Doak-Ugne-227_S13_R1_001.100mers.lines2015-06-14 15:45 10  
[ ]GSF869-Doak-Ugne-328_S12-Paramecium_tetraurelia.transcriptome.InsLen2015-06-15 04:37 7.8K 
[ ]GSF869-Doak-Ugne-328_S12-biaurelia_V1-4_annotation_v1.transcriptome.InsLen2015-06-15 04:23 5.7K 
[ ]GSF869-Doak-Ugne-328_S12-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 03:53 3.6K 
[ ]GSF869-Doak-Ugne-328_S12-multimicronucleatum_MO3c4_annotation_v1.transcriptome.InsLen2015-06-15 03:49 3.3K 
[ ]GSF869-Doak-Ugne-328_S12-primaurelia_Ir4-2_annotation_v1.transcriptome.InsLen2015-06-15 04:14 7.2K 
[ ]GSF869-Doak-Ugne-328_S12-sexaurelia_AZ8-4_annotation_v1.transcriptome.InsLen2015-06-15 04:13 5.8K 
[ ]GSF869-Doak-Ugne-328_S12_R1_001.100mers.lines2015-06-14 15:45 10  
[ ]GSF869-Doak-Ugne-Hol-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 04:11 7.5K 
[ ]GSF869-Doak-Ugne-Hol_S14_R1_001.100mers.lines2015-06-14 15:46 10  
[ ]GSF869-Doak-Ugne-NiA_S11-Paramecium_tetraurelia.transcriptome.InsLen2015-06-15 04:27 7.4K 
[ ]GSF869-Doak-Ugne-NiA_S11-biaurelia_V1-4_annotation_v1.transcriptome.InsLen2015-06-15 04:25 6.0K 
[ ]GSF869-Doak-Ugne-NiA_S11-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 03:53 3.7K 
[ ]GSF869-Doak-Ugne-NiA_S11-multimicronucleatum_MO3c4_annotation_v1.transcriptome.InsLen2015-06-15 03:49 3.9K 
[ ]GSF869-Doak-Ugne-NiA_S11-primaurelia_Ir4-2_annotation_v1.transcriptome.InsLen2015-06-15 04:18 7.3K 
[ ]GSF869-Doak-Ugne-NiA_S11-sexaurelia_AZ8-4_annotation_v1.transcriptome.InsLen2015-06-15 04:14 6.3K 
[ ]GSF869-Doak-Ugne-NiA_S11.mapped_readIDs.files2015-06-14 15:52 254  
[ ]GSF869-Doak-Ugne-NiA_S11.mapped_readIDs.table2015-06-14 16:02 273  
[ ]GSF869-Doak-Ugne-NiA_S11_R1_001.100mers.lines2015-06-14 15:46 10  
[ ]GSF869-Doak-Ugne-Psonn_S8_R1_001.100mers.lines2015-06-14 15:45 10  
[ ]GSF869-Doak-Ugne-Ugne-209_S7-biaurelia_V1-4_annotation_v1.transcriptome.InsLen2015-06-15 04:22 5.2K 
[ ]GSF869-Doak-Ugne-Ugne-209_S7-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 03:53 3.3K 
[ ]GSF869-Doak-Ugne-V1-4_S9-Paramecium_tetraurelia.transcriptome.InsLen2015-06-15 04:27 7.1K 
[ ]GSF869-Doak-Ugne-V1-4_S9-biaurelia_V1-4_annotation_v1.transcriptome.InsLen2015-06-15 04:36 7.5K 
[ ]GSF869-Doak-Ugne-V1-4_S9-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 03:53 3.1K 
[ ]GSF869-Doak-Ugne-V1-4_S9-multimicronucleatum_MO3c4_annotation_v1.transcriptome.InsLen2015-06-15 03:49 3.3K 
[ ]GSF869-Doak-Ugne-V1-4_S9-primaurelia_Ir4-2_annotation_v1.transcriptome.InsLen2015-06-15 04:16 7.1K 
[ ]GSF869-Doak-Ugne-V1-4_S9-sexaurelia_AZ8-4_annotation_v1.transcriptome.InsLen2015-06-15 04:13 5.3K 
[ ]GSF869-Doak-Ugne-V1-4_S9.mapped_readIDs.files2015-06-14 15:52 252  
[ ]GSF869-Doak-Ugne-V1-4_S9.mapped_readIDs.table2015-06-14 16:16 272  
[ ]GSF869-Doak-Ugne-V1-4_S9_R1_001.100mers.lines2015-06-14 15:45 10  
[ ]GSF869-Doak-Ugne-no-Hol-caudatum_43c3d_annotation_v1.transcriptome.InsLen2015-06-15 04:03 6.5K 
[ ]GSF869-Doak-Ugne-no-Hol_S15_R1_001.100mers.lines2015-06-14 15:45 10  
[ ]InsLen.files2015-06-15 06:56 5.1K 
[ ]InsLen.table2015-06-15 06:56 128K 
[TXT]PEInsertDistFromBAM.sh2015-06-15 03:38 15K 
[DIR]Paramecium-biaurelia-GSF869-Doak-Ugne-223_S10-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:47 -  
[DIR]Paramecium-biaurelia-GSF869-Doak-Ugne-NiA_S11-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:47 -  
[DIR]Paramecium-biaurelia-GSF869-Doak-Ugne-V1-4_S9-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:47 -  
[DIR]Paramecium-caudatum-Hol_S14-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:47 -  
[DIR]Paramecium-caudatum-no-Hol_S15-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:47 -  
