Index of /kundaje/marinovg/oak/papers/2025_CtoT_E_coli-SMF/2025-02-14-ChIP-exo-datasets/03-E.coli-Fur-RpoB-GSE54899

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[DIR]Fur_with_DPD_1.1x36mers.unique.GPS/2025-02-22 03:55 -  
[TXT]Fur_with_DPD_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:12 4.3M 
[TXT]Fur_with_DPD_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:12 4.3M 
[DIR]Fur_with_DPD_1.SE.a.GPS/2025-03-21 17:28 -  
[TXT]Fur_with_DPD_1.SE.a.bigWig2025-02-17 04:13 14M 
[TXT]Fur_with_DPD_1.SE.a.minus.bigWig2025-02-17 04:13 9.3M 
[TXT]Fur_with_DPD_1.SE.a.plus.bigWig2025-02-17 04:13 9.3M 
[ ]Fur_with_DPD_1.fastq.lines2025-02-15 07:41 9  
[DIR]Fur_with_DPD_2.1x36mers.unique.GPS/2025-02-22 03:53 -  
[TXT]Fur_with_DPD_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:12 3.7M 
[TXT]Fur_with_DPD_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:12 3.7M 
[DIR]Fur_with_DPD_2.SE.a.GPS/2025-03-21 17:28 -  
[TXT]Fur_with_DPD_2.SE.a.bigWig2025-02-17 04:13 13M 
[TXT]Fur_with_DPD_2.SE.a.minus.bigWig2025-02-17 04:13 7.9M 
[TXT]Fur_with_DPD_2.SE.a.plus.bigWig2025-02-17 04:13 7.8M 
[ ]Fur_with_DPD_2.fastq.lines2025-02-15 07:41 9  
[DIR]Fur_with_Fe_1.1x36mers.unique.GPS/2025-02-22 03:50 -  
[TXT]Fur_with_Fe_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:12 3.6M 
[TXT]Fur_with_Fe_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:12 3.6M 
[DIR]Fur_with_Fe_1.SE.a.GPS/2025-03-21 17:28 -  
[TXT]Fur_with_Fe_1.SE.a.bigWig2025-02-17 04:13 12M 
[TXT]Fur_with_Fe_1.SE.a.minus.bigWig2025-02-17 04:13 7.8M 
[TXT]Fur_with_Fe_1.SE.a.plus.bigWig2025-02-17 04:13 7.8M 
[ ]Fur_with_Fe_1.fastq.lines2025-02-15 07:41 9  
[DIR]Fur_with_Fe_2.1x36mers.unique.GPS/2025-02-22 03:48 -  
[TXT]Fur_with_Fe_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:12 1.4M 
[TXT]Fur_with_Fe_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:12 1.4M 
[DIR]Fur_with_Fe_2.SE.a.GPS/2025-03-21 17:28 -  
[TXT]Fur_with_Fe_2.SE.a.bigWig2025-02-17 04:13 4.9M 
[TXT]Fur_with_Fe_2.SE.a.minus.bigWig2025-02-17 04:13 2.3M 
[TXT]Fur_with_Fe_2.SE.a.plus.bigWig2025-02-17 04:13 2.3M 
[ ]Fur_with_Fe_2.fastq.lines2025-02-15 07:41 8  
[DIR]RpoB_with_DPD_1.1x36mers.unique.GPS/2025-02-22 03:53 -  
[TXT]RpoB_with_DPD_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:12 4.1M 
[TXT]RpoB_with_DPD_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:12 4.1M 
[DIR]RpoB_with_DPD_1.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_DPD_1.SE.a.bigWig2025-02-17 04:13 12M 
[TXT]RpoB_with_DPD_1.SE.a.minus.bigWig2025-02-17 04:13 8.1M 
[TXT]RpoB_with_DPD_1.SE.a.plus.bigWig2025-02-17 04:13 8.1M 
[ ]RpoB_with_DPD_1.fastq.lines2025-02-15 07:42 9  
[DIR]RpoB_with_DPD_2.1x36mers.unique.GPS/2025-02-22 03:52 -  
[TXT]RpoB_with_DPD_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.1M 
[TXT]RpoB_with_DPD_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:12 4.1M 
[DIR]RpoB_with_DPD_2.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_DPD_2.SE.a.bigWig2025-02-17 04:13 12M 
[TXT]RpoB_with_DPD_2.SE.a.minus.bigWig2025-02-17 04:13 8.1M 
[TXT]RpoB_with_DPD_2.SE.a.plus.bigWig2025-02-17 04:13 8.1M 
[ ]RpoB_with_DPD_2.fastq.lines2025-02-15 07:42 9  
[DIR]RpoB_with_DPD_and_rifampicin_1.1x36mers.unique.GPS/2025-02-22 03:53 -  
[TXT]RpoB_with_DPD_and_rifampicin_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 3.4M 
[TXT]RpoB_with_DPD_and_rifampicin_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 3.4M 
[DIR]RpoB_with_DPD_and_rifampicin_1.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_DPD_and_rifampicin_1.SE.a.bigWig2025-02-17 04:13 10M 
[TXT]RpoB_with_DPD_and_rifampicin_1.SE.a.minus.bigWig2025-02-17 04:13 5.8M 
[TXT]RpoB_with_DPD_and_rifampicin_1.SE.a.plus.bigWig2025-02-17 04:13 5.8M 
[ ]RpoB_with_DPD_and_rifampicin_1.fastq.lines2025-02-15 07:42 9  
