Homer Known Motif Enrichment Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/ZF7/out/peak/idr/pseudo_reps/rep1/ZF7_rep1-pr.IDR0.05.HomerResults)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 27245, Total Background Sequences = 471899
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1SeqBias: GA-repeat1e-411-9.476e+020.000026101.095.80%415979.288.15%motif file (matrix) pdf
2GAGA-repeat/SacCer-Promoters/Homer1e-371-8.554e+020.000020960.076.93%307240.165.11%motif file (matrix) pdf
3AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-366-8.437e+020.000019939.073.19%288163.461.07%motif file (matrix) pdf
4SeqBias: CA-repeat1e-363-8.376e+020.000023960.087.95%368796.078.16%motif file (matrix) pdf
5Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-326-7.512e+020.000018894.069.35%272139.157.67%motif file (matrix) pdf
6Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-323-7.440e+020.000018744.068.80%269660.457.15%motif file (matrix) pdf
7SUT1?/SacCer-Promoters/Homer1e-322-7.418e+020.000025864.094.93%415241.988.00%motif file (matrix) pdf
8KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-310-7.155e+020.000016803.061.68%235857.749.98%motif file (matrix) pdf
9Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer1e-300-6.925e+020.000015181.055.72%208509.044.19%motif file (matrix) pdf
10Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-293-6.750e+020.000016439.060.34%231055.148.97%motif file (matrix) pdf
11Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-284-6.544e+020.000014233.052.24%193847.841.08%motif file (matrix) pdf
12CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-277-6.380e+020.000012146.044.58%159743.133.85%motif file (matrix) pdf
13KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-276-6.365e+020.000013527.049.65%182672.538.71%motif file (matrix) pdf
14ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-271-6.246e+020.000013953.051.21%190313.740.33%motif file (matrix) pdf
15Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-259-5.966e+020.000016302.059.84%231902.549.14%motif file (matrix) pdf
16SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-258-5.964e+020.000021723.079.73%331781.570.31%motif file (matrix) pdf
17ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-257-5.919e+020.000011694.042.92%154157.432.67%motif file (matrix) pdf
18Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer1e-247-5.700e+020.000012752.046.81%172451.636.55%motif file (matrix) pdf
19Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-246-5.666e+020.000017405.063.89%252732.953.56%motif file (matrix) pdf
20Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-240-5.527e+020.000016337.059.97%234434.449.68%motif file (matrix) pdf
21Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-237-5.468e+020.000010793.039.62%141350.029.95%motif file (matrix) pdf
22ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-234-5.409e+020.000011964.043.91%160644.434.04%motif file (matrix) pdf
23Initiator/Drosophila-Promoters/Homer1e-231-5.335e+020.000012610.046.29%171632.136.37%motif file (matrix) pdf
24Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-230-5.300e+020.000013464.049.42%186058.939.43%motif file (matrix) pdf
25EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-227-5.247e+020.00009923.036.42%128299.627.19%motif file (matrix) pdf
26Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer1e-227-5.244e+020.000018434.067.66%273158.957.89%motif file (matrix) pdf
27IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer1e-224-5.163e+020.000013381.049.12%185270.839.26%motif file (matrix) pdf
28Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-217-5.004e+020.000011098.040.74%148198.331.41%motif file (matrix) pdf
29Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-213-4.921e+020.000010650.039.09%141284.929.94%motif file (matrix) pdf
30ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-212-4.882e+020.00009647.035.41%125371.726.57%motif file (matrix) pdf
31NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-208-4.809e+020.000010513.038.59%139547.729.57%motif file (matrix) pdf
32Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-208-4.806e+020.000015905.058.38%230186.348.78%motif file (matrix) pdf
33PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-208-4.795e+020.00009592.035.21%124849.526.46%motif file (matrix) pdf
34Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-207-4.783e+020.000011376.041.76%153687.032.57%motif file (matrix) pdf
35PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer1e-203-4.693e+020.000015286.056.11%219962.546.61%motif file (matrix) pdf
36Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-202-4.665e+020.000010561.038.76%140942.029.87%motif file (matrix) pdf
37Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-201-4.636e+020.000010810.039.68%145105.030.75%motif file (matrix) pdf
38ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-199-4.595e+020.00009323.034.22%121401.225.73%motif file (matrix) pdf
39Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-197-4.555e+020.000013315.048.87%186943.139.62%motif file (matrix) pdf
40GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-195-4.510e+020.00008769.032.19%113005.023.95%motif file (matrix) pdf
41GAGA-repeat/Arabidopsis-Promoters/Homer1e-192-4.427e+020.00008757.032.14%113153.323.98%motif file (matrix) pdf
42HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-189-4.364e+020.00008952.032.86%116489.724.69%motif file (matrix) pdf
43SeqBias: A/T bias1e-186-4.288e+020.000024428.089.66%393102.583.31%motif file (matrix) pdf
44PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-183-4.216e+020.000012346.045.32%172326.436.52%motif file (matrix) pdf
45Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-182-4.204e+020.000012976.047.63%182930.438.77%motif file (matrix) pdf
46HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer1e-181-4.189e+020.000012781.046.91%179732.938.09%motif file (matrix) pdf
47KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer1e-181-4.173e+020.00006907.025.35%85497.518.12%motif file (matrix) pdf
48Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)1e-180-4.166e+020.00007963.029.23%101793.221.57%motif file (matrix) pdf
49Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-180-4.150e+020.00009852.036.16%131775.327.93%motif file (matrix) pdf
50RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-180-4.150e+020.00007586.027.84%96009.920.35%motif file (matrix) pdf
51ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer1e-177-4.077e+020.00008530.031.31%111044.023.53%motif file (matrix) pdf
52Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer1e-176-4.053e+020.000012356.045.35%173287.636.72%motif file (matrix) pdf
53MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-175-4.036e+020.000011528.042.31%159627.933.83%motif file (matrix) pdf
54Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-171-3.947e+020.000013760.050.51%197487.841.85%motif file (matrix) pdf
55Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-170-3.927e+020.000010809.039.67%148337.431.44%motif file (matrix) pdf
56E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-166-3.831e+020.000010258.037.65%139818.029.63%motif file (matrix) pdf
57GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-165-3.821e+020.00007183.026.37%91111.219.31%motif file (matrix) pdf
58BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-165-3.803e+020.00009844.036.13%133243.728.24%motif file (matrix) pdf
59AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-161-3.729e+020.00009490.034.83%127885.427.10%motif file (matrix) pdf
60AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-161-3.726e+020.00009990.036.67%135973.128.82%motif file (matrix) pdf
61Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-160-3.690e+020.000010724.039.36%148105.531.39%motif file (matrix) pdf
62SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-157-3.625e+020.00007840.028.78%102156.621.65%motif file (matrix) pdf
63ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer1e-157-3.617e+020.00008934.032.79%119500.725.32%motif file (matrix) pdf
64MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-150-3.471e+020.00007211.026.47%93008.119.71%motif file (matrix) pdf
65Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-149-3.451e+020.00007258.026.64%93825.919.88%motif file (matrix) pdf
66PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-149-3.442e+020.00006325.023.22%79486.316.84%motif file (matrix) pdf
67Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-148-3.418e+020.00008313.030.51%110549.723.43%motif file (matrix) pdf
68ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-147-3.406e+020.00006283.023.06%78988.516.74%motif file (matrix) pdf
69GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-147-3.391e+020.00006217.022.82%78044.116.54%motif file (matrix) pdf
70Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-145-3.353e+020.00007793.028.60%102635.721.75%motif file (matrix) pdf
71Unknown2/Drosophila-Promoters/Homer1e-141-3.258e+020.00007686.028.21%101386.321.49%motif file (matrix) pdf
72SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer1e-138-3.184e+020.00007034.025.82%91518.619.39%motif file (matrix) pdf
73Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-137-3.173e+020.00007102.026.07%92625.019.63%motif file (matrix) pdf
74TATA-Box(TBP)/Promoter/Homer1e-136-3.139e+020.00007624.027.98%100963.321.40%motif file (matrix) pdf
75Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-136-3.136e+020.00007867.028.88%104814.822.21%motif file (matrix) pdf
76Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-134-3.091e+020.00008929.032.77%121981.125.85%motif file (matrix) pdf
77Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-133-3.080e+020.00008572.031.46%116305.324.65%motif file (matrix) pdf
78Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer1e-132-3.048e+020.00006458.023.70%83191.417.63%motif file (matrix) pdf
79Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-132-3.045e+020.000010908.040.04%154506.132.74%motif file (matrix) pdf
80SeqBias: TA-repeat1e-130-3.011e+020.000011887.043.63%170979.036.23%motif file (matrix) pdf
81AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-129-2.983e+020.00007391.027.13%98035.320.78%motif file (matrix) pdf
82ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-128-2.954e+020.00006562.024.09%85221.818.06%motif file (matrix) pdf
83Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-126-2.905e+020.00009058.033.25%125025.526.50%motif file (matrix) pdf
84NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer1e-124-2.876e+020.00006949.025.51%91608.219.41%motif file (matrix) pdf
85SeqBias: CG bias1e-122-2.829e+020.000026928.098.84%455476.996.52%motif file (matrix) pdf
86SeqBias: CG-repeat1e-121-2.798e+020.000014368.052.74%214376.445.43%motif file (matrix) pdf
87Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer1e-120-2.776e+020.00004923.018.07%60955.712.92%motif file (matrix) pdf
88RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer1e-120-2.774e+020.00009992.036.68%140946.029.87%motif file (matrix) pdf
89Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-119-2.741e+020.00007315.026.85%98015.820.77%motif file (matrix) pdf
90Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-117-2.712e+020.00004545.016.68%55557.611.77%motif file (matrix) pdf
91EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-116-2.681e+020.00005020.018.43%62803.213.31%motif file (matrix) pdf
92Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-116-2.677e+020.00004896.017.97%60953.112.92%motif file (matrix) pdf
93Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-116-2.675e+020.00007079.025.98%94626.320.05%motif file (matrix) pdf
94Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-116-2.674e+020.00007927.029.10%108078.122.90%motif file (matrix) pdf
95NFY(CCAAT)/Promoter/Homer1e-114-2.634e+020.00005318.019.52%67520.214.31%motif file (matrix) pdf
96EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-114-2.633e+020.00008344.030.63%114972.424.36%motif file (matrix) pdf
97Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-113-2.609e+020.00005679.020.84%73152.315.50%motif file (matrix) pdf
98E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-111-2.572e+020.00009910.036.37%140767.629.83%motif file (matrix) pdf
99MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-110-2.547e+020.00005732.021.04%74249.415.73%motif file (matrix) pdf
100BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-110-2.538e+020.000010110.037.11%144258.330.57%motif file (matrix) pdf
101Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-108-2.503e+020.00004825.017.71%60606.712.84%motif file (matrix) pdf
102PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-108-2.493e+020.00004355.015.99%53594.311.36%motif file (matrix) pdf
103Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-107-2.468e+020.00005560.020.41%71969.615.25%motif file (matrix) pdf
104DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer1e-107-2.464e+020.00008868.032.55%124379.426.36%motif file (matrix) pdf
105SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer1e-106-2.463e+020.00006871.025.22%92417.019.59%motif file (matrix) pdf
106Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-105-2.433e+020.00005702.020.93%74319.515.75%motif file (matrix) pdf
107EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-105-2.419e+020.00005237.019.22%67237.614.25%motif file (matrix) pdf
108EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer1e-103-2.374e+020.00006654.024.42%89457.618.96%motif file (matrix) pdf
109Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-102-2.359e+020.00004360.016.00%54216.911.49%motif file (matrix) pdf
110Unknown4/Arabidopsis-Promoters/Homer1e-102-2.357e+020.00006861.025.18%92814.019.67%motif file (matrix) pdf
111PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer1e-100-2.321e+020.00008978.032.95%127007.826.92%motif file (matrix) pdf
112Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-94-2.177e+020.00003858.014.16%47473.810.06%motif file (matrix) pdf
113STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-93-2.149e+020.00005480.020.11%72264.015.31%motif file (matrix) pdf
114AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-93-2.148e+020.00003919.014.38%48502.710.28%motif file (matrix) pdf
115MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-91-2.098e+020.00005878.021.58%78718.016.68%motif file (matrix) pdf
116TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-90-2.083e+020.00004571.016.78%58610.212.42%motif file (matrix) pdf
117Tal11e-88-2.047e+020.00007805.028.65%109643.623.24%motif file (matrix) pdf
118KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer1e-87-2.013e+020.00005129.018.83%67508.514.31%motif file (matrix) pdf
119HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer1e-86-1.993e+020.00005161.018.94%68104.414.43%motif file (matrix) pdf
120MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-86-1.987e+020.00005076.018.63%66817.014.16%motif file (matrix) pdf
121ETS(ETS)/Promoter/Homer1e-85-1.969e+020.00004345.015.95%55700.411.80%motif file (matrix) pdf
122RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-85-1.969e+020.00006684.024.53%92145.319.53%motif file (matrix) pdf
123Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-84-1.956e+020.00004166.015.29%53046.811.24%motif file (matrix) pdf
124Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-84-1.955e+020.00005461.020.04%72954.215.46%motif file (matrix) pdf
125RLR1?/SacCer-Promoters/Homer1e-83-1.922e+020.00005389.019.78%72008.915.26%motif file (matrix) pdf
126Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-81-1.888e+020.00005493.020.16%73813.315.64%motif file (matrix) pdf
127E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-81-1.878e+020.00006124.022.48%83785.617.76%motif file (matrix) pdf
128NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-81-1.874e+020.00004741.017.40%62215.713.18%motif file (matrix) pdf
129Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer1e-81-1.874e+020.00003944.014.48%50064.710.61%motif file (matrix) pdf
130E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-81-1.872e+020.00005638.020.69%76167.816.14%motif file (matrix) pdf
131CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-81-1.868e+020.00003998.014.67%50906.310.79%motif file (matrix) pdf
132Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-80-1.851e+020.00006832.025.08%95200.420.17%motif file (matrix) pdf
133Sp1(Zf)/Promoter/Homer1e-80-1.845e+020.00005367.019.70%72076.715.27%motif file (matrix) pdf
134HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer1e-79-1.822e+020.00004585.016.83%60076.612.73%motif file (matrix) pdf
135BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-78-1.808e+020.00003445.012.64%42869.39.08%motif file (matrix) pdf
136PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-78-1.800e+020.00003525.012.94%44097.59.35%motif file (matrix) pdf
137bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-78-1.800e+020.00002810.010.31%33547.97.11%motif file (matrix) pdf
138Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-77-1.788e+020.00003182.011.68%39050.68.28%motif file (matrix) pdf
139Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-77-1.784e+020.00004124.015.14%53207.911.28%motif file (matrix) pdf
140Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-75-1.749e+020.00003458.012.69%43320.09.18%motif file (matrix) pdf
141Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-75-1.742e+020.00004661.017.11%61654.813.07%motif file (matrix) pdf
142Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer1e-75-1.732e+020.00004115.015.10%53321.411.30%motif file (matrix) pdf
143Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-75-1.727e+020.00004775.017.53%63494.313.46%motif file (matrix) pdf
144Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-74-1.707e+020.00003805.013.97%48730.810.33%motif file (matrix) pdf
145CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-73-1.696e+020.00003533.012.97%44679.29.47%motif file (matrix) pdf
146Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-71-1.655e+020.00004834.017.74%64796.513.73%motif file (matrix) pdf
147Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-71-1.654e+020.00005006.018.37%67482.214.30%motif file (matrix) pdf
148c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-71-1.652e+020.00004377.016.07%57738.612.24%motif file (matrix) pdf
149Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-71-1.641e+020.00004672.017.15%62354.213.21%motif file (matrix) pdf
150NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-71-1.638e+020.00003472.012.74%44024.19.33%motif file (matrix) pdf
151FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-70-1.632e+020.00006095.022.37%84778.017.97%motif file (matrix) pdf
152RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-70-1.626e+020.00004638.017.02%61909.013.12%motif file (matrix) pdf
153Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-70-1.625e+020.00002956.010.85%36387.37.71%motif file (matrix) pdf
154Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-70-1.612e+020.00006154.022.59%85841.418.19%motif file (matrix) pdf
155Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-67-1.565e+020.00003743.013.74%48470.110.27%motif file (matrix) pdf
156Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-67-1.565e+020.00002830.010.39%34777.47.37%motif file (matrix) pdf
157ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer1e-67-1.559e+020.00004309.015.82%57176.712.12%motif file (matrix) pdf
158ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer1e-67-1.554e+020.00004756.017.46%64135.813.59%motif file (matrix) pdf
159Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-67-1.547e+020.00002588.09.50%31294.86.63%motif file (matrix) pdf
160FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-65-1.510e+020.00005423.019.91%74867.115.87%motif file (matrix) pdf
161TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-65-1.501e+020.00003167.011.62%40071.68.49%motif file (matrix) pdf
162ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer1e-64-1.494e+020.00003179.011.67%40284.38.54%motif file (matrix) pdf
163PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer1e-64-1.487e+020.00007231.026.54%103990.822.04%motif file (matrix) pdf
164Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-64-1.485e+020.00004639.017.03%62700.113.29%motif file (matrix) pdf
165FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer1e-63-1.466e+020.00003716.013.64%48549.510.29%motif file (matrix) pdf
166IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-63-1.461e+020.00002808.010.31%34893.17.39%motif file (matrix) pdf
167HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer1e-63-1.461e+020.00004928.018.09%67364.414.28%motif file (matrix) pdf
168Unknown5/Drosophila-Promoters/Homer1e-63-1.456e+020.00003275.012.02%41903.18.88%motif file (matrix) pdf
169SeqBias: polyA-repeat1e-63-1.453e+020.000027171.099.73%466160.798.79%motif file (matrix) pdf
170ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer1e-63-1.451e+020.00003259.011.96%41688.98.83%motif file (matrix) pdf
171Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer1e-62-1.436e+020.00003168.011.63%40388.28.56%motif file (matrix) pdf
172USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-62-1.429e+020.00003423.012.56%44276.59.38%motif file (matrix) pdf
173HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-61-1.415e+020.00002921.010.72%36778.17.79%motif file (matrix) pdf
174Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-61-1.406e+020.00002566.09.42%31550.66.69%motif file (matrix) pdf
175E-box/Arabidopsis-Promoters/Homer1e-60-1.398e+020.00003518.012.91%45874.89.72%motif file (matrix) pdf
176SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-60-1.397e+020.00002280.08.37%27398.95.81%motif file (matrix) pdf
177PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-60-1.397e+020.00001732.06.36%19556.84.14%motif file (matrix) pdf
178PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-60-1.393e+020.00002981.010.94%37778.18.01%motif file (matrix) pdf
179HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-59-1.381e+020.00002933.010.77%37115.17.87%motif file (matrix) pdf
180RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-59-1.379e+020.00005383.019.76%75048.915.90%motif file (matrix) pdf
181Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-59-1.370e+020.00002335.08.57%28306.86.00%motif file (matrix) pdf
182LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer1e-58-1.355e+020.00003920.014.39%52270.711.08%motif file (matrix) pdf
183ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer1e-58-1.349e+020.00005728.021.02%80733.617.11%motif file (matrix) pdf
184Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-58-1.344e+020.00003139.011.52%40387.28.56%motif file (matrix) pdf
185Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-58-1.343e+020.00002787.010.23%35103.27.44%motif file (matrix) pdf
186CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-58-1.342e+020.00003063.011.24%39251.18.32%motif file (matrix) pdf
187Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-58-1.340e+020.00003960.014.54%52967.711.22%motif file (matrix) pdf
188Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-57-1.329e+020.00003704.013.60%49083.110.40%motif file (matrix) pdf
189Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-57-1.321e+020.00002740.010.06%34502.27.31%motif file (matrix) pdf
190TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-56-1.295e+020.00002738.010.05%34590.37.33%motif file (matrix) pdf
191Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer1e-55-1.286e+020.00002410.08.85%29758.56.31%motif file (matrix) pdf
192NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-54-1.249e+020.00002615.09.60%32963.76.99%motif file (matrix) pdf
193LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer1e-53-1.229e+020.00004816.017.68%67026.014.20%motif file (matrix) pdf
194FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-52-1.218e+020.00005072.018.62%71155.315.08%motif file (matrix) pdf
195Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer1e-52-1.216e+020.00002008.07.37%24159.35.12%motif file (matrix) pdf
196RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-51-1.194e+020.00004970.018.24%69693.914.77%motif file (matrix) pdf
197CHR(?)/Hela-CellCycle-Expression/Homer1e-50-1.174e+020.00003378.012.40%44913.79.52%motif file (matrix) pdf
198PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer1e-50-1.169e+020.00006257.022.97%90507.419.18%motif file (matrix) pdf
199bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-50-1.168e+020.00002516.09.24%31862.66.75%motif file (matrix) pdf
200EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-50-1.166e+020.00001818.06.67%21603.94.58%motif file (matrix) pdf
201Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer1e-50-1.163e+020.00002109.07.74%25852.35.48%motif file (matrix) pdf
202caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer1e-50-1.162e+020.00003701.013.58%49965.810.59%motif file (matrix) pdf
203Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-49-1.144e+020.00004085.014.99%56058.011.88%motif file (matrix) pdf
204Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-49-1.140e+020.00001966.07.22%23854.35.06%motif file (matrix) pdf
205ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer1e-48-1.121e+020.00002035.07.47%24945.95.29%motif file (matrix) pdf
206NRF(NRF)/Promoter/Homer1e-47-1.099e+020.00002557.09.39%32804.56.95%motif file (matrix) pdf
207Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-47-1.094e+020.00001584.05.81%18516.43.92%motif file (matrix) pdf
208HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer1e-46-1.082e+020.00002943.010.80%38748.38.21%motif file (matrix) pdf
209ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer1e-46-1.062e+020.00001751.06.43%21042.64.46%motif file (matrix) pdf
210STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-45-1.053e+020.00003002.011.02%39806.28.44%motif file (matrix) pdf
211THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer1e-45-1.042e+020.00002967.010.89%39329.98.33%motif file (matrix) pdf
212STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-44-1.015e+020.00002917.010.71%38714.18.20%motif file (matrix) pdf
213RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-43-1.004e+020.00001228.04.51%13799.22.92%motif file (matrix) pdf
214IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-43-9.984e+010.00001278.04.69%14520.63.08%motif file (matrix) pdf
215Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-43-9.970e+010.00001982.07.27%24703.05.24%motif file (matrix) pdf
216E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-43-9.924e+010.00003134.011.50%42179.48.94%motif file (matrix) pdf
217FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-42-9.897e+010.00004138.015.19%57889.312.27%motif file (matrix) pdf
218HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-42-9.815e+010.00002339.08.59%30105.16.38%motif file (matrix) pdf
219Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-42-9.803e+010.00001484.05.45%17511.23.71%motif file (matrix) pdf
220Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer1e-42-9.785e+010.00002018.07.41%25320.15.37%motif file (matrix) pdf
221Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer1e-42-9.733e+010.00001655.06.07%20009.04.24%motif file (matrix) pdf
222Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-41-9.625e+010.00002943.010.80%39407.98.35%motif file (matrix) pdf
223PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-41-9.622e+010.00002028.07.44%25544.65.41%motif file (matrix) pdf
224p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-41-9.621e+010.00002111.07.75%26781.75.68%motif file (matrix) pdf
225NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-41-9.465e+010.00002410.08.85%31355.86.64%motif file (matrix) pdf
226Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-40-9.378e+010.00004638.017.02%66200.014.03%motif file (matrix) pdf