[DIR]Paramecium-sexaurelia-GSF869-Doak-Ugne-227_S13-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium-sexaurelia-GSF869-Doak-Ugne-V1-4_S9-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_primaurelia-GSF869-Doak-Ugne-223_S10-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_primaurelia-GSF869-Doak-Ugne-227_S13-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_primaurelia-GSF869-Doak-Ugne-NiA_S11-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_primaurelia-GSF869-Doak-Ugne-V1-4_S9-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_tetraurelia-GSF869-Doak-Ugne-209_S7-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_tetraurelia-GSF869-Doak-Ugne-223_S10-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_tetraurelia-GSF869-Doak-Ugne-227_S13-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_tetraurelia-GSF869-Doak-Ugne-328_S12-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_tetraurelia-GSF869-Doak-Ugne-NiA_S11-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[DIR]Paramecium_tredecaurelia-GSF869-Doak-Ugne-209_S7-2x100-TopHat-2.0.8-minIntron10/2017-09-21 13:48 -  
[TXT]SAM_reads_in_genes3_BAM.sh2015-06-15 03:58 7.3K 
[ ]SAMstats-Paramecium-biaurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-14 14:09 172  
[ ]SAMstats-Paramecium-biaurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-14 14:08 171  
[ ]SAMstats-Paramecium-biaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-14 16:52 175  
[ ]SAMstats-Paramecium-caudatum-Hol_S14-2x1002015-06-13 16:14 175  
[ ]SAMstats-Paramecium-caudatum-no-Hol_S15-2x1002015-06-13 15:37 174  
[ ]SAMstats-Paramecium-sexaurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-14 16:31 173  
[ ]SAMstats-Paramecium-sexaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-14 14:06 170  
[ ]SAMstats-Paramecium_primaurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-14 14:16 173  
[ ]SAMstats-Paramecium_primaurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-14 14:17 173  
[ ]SAMstats-Paramecium_primaurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-14 14:10 173  
[ ]SAMstats-Paramecium_primaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-14 14:09 173  
[ ]SAMstats-Paramecium_tetraurelia-GSF869-Doak-Ugne-209_S7-2x1002015-06-14 14:12 173  
[ ]SAMstats-Paramecium_tetraurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-14 14:15 173  
[ ]SAMstats-Paramecium_tetraurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-14 14:05 169  
[ ]SAMstats-Paramecium_tetraurelia-GSF869-Doak-Ugne-328_S12-2x1002015-06-14 14:20 174  
[ ]SAMstats-Paramecium_tetraurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-14 14:06 170  
[ ]SAMstats-Paramecium_tredecaurelia-GSF869-Doak-Ugne-209_S7-2x1002015-06-15 22:38 172  
[ ]SAMstats.files2015-06-15 03:09 1.6K 
[TXT]SAMstats.sh2015-06-13 13:51 1.6K 
[ ]SAMstats.table2015-06-15 03:10 1.6K 
[ ]coverage-2x100-Hol.files2015-06-15 03:16 116  
[ ]coverage-2x100-Hol.table2015-06-15 03:17 3.0K 
[ ]coverage-2x100.files2015-06-15 08:32 1.6K 
[ ]coverage-2x100.table2015-06-15 08:34 20K 
[ ]coverage-Paramecium-biaurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-15 08:28 1.7K 
[ ]coverage-Paramecium-biaurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-15 08:28 1.7K 
[ ]coverage-Paramecium-biaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-15 08:29 1.6K 
[ ]coverage-Paramecium-caudatum-Hol_S14-2x1002015-06-15 03:15 1.6K 
[ ]coverage-Paramecium-caudatum-no-Hol_S15-2x1002015-06-15 03:15 1.6K 
