Homer Known Motif Enrichment Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/ZF6/out/peak/idr/pseudo_reps/rep1/ZF6_rep1-pr.IDR0.05.HomerResults)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 28258, Total Background Sequences = 466524
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1SeqBias: CA-repeat1e-445-1.027e+030.000024861.087.98%360156.877.20%motif file (matrix) pdf
2SeqBias: GA-repeat1e-437-1.008e+030.000027017.095.62%409270.487.73%motif file (matrix) pdf
3AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-423-9.751e+020.000020793.073.59%283521.560.77%motif file (matrix) pdf
4Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-396-9.139e+020.000019439.068.80%261499.956.05%motif file (matrix) pdf
5GAGA-repeat/SacCer-Promoters/Homer1e-393-9.071e+020.000021398.075.73%296755.763.61%motif file (matrix) pdf
6Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-371-8.544e+020.000019309.068.34%261272.556.00%motif file (matrix) pdf
7Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-370-8.525e+020.000017323.061.31%227375.148.74%motif file (matrix) pdf
8SUT1?/SacCer-Promoters/Homer1e-357-8.225e+020.000027152.096.09%417102.889.41%motif file (matrix) pdf
9ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-355-8.176e+020.000012707.044.97%154184.033.05%motif file (matrix) pdf
10KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-354-8.168e+020.000018098.064.05%241737.451.82%motif file (matrix) pdf
11ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-338-7.799e+020.000012950.045.83%159205.634.13%motif file (matrix) pdf
12SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-332-7.647e+020.000022889.081.01%329353.870.60%motif file (matrix) pdf
13ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-327-7.537e+020.000015184.053.74%195624.941.93%motif file (matrix) pdf
14Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-327-7.537e+020.000015382.054.44%198839.242.62%motif file (matrix) pdf
15Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-319-7.346e+020.000018325.064.85%248624.653.29%motif file (matrix) pdf
16Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-318-7.340e+020.000011776.041.68%142633.330.57%motif file (matrix) pdf
17KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-311-7.179e+020.000014662.051.89%188502.540.41%motif file (matrix) pdf
18Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer1e-304-7.011e+020.000015471.054.75%202233.843.35%motif file (matrix) pdf
19Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-300-6.920e+020.000017048.060.33%228643.849.01%motif file (matrix) pdf
20CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-297-6.845e+020.000012317.043.59%152679.032.73%motif file (matrix) pdf
21Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-281-6.492e+020.000014507.051.34%188599.340.43%motif file (matrix) pdf
22IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer1e-278-6.419e+020.000014609.051.70%190529.340.84%motif file (matrix) pdf
23Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-276-6.364e+020.000016728.059.20%225486.448.33%motif file (matrix) pdf
24Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer1e-276-6.363e+020.000013181.046.65%167966.736.00%motif file (matrix) pdf
25EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-276-6.356e+020.000010462.037.03%126052.227.02%motif file (matrix) pdf
26Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-270-6.224e+020.000011873.042.02%148063.031.74%motif file (matrix) pdf
27Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer1e-268-6.172e+020.000019338.068.44%270708.558.03%motif file (matrix) pdf
28GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-263-6.060e+020.00009571.033.87%113739.824.38%motif file (matrix) pdf
29ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-262-6.034e+020.000010074.035.65%121342.326.01%motif file (matrix) pdf
30Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-260-6.006e+020.000012186.043.13%153740.832.95%motif file (matrix) pdf
31PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer1e-259-5.971e+020.000015623.055.29%208818.144.76%motif file (matrix) pdf
32NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-255-5.890e+020.000011200.039.64%138945.329.78%motif file (matrix) pdf
33Initiator/Drosophila-Promoters/Homer1e-255-5.890e+020.000012900.045.65%165367.335.45%motif file (matrix) pdf
34Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)1e-252-5.820e+020.00008651.030.62%100980.821.65%motif file (matrix) pdf
35Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-246-5.687e+020.000013842.048.99%181139.538.83%motif file (matrix) pdf
36Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-244-5.628e+020.000016748.059.27%228876.549.06%motif file (matrix) pdf
37Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-243-5.607e+020.000010924.038.66%135787.329.11%motif file (matrix) pdf
