Index of /kundaje/marinovg/oak/various/ENCODE4/single-cell/2021-04-06-UG-SHARE-seq-run
Name
Last modified
Size
Description
Parent Directory
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ATACTSSscore.txt
2021-04-13 23:21
1.1K
ATAC_per_cell_stats.files
2021-04-13 23:26
1.2K
ATAC_per_cell_stats.table
2021-04-13 23:26
601
L068_120568-BC10.fastq.lines
2021-04-10 05:19
10
L069_120568-BC11.fastq.lines
2021-04-10 05:23
11
L072_120568-BC55.fastq.lines
2021-04-10 05:27
11
L073_120568-BC68.fastq.lines
2021-04-10 05:26
11
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38
2021-04-13 21:48
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38.BC_dedup
2021-04-13 20:37
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10
2021-04-13 21:58
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10.BC_dedup
2021-04-13 20:41
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.hg38
2021-04-13 21:36
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.mm10
2021-04-13 21:40
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38
2021-04-13 21:31
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38.BC_dedup
2021-04-13 20:33
164
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10
2021-04-13 21:42
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10.BC_dedup
2021-04-13 20:36
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38.chrM
2021-04-13 21:27
165
SAMstats-SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.mm10.chrM
2021-04-13 21:19
163
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38
2021-04-13 21:57
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38.BC_dedup
2021-04-13 20:41
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10
2021-04-13 22:08
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10.BC_dedup
2021-04-13 20:44
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.hg38
2021-04-13 21:44
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.mm10
2021-04-13 21:47
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38
2021-04-13 21:38
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38.BC_dedup
2021-04-13 20:36
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10
2021-04-13 21:45
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10.BC_dedup
2021-04-13 20:37
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38.chrM
2021-04-13 21:32
165
SAMstats-SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.mm10.chrM
2021-04-13 21:20
163
SAMstats.files
2021-04-13 23:07
3.4K
SAMstats.table
2021-04-13 23:08
2.7K
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.barcodes_annotated.trimmed.fastReadLengthDist
2021-04-12 18:48
5.0K
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.fastReadLengthDist
2021-04-12 18:52
5.0K
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
84
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
83
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
83
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L068-SHARE_ATAC_3_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
83
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.barcodes_annotated.trimmed.fastReadLengthDist
2021-04-12 18:51
5.2K
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.fastReadLengthDist
2021-04-12 18:56
5.2K
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
85
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.BWA.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
84
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.hg38.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
84
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_eCDF
2021-04-13 23:24
4.9K
SK-L069-SHARE_ATAC_4_MEF_HEK_2k.trimmed.hg38+mm10.unique.nochrM.mm10.BC_dedup.per_cell_stats.fragments_hist
2021-04-13 23:25
84
SK-L072-SHARE_RNA_2_MEF_HEK_2K_2uLTn5.barcodes_annotated.trimmed.fastReadLengthDist
2021-04-12 18:55
5.6K
SK-L072-SHARE_RNA_2_MEF_HEK_2K_2uLTn5.fastReadLengthDist
2021-04-12 19:05
5.7K
SK-L073-SHARE_RNA_2_MEF_HEK_2K_1uLTn5.barcodes_annotated.trimmed.fastReadLengthDist
2021-04-12 18:54
5.4K
SK-L073-SHARE_RNA_2_MEF_HEK_2K_1uLTn5.fastReadLengthDist
2021-04-12 19:02
5.5K
barcodes-annotate.sh
2021-04-10 08:09
261K
gzip.sh
2021-04-10 08:07
27K
trimming-1-trim_galore.sh
2021-04-12 09:15
83K
trimming-2-revcomp.sh
2021-04-12 09:18
126K
trimming-3-trim_galore.sh
2021-04-12 09:18
77K
trimming-4-trim_galore.sh
2021-04-12 09:19
141K
z
2021-04-13 23:07
3.9K
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