227c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-40-9.312e+010.00001734.06.36%21339.84.52%motif file (matrix) pdf
228EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-40-9.230e+010.00001869.06.86%23365.94.95%motif file (matrix) pdf
229Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-39-9.207e+010.00001678.06.16%20563.34.36%motif file (matrix) pdf
230GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer1e-39-9.129e+010.00002038.07.48%25926.85.49%motif file (matrix) pdf
231Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-39-9.124e+010.00002068.07.59%26377.65.59%motif file (matrix) pdf
232PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-39-9.049e+010.00002761.010.13%36938.77.83%motif file (matrix) pdf
233Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer1e-38-8.969e+010.00002291.08.41%29811.96.32%motif file (matrix) pdf
234n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-38-8.948e+010.00005198.019.08%75522.716.00%motif file (matrix) pdf
235SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer1e-38-8.782e+010.00001827.06.71%22948.74.86%motif file (matrix) pdf
236PCF/Arabidopsis-Promoters/Homer1e-38-8.771e+010.00001181.04.33%13575.62.88%motif file (matrix) pdf
237FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer1e-38-8.763e+010.00002539.09.32%33696.97.14%motif file (matrix) pdf
238ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer1e-37-8.720e+010.00002591.09.51%34516.97.31%motif file (matrix) pdf
239Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-37-8.654e+010.00002373.08.71%31223.36.62%motif file (matrix) pdf
240Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-37-8.622e+010.00002206.08.10%28706.86.08%motif file (matrix) pdf
241TATA-box/SacCer-Promoters/Homer1e-37-8.530e+010.00002244.08.24%29331.06.22%motif file (matrix) pdf
242HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer1e-36-8.484e+010.00002028.07.44%26093.35.53%motif file (matrix) pdf
243RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-36-8.453e+010.00002063.07.57%26635.35.64%motif file (matrix) pdf
244Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-36-8.425e+010.00001459.05.36%17696.33.75%motif file (matrix) pdf
245Unknown3/Arabidopsis-Promoters/Homer1e-35-8.230e+010.00001508.05.54%18493.63.92%motif file (matrix) pdf
246Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer1e-35-8.089e+010.00001480.05.43%18144.43.85%motif file (matrix) pdf
247IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-34-7.912e+010.00001040.03.82%11889.32.52%motif file (matrix) pdf
248NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-33-7.805e+010.00005404.019.84%79817.216.91%motif file (matrix) pdf
249E-box/Drosophila-Promoters/Homer1e-33-7.637e+010.00001469.05.39%18180.53.85%motif file (matrix) pdf
250ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer1e-32-7.598e+010.00001711.06.28%21783.14.62%motif file (matrix) pdf
251Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-32-7.516e+010.00001438.05.28%17778.43.77%motif file (matrix) pdf
252Unknown6/Drosophila-Promoters/Homer1e-32-7.451e+010.00004310.015.82%62435.013.23%motif file (matrix) pdf
253FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-32-7.435e+010.00002221.08.15%29582.06.27%motif file (matrix) pdf
254Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer1e-32-7.383e+010.00003180.011.67%44513.59.43%motif file (matrix) pdf
255CRE(bZIP)/Promoter/Homer1e-31-7.322e+010.00001953.07.17%25564.55.42%motif file (matrix) pdf
256Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-31-7.284e+010.00002235.08.20%29884.66.33%motif file (matrix) pdf
257Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer1e-31-7.271e+010.00001650.06.06%21032.14.46%motif file (matrix) pdf
258ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer1e-31-7.247e+010.00002904.010.66%40275.38.54%motif file (matrix) pdf
259IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-30-6.992e+010.0000777.02.85%8532.91.81%motif file (matrix) pdf
260VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-29-6.780e+010.00001316.04.83%16313.43.46%motif file (matrix) pdf
261ABF1/SacCer-Promoters/Homer1e-29-6.725e+010.00001571.05.77%20121.14.26%motif file (matrix) pdf
262Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer1e-29-6.713e+010.00001244.04.57%15287.43.24%motif file (matrix) pdf
263STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-29-6.689e+010.00002000.07.34%26631.15.64%motif file (matrix) pdf
264Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-28-6.524e+010.00001444.05.30%18325.93.88%motif file (matrix) pdf
265ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-28-6.508e+010.0000996.03.66%11780.82.50%motif file (matrix) pdf
266Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-27-6.432e+010.00002499.09.17%34496.57.31%motif file (matrix) pdf
267CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer1e-27-6.323e+010.00001550.05.69%20010.34.24%motif file (matrix) pdf
268NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer1e-27-6.234e+010.00001125.04.13%13756.72.92%motif file (matrix) pdf
269Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-26-6.195e+010.00001507.05.53%19430.24.12%motif file (matrix) pdf
270TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-26-6.101e+010.0000815.02.99%9360.01.98%motif file (matrix) pdf
271ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer1e-26-6.082e+010.00001255.04.61%15732.23.33%motif file (matrix) pdf
272PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer1e-26-6.055e+010.00001477.05.42%19052.84.04%motif file (matrix) pdf
273Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-26-6.025e+010.00001161.04.26%14374.93.05%motif file (matrix) pdf