38SeqBias: A/T bias1e-241-5.572e+020.000025127.088.93%380309.681.52%motif file (matrix) pdf
39ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-238-5.499e+020.000010359.036.66%127586.927.35%motif file (matrix) pdf
40GAGA-repeat/Arabidopsis-Promoters/Homer1e-233-5.388e+020.00009158.032.41%109957.623.57%motif file (matrix) pdf
41Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-233-5.380e+020.000011053.039.12%138637.429.72%motif file (matrix) pdf
42HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer1e-232-5.354e+020.000013698.048.48%180220.438.63%motif file (matrix) pdf
43PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-229-5.284e+020.000012800.045.30%166243.235.63%motif file (matrix) pdf
44Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-222-5.131e+020.000010101.035.75%125077.126.81%motif file (matrix) pdf
45ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer1e-221-5.092e+020.00009687.034.28%118969.925.50%motif file (matrix) pdf
46PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-218-5.024e+020.00009782.034.62%120663.325.86%motif file (matrix) pdf
47Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-217-4.999e+020.000011002.038.94%139372.029.87%motif file (matrix) pdf
48AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-216-4.996e+020.000010525.037.25%132064.328.31%motif file (matrix) pdf
49Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer1e-215-4.972e+020.000012928.045.75%169594.136.35%motif file (matrix) pdf
50SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-213-4.922e+020.00008460.029.94%101300.421.71%motif file (matrix) pdf
51MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-212-4.896e+020.000012104.042.84%156929.633.64%motif file (matrix) pdf
52HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-210-4.846e+020.00009572.033.88%118181.225.33%motif file (matrix) pdf
53Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-206-4.754e+020.00008094.028.65%96524.620.69%motif file (matrix) pdf
54Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-204-4.715e+020.000010849.038.40%138183.129.62%motif file (matrix) pdf
55Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-204-4.707e+020.000013363.047.29%177683.738.09%motif file (matrix) pdf
56Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-200-4.623e+020.00007976.028.23%95267.620.42%motif file (matrix) pdf
57E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-199-4.602e+020.000010982.038.87%140713.430.16%motif file (matrix) pdf
58ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer1e-198-4.580e+020.00009096.032.19%112063.724.02%motif file (matrix) pdf
59Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-198-4.563e+020.000014367.050.85%194496.441.69%motif file (matrix) pdf
60KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer1e-198-4.562e+020.00007345.025.99%86274.718.49%motif file (matrix) pdf
61RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-192-4.427e+020.00007917.028.02%95126.820.39%motif file (matrix) pdf
62ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-187-4.306e+020.00007369.026.08%87546.718.77%motif file (matrix) pdf
63Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-186-4.305e+020.00009676.034.24%121942.926.14%motif file (matrix) pdf
64Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-186-4.298e+020.00009004.031.87%111811.023.97%motif file (matrix) pdf
65ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-186-4.285e+020.00006684.023.66%77701.616.66%motif file (matrix) pdf
66Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-185-4.270e+020.000011398.040.34%148629.831.86%motif file (matrix) pdf
67MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-177-4.093e+020.00007734.027.37%93705.720.09%motif file (matrix) pdf
68RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer1e-176-4.072e+020.000010580.037.44%136815.929.33%motif file (matrix) pdf
69AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-175-4.037e+020.000010317.036.51%132913.328.49%motif file (matrix) pdf
70BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-174-4.028e+020.000010104.035.76%129676.127.80%motif file (matrix) pdf
71Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-172-3.962e+020.00009223.032.64%116522.024.98%motif file (matrix) pdf
72Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-170-3.918e+020.00008527.030.18%106208.722.77%motif file (matrix) pdf
73AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-168-3.874e+020.00008201.029.02%101512.721.76%motif file (matrix) pdf
74PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-168-3.871e+020.00006611.023.40%78140.916.75%motif file (matrix) pdf
75Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-164-3.788e+020.00008376.029.64%104490.022.40%motif file (matrix) pdf