[DIR]RpoB_with_DPD_and_rifampicin_2.1x36mers.unique.GPS/2025-02-22 03:56 -  
[TXT]RpoB_with_DPD_and_rifampicin_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 3.6M 
[TXT]RpoB_with_DPD_and_rifampicin_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 3.6M 
[DIR]RpoB_with_DPD_and_rifampicin_2.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_DPD_and_rifampicin_2.SE.a.bigWig2025-02-17 04:13 11M 
[TXT]RpoB_with_DPD_and_rifampicin_2.SE.a.minus.bigWig2025-02-17 04:12 7.3M 
[TXT]RpoB_with_DPD_and_rifampicin_2.SE.a.plus.bigWig2025-02-17 04:12 7.3M 
[ ]RpoB_with_DPD_and_rifampicin_2.fastq.lines2025-02-15 07:42 9  
[DIR]RpoB_with_Fe_1.1x36mers.unique.GPS/2025-02-22 03:52 -  
[TXT]RpoB_with_Fe_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.1M 
[TXT]RpoB_with_Fe_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.1M 
[DIR]RpoB_with_Fe_1.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_Fe_1.SE.a.bigWig2025-02-17 04:13 12M 
[TXT]RpoB_with_Fe_1.SE.a.minus.bigWig2025-02-17 04:12 8.1M 
[TXT]RpoB_with_Fe_1.SE.a.plus.bigWig2025-02-17 04:12 8.2M 
[ ]RpoB_with_Fe_1.fastq.lines2025-02-15 07:41 9  
[DIR]RpoB_with_Fe_2.1x36mers.unique.GPS/2025-02-22 03:54 -  
[TXT]RpoB_with_Fe_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.0M 
[TXT]RpoB_with_Fe_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.0M 
[DIR]RpoB_with_Fe_2.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_Fe_2.SE.a.bigWig2025-02-17 04:13 12M 
[TXT]RpoB_with_Fe_2.SE.a.minus.bigWig2025-02-17 04:12 8.0M 
[TXT]RpoB_with_Fe_2.SE.a.plus.bigWig2025-02-17 04:12 8.0M 
[ ]RpoB_with_Fe_2.fastq.lines2025-02-15 07:42 9  
[DIR]RpoB_with_Fe_and_rifampicin_1.1x36mers.unique.GPS/2025-02-22 03:52 -  
[TXT]RpoB_with_Fe_and_rifampicin_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 3.8M 
[TXT]RpoB_with_Fe_and_rifampicin_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 3.8M 
[DIR]RpoB_with_Fe_and_rifampicin_1.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_Fe_and_rifampicin_1.SE.a.bigWig2025-02-17 04:13 11M 
[TXT]RpoB_with_Fe_and_rifampicin_1.SE.a.minus.bigWig2025-02-17 04:12 7.5M 
[TXT]RpoB_with_Fe_and_rifampicin_1.SE.a.plus.bigWig2025-02-17 04:12 7.5M 
[ ]RpoB_with_Fe_and_rifampicin_1.fastq.lines2025-02-15 07:42 9  
[DIR]RpoB_with_Fe_and_rifampicin_2.1x36mers.unique.GPS/2025-02-22 03:55 -  
[TXT]RpoB_with_Fe_and_rifampicin_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 3.7M 
[TXT]RpoB_with_Fe_and_rifampicin_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 3.7M 
[DIR]RpoB_with_Fe_and_rifampicin_2.SE.a.GPS/2025-03-21 17:28 -  
[TXT]RpoB_with_Fe_and_rifampicin_2.SE.a.bigWig2025-02-17 04:13 11M 
[TXT]RpoB_with_Fe_and_rifampicin_2.SE.a.minus.bigWig2025-02-17 04:12 7.4M 
[TXT]RpoB_with_Fe_and_rifampicin_2.SE.a.plus.bigWig2025-02-17 04:12 7.4M 
[ ]RpoB_with_Fe_and_rifampicin_2.fastq.lines2025-02-15 07:42 9  
[ ]SAMstats-1x36mers.files2025-02-15 06:46 712  
[TXT]SAMstats-1x36mers.sh2025-02-15 06:46 4.3K 
[ ]SAMstats-1x36mers.table2025-02-17 04:03 837  
[ ]SAMstats-2x36mers.files2025-02-15 06:46 712  
[ ]SAMstats-files.tar.gz2025-02-18 21:33 738  
[ ]config2025-02-15 06:46 4.3K 
[TXT]countlines.sh2025-02-15 06:46 1.0K 
[TXT]make5pwiggle-1x36mers.sh2025-02-15 06:46 8.0K 
[TXT]makewiggle-1x36mers.sh2025-02-15 06:46 3.7K 
[TXT]makewiggle-stranded-1x36mers.sh2025-02-15 06:46 7.8K 
[TXT]map-1x36mers.sh2025-02-16 02:57 18K 
[TXT]run_spp.sh2025-02-15 06:46 1.8K 
[TXT]samtools-index-1x36mers.sh2025-02-15 06:46 2.7K 
[TXT]wget.sh2025-02-15 06:45 1.3K 
[TXT]wigtobigwig-wig-1x36mers.sh2025-02-15 06:46 3.5K 
[TXT]wigtobigwig-wigplusminus-1x36mers.sh2025-02-15 06:46 7.2K 
[TXT]wigtobigwig-wigplusminus5p-1x36mers.sh2025-02-15 06:46 7.6K 
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