[ ]coverage-Paramecium-sexaurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-15 08:28 1.6K 
[ ]coverage-Paramecium-sexaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-15 08:27 1.7K 
[ ]coverage-Paramecium_primaurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-15 08:28 1.6K 
[ ]coverage-Paramecium_primaurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-15 08:28 1.6K 
[ ]coverage-Paramecium_primaurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-15 08:27 1.6K 
[ ]coverage-Paramecium_primaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-15 08:28 1.7K 
[ ]coverage-Paramecium_tetraurelia-GSF869-Doak-Ugne-209_S7-2x1002015-06-15 08:28 1.6K 
[ ]coverage-Paramecium_tetraurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-15 08:28 1.7K 
[ ]coverage-Paramecium_tetraurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-15 08:28 1.7K 
[ ]coverage-Paramecium_tetraurelia-GSF869-Doak-Ugne-328_S12-2x1002015-06-15 08:28 1.7K 
[ ]coverage-Paramecium_tetraurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-15 08:28 1.7K 
[TXT]coverage.sh2015-06-13 13:54 786  
[TXT]cufflinks.sh2015-06-15 04:02 13K 
[TXT]eXpress-2x100-H.sh2015-06-13 03:30 782  
[DIR]express-1.5.1-rf-2x100mers-Paramecium-caudatum-Hol_S14/2017-09-21 13:47 -  
[DIR]express-1.5.1-rf-2x100mers-Paramecium-caudatum-no-Hol_S15/2017-09-21 13:47 -  
[ ]express-1.5.1-rf-2x100mers-Paramecium-caudatum.TPM.files2015-06-13 13:57 180  
[ ]express-1.5.1-rf-2x100mers-Paramecium-caudatum.TPM.table2015-06-13 13:57 536K 
[ ]express-1.5.1-rf-2x100mers-Paramecium-caudatum.eff_counts.files2015-06-13 13:57 180  
[ ]express-1.5.1-rf-2x100mers-Paramecium-caudatum.eff_counts.table2015-06-13 13:57 602K 
[TXT]makewig-H.sh2015-06-13 13:54 1.6K 
[TXT]makewig.sh2015-06-15 04:01 12K 
[TXT]map-H.sh2015-06-12 21:05 3.9K 
[TXT]map-P-others.sh2015-06-13 14:35 25K 
[TXT]map-P.sh2015-06-12 21:05 8.4K 
[ ]sam_reads_genes-Paramecium-biaurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-15 06:17 92  
[ ]sam_reads_genes-Paramecium-biaurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-15 06:16 92  
[ ]sam_reads_genes-Paramecium-biaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-15 06:29 92  
[ ]sam_reads_genes-Paramecium-caudatum-Hol_S14-2x1002015-06-13 15:19 94  
[ ]sam_reads_genes-Paramecium-caudatum-no-Hol_S15-2x1002015-06-13 15:05 93  
[ ]sam_reads_genes-Paramecium-sexaurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-15 06:39 93  
[ ]sam_reads_genes-Paramecium-sexaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-15 06:31 93  
[ ]sam_reads_genes-Paramecium_primaurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-15 06:23 93  
[ ]sam_reads_genes-Paramecium_primaurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-15 06:24 94  
[ ]sam_reads_genes-Paramecium_primaurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-15 06:27 92  
[ ]sam_reads_genes-Paramecium_primaurelia-GSF869-Doak-Ugne-V1-4_S9-2x1002015-06-15 06:27 92  
[ ]sam_reads_genes-Paramecium_tetraurelia-GSF869-Doak-Ugne-209_S7-2x1002015-06-15 06:34 93  
[ ]sam_reads_genes-Paramecium_tetraurelia-GSF869-Doak-Ugne-223_S10-2x1002015-06-15 06:36 94  
[ ]sam_reads_genes-Paramecium_tetraurelia-GSF869-Doak-Ugne-227_S13-2x1002015-06-15 06:36 94  
[ ]sam_reads_genes-Paramecium_tetraurelia-GSF869-Doak-Ugne-328_S12-2x1002015-06-15 06:44 94  
[ ]sam_reads_genes-Paramecium_tetraurelia-GSF869-Doak-Ugne-NiA_S11-2x1002015-06-15 06:39 94  
[TXT]tophat-2x100-H.sh2015-06-13 03:29 2.0K 
[TXT]tophat-2x100.sh2015-06-13 20:41 15K 
[ ]z2015-06-16 00:11 4.6K 
[TXT]zcat.sh2015-06-12 21:04 2.9K 
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