274E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-25-5.954e+010.00001596.05.86%20898.64.43%motif file (matrix) pdf
275Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-25-5.892e+010.00001167.04.28%14522.23.08%motif file (matrix) pdf
276STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-25-5.760e+010.00001703.06.25%22633.04.80%motif file (matrix) pdf
277Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-24-5.741e+010.0000886.03.25%10502.92.23%motif file (matrix) pdf
278HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-24-5.687e+010.00001321.04.85%16903.53.58%motif file (matrix) pdf
279MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-24-5.610e+010.00001442.05.29%18758.63.98%motif file (matrix) pdf
280Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-24-5.556e+010.00001214.04.46%15374.93.26%motif file (matrix) pdf
281CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer1e-24-5.550e+010.00002198.08.07%30398.66.44%motif file (matrix) pdf
282RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-24-5.545e+010.0000560.02.06%6008.31.27%motif file (matrix) pdf
283ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-23-5.459e+010.0000584.02.14%6361.81.35%motif file (matrix) pdf
284Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-23-5.392e+010.00001366.05.01%17729.93.76%motif file (matrix) pdf
285Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-22-5.254e+010.00001315.04.83%17035.63.61%motif file (matrix) pdf
286RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-22-5.210e+010.0000830.03.05%9909.02.10%motif file (matrix) pdf
287E-box(bHLH)/Promoter/Homer1e-22-5.197e+010.0000873.03.20%10533.92.23%motif file (matrix) pdf
288PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-21-5.002e+010.0000649.02.38%7413.11.57%motif file (matrix) pdf
289REB1/SacCer-Promoters/Homer1e-21-4.987e+010.00001182.04.34%15179.83.22%motif file (matrix) pdf
290Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-21-4.968e+010.0000946.03.47%11694.62.48%motif file (matrix) pdf
291HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-21-4.886e+010.00001083.03.98%13754.22.91%motif file (matrix) pdf
292NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-21-4.858e+010.0000944.03.46%11714.52.48%motif file (matrix) pdf
293PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-20-4.773e+010.0000885.03.25%10888.52.31%motif file (matrix) pdf
294c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-20-4.769e+010.00003557.013.06%52649.811.16%motif file (matrix) pdf
295TOD6?/SacCer-Promoters/Homer1e-20-4.727e+010.00001112.04.08%14265.33.02%motif file (matrix) pdf
296ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer1e-20-4.718e+010.00001267.04.65%16599.03.52%motif file (matrix) pdf
297GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer1e-20-4.680e+010.0000864.03.17%10622.52.25%motif file (matrix) pdf
298Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-19-4.562e+010.0000844.03.10%10382.12.20%motif file (matrix) pdf
299GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-19-4.460e+010.0000614.02.25%7114.51.51%motif file (matrix) pdf
300Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-19-4.435e+010.00001462.05.37%19734.94.18%motif file (matrix) pdf
301Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer1e-18-4.298e+010.0000833.03.06%10339.62.19%motif file (matrix) pdf
302YY1(Zf)/Promoter/Homer1e-18-4.169e+010.00001003.03.68%12921.22.74%motif file (matrix) pdf
303NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-17-4.083e+010.0000467.01.71%5188.51.10%motif file (matrix) pdf
304Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-17-4.069e+010.00001325.04.86%17858.33.78%motif file (matrix) pdf
305PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-17-4.061e+010.0000841.03.09%10566.42.24%motif file (matrix) pdf
306MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer1e-17-4.006e+010.00001059.03.89%13849.92.94%motif file (matrix) pdf
307GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-17-3.915e+010.00001322.04.85%17908.13.80%motif file (matrix) pdf
308Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-16-3.896e+010.00001094.04.02%14439.73.06%motif file (matrix) pdf
309Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-16-3.879e+010.00004348.015.96%66493.414.09%motif file (matrix) pdf
310Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-16-3.867e+010.0000913.03.35%11731.42.49%motif file (matrix) pdf
311Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer1e-16-3.863e+010.0000928.03.41%11957.92.53%motif file (matrix) pdf
312ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer1e-16-3.851e+010.0000663.02.43%8055.01.71%motif file (matrix) pdf
313DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer1e-16-3.769e+010.00001094.04.02%14513.03.08%motif file (matrix) pdf
314RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-16-3.748e+010.0000629.02.31%7607.01.61%motif file (matrix) pdf
315Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-16-3.726e+010.0000838.03.08%10684.92.26%motif file (matrix) pdf
316X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-15-3.673e+010.0000749.02.75%9392.11.99%motif file (matrix) pdf
317Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer1e-15-3.614e+010.00001215.04.46%16454.33.49%motif file (matrix) pdf
318ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-15-3.503e+010.0000613.02.25%7478.41.58%motif file (matrix) pdf
319PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer1e-14-3.403e+010.0000546.02.00%6551.71.39%motif file (matrix) pdf
320JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-14-3.378e+010.0000686.02.52%8602.61.82%motif file (matrix) pdf
321DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer1e-14-3.269e+010.0000933.03.42%12356.42.62%motif file (matrix) pdf
322GFY(?)/Promoter/Homer1e-13-3.090e+010.0000754.02.77%9756.82.07%motif file (matrix) pdf
323ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer1e-13-3.068e+010.0000647.02.37%8174.31.73%motif file (matrix) pdf
324GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-13-3.047e+010.0000659.02.42%8362.11.77%motif file (matrix) pdf
325Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer1e-13-3.015e+010.0000355.01.30%3989.90.85%motif file (matrix) pdf
326PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer1e-12-2.925e+010.00001151.04.22%15921.93.37%motif file (matrix) pdf
327CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-12-2.857e+010.0000605.02.22%7655.81.62%motif file (matrix) pdf
328p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer1e-12-2.802e+010.0000477.01.75%5804.51.23%motif file (matrix) pdf
329p53(p53)/Saos-p53-ChIP-Seq/Homer1e-12-2.802e+010.0000477.01.75%5804.51.23%motif file (matrix) pdf
330ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer1e-12-2.792e+010.0000413.01.52%4887.41.04%motif file (matrix) pdf
331TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-11-2.684e+010.0000513.01.88%6381.61.35%motif file (matrix) pdf
332OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-11-2.641e+010.0000764.02.80%10156.12.15%motif file (matrix) pdf
333Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-10-2.356e+010.0000329.01.21%3858.60.82%motif file (matrix) pdf
334GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer1e-10-2.311e+010.0000504.01.85%6426.71.36%motif file (matrix) pdf
335FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-9-2.295e+010.0000514.01.89%6583.11.40%motif file (matrix) pdf
336E2F(E2F)/Hela-CellCycle-Expression/Homer1e-9-2.207e+010.0000670.02.46%8984.51.90%motif file (matrix) pdf
337ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-9-2.074e+010.0000633.02.32%8501.61.80%motif file (matrix) pdf
338Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-8-2.056e+010.0000589.02.16%7842.71.66%motif file (matrix) pdf
339AARE(HLH)/mES-cMyc-ChIP-Seq/Homer1e-8-2.025e+010.0000349.01.28%4280.00.91%motif file (matrix) pdf
340Unknown1/Arabidopsis-Promoters/Homer1e-8-2.010e+010.0000446.01.64%5715.81.21%motif file (matrix) pdf
341NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-8-1.981e+010.0000342.01.26%4197.80.89%motif file (matrix) pdf
342GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-8-1.944e+010.0000803.02.95%11210.32.38%motif file (matrix) pdf
343HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer1e-8-1.882e+010.0000412.01.51%5275.01.12%motif file (matrix) pdf
344ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-7-1.809e+010.00001681.06.17%25340.35.37%motif file (matrix) pdf
345Unknown4/Drosophila-Promoters/Homer1e-7-1.804e+010.0000507.01.86%6745.01.43%motif file (matrix) pdf
346T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer1e-7-1.733e+010.0000120.00.44%1184.20.25%motif file (matrix) pdf
347Unknown3/Drosophila-Promoters/Homer1e-7-1.682e+010.0000664.02.44%9237.81.96%motif file (matrix) pdf
348ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer1e-7-1.652e+010.0000482.01.77%6455.91.37%motif file (matrix) pdf
349LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer1e-7-1.615e+010.0000311.01.14%3909.80.83%motif file (matrix) pdf
350Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-6-1.483e+010.0000300.01.10%3810.00.81%motif file (matrix) pdf
351GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-6-1.480e+010.0000341.01.25%4422.60.94%motif file (matrix) pdf
352EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer1e-5-1.301e+010.0000119.00.44%1286.30.27%motif file (matrix) pdf
353EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer1e-5-1.293e+010.0000205.00.75%2503.60.53%motif file (matrix) pdf
354p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-5-1.266e+010.0000135.00.50%1517.10.32%motif file (matrix) pdf
355ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer1e-5-1.231e+010.0000149.00.55%1725.50.37%motif file (matrix) pdf
356GFX(?)/Promoter/Homer1e-5-1.230e+010.0000237.00.87%3000.70.64%motif file (matrix) pdf
357GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-5-1.216e+010.0000291.01.07%3814.00.81%motif file (matrix) pdf
358ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer1e-4-1.110e+010.0000748.02.75%11043.02.34%motif file (matrix) pdf
359RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-4-1.069e+010.0000175.00.64%2163.90.46%motif file (matrix) pdf
360NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-4-1.058e+010.0000239.00.88%3118.00.66%motif file (matrix) pdf
361TATA-box/Drosophila-Promoters/Homer1e-4-1.014e+010.0000337.01.24%4637.00.98%motif file (matrix) pdf
362SFP1/SacCer-Promoters/Homer1e-4-9.743e+000.0001413.01.52%5849.01.24%motif file (matrix) pdf
363Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-3-8.638e+000.000294.00.35%1080.40.23%motif file (matrix) pdf
364GFY-Staf(?,Zf)/Promoter/Homer1e-3-8.252e+000.0003708.02.60%10701.92.27%motif file (matrix) pdf
365Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-3-8.128e+000.0003520.01.91%7685.41.63%motif file (matrix) pdf
366Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-3-8.074e+000.0003334.01.23%4739.21.00%motif file (matrix) pdf
367Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer1e-3-7.895e+000.0004299.01.10%4205.40.89%motif file (matrix) pdf
368DREF/Drosophila-Promoters/Homer1e-2-5.605e+000.003956.00.21%649.70.14%motif file (matrix) pdf