cd /N/dc2/projects/marinovg/2015-06-12-Ugne-data; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py --- Paramecium-caudatum-Hol_S14-2x100-TopHat-2.0.8-minIntron10/accepted_hits.bam /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_caudatum_43c3d/caudatum_43c3d_assembly_v1.chrom.sizes Paramecium-caudatum-Hol_S14-2x100-TopHat-2.0.8-minIntron10/accepted_hits.unique.wig -notitle -nomulti -RPM
cd /N/dc2/projects/marinovg/2015-06-12-Ugne-data; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py --- Paramecium-caudatum-no-Hol_S15-2x100-TopHat-2.0.8-minIntron10/accepted_hits.bam /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_caudatum_43c3d/caudatum_43c3d_assembly_v1.chrom.sizes Paramecium-caudatum-no-Hol_S15-2x100-TopHat-2.0.8-minIntron10/accepted_hits.unique.wig -notitle -nomulti -RPM
cd /N/dc2/projects/marinovg/2015-06-12-Ugne-data; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py --- Paramecium-caudatum-Hol_S14-2x100-TopHat-2.0.8-minIntron10/accepted_hits.bam /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_caudatum_43c3d/caudatum_43c3d_assembly_v1.chrom.sizes Paramecium-caudatum-Hol_S14-2x100-TopHat-2.0.8-minIntron10/accepted_hits.wig -notitle -RPM
cd /N/dc2/projects/marinovg/2015-06-12-Ugne-data; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py --- Paramecium-caudatum-no-Hol_S15-2x100-TopHat-2.0.8-minIntron10/accepted_hits.bam /N/dc2/projects/marinovg/genomes/Ciliates/Paramecium_caudatum_43c3d/caudatum_43c3d_assembly_v1.chrom.sizes Paramecium-caudatum-no-Hol_S15-2x100-TopHat-2.0.8-minIntron10/accepted_hits.wig -notitle -RPM