76E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-162-3.734e+020.000010751.038.05%141022.130.23%motif file (matrix) pdf
77Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-160-3.693e+020.00008456.029.93%106096.622.74%motif file (matrix) pdf
78EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-160-3.687e+020.00005809.020.56%67283.414.42%motif file (matrix) pdf
79Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-156-3.593e+020.00007389.026.15%90607.419.42%motif file (matrix) pdf
80Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-155-3.576e+020.000011291.039.96%150221.132.20%motif file (matrix) pdf
81SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer1e-153-3.535e+020.00007489.026.50%92324.219.79%motif file (matrix) pdf
82Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer1e-151-3.498e+020.00006872.024.32%83379.017.87%motif file (matrix) pdf
83Unknown2/Drosophila-Promoters/Homer1e-150-3.474e+020.00007986.028.26%99990.121.43%motif file (matrix) pdf
84SeqBias: CG-repeat1e-150-3.455e+020.000016046.056.79%227624.448.79%motif file (matrix) pdf
85GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-149-3.447e+020.00006152.021.77%73095.515.67%motif file (matrix) pdf
86TATA-Box(TBP)/Promoter/Homer1e-149-3.446e+020.00007651.027.08%95109.220.39%motif file (matrix) pdf
87GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-149-3.437e+020.00006974.024.68%85122.118.25%motif file (matrix) pdf
88BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-149-3.436e+020.000010630.037.62%140583.930.13%motif file (matrix) pdf
89NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer1e-148-3.426e+020.00007360.026.05%90868.019.48%motif file (matrix) pdf
90EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-147-3.401e+020.00009013.031.90%115833.824.83%motif file (matrix) pdf
91Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-145-3.349e+020.00007563.026.77%94214.620.20%motif file (matrix) pdf
92Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-142-3.287e+020.00008110.028.70%102681.322.01%motif file (matrix) pdf
93SeqBias: TA-repeat1e-142-3.275e+020.000011545.040.86%155745.833.38%motif file (matrix) pdf
94SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer1e-141-3.257e+020.00006969.024.66%85799.018.39%motif file (matrix) pdf
95MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-140-3.231e+020.00006281.022.23%75814.116.25%motif file (matrix) pdf
96ETS(ETS)/Promoter/Homer1e-138-3.195e+020.00004967.017.58%57084.012.24%motif file (matrix) pdf
97EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-138-3.189e+020.00005198.018.40%60379.612.94%motif file (matrix) pdf
98Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer1e-135-3.126e+020.00005145.018.21%59856.612.83%motif file (matrix) pdf
99STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-133-3.068e+020.00005776.020.44%69132.014.82%motif file (matrix) pdf
100Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-132-3.044e+020.00006156.021.79%74750.516.02%motif file (matrix) pdf
101Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-129-2.982e+020.00005881.020.81%70996.415.22%motif file (matrix) pdf
102PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-129-2.975e+020.00004570.016.17%52272.711.20%motif file (matrix) pdf
103Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-128-2.963e+020.00004561.016.14%52187.111.19%motif file (matrix) pdf
104NFY(CCAAT)/Promoter/Homer1e-127-2.927e+020.00005614.019.87%67350.714.44%motif file (matrix) pdf
105DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer1e-126-2.907e+020.00009935.035.16%132468.628.39%motif file (matrix) pdf
106Unknown4/Arabidopsis-Promoters/Homer1e-124-2.869e+020.00007268.025.72%91956.519.71%motif file (matrix) pdf
107Tal11e-124-2.864e+020.00008195.029.00%105953.322.71%motif file (matrix) pdf
108Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-121-2.801e+020.00004785.016.93%55946.611.99%motif file (matrix) pdf
109Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-121-2.797e+020.00005127.018.14%60847.013.04%motif file (matrix) pdf
110Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-118-2.734e+020.00004114.014.56%46734.210.02%motif file (matrix) pdf
111Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-118-2.732e+020.00006072.021.49%74839.216.04%motif file (matrix) pdf
112EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer1e-117-2.710e+020.00006586.023.31%82526.917.69%motif file (matrix) pdf
113Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-115-2.664e+020.00007471.026.44%95979.120.57%motif file (matrix) pdf
114MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-113-2.623e+020.00006233.022.06%77697.616.65%motif file (matrix) pdf
115SeqBias: CG bias1e-113-2.609e+020.000028007.099.12%453241.497.15%motif file (matrix) pdf
116Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-111-2.578e+020.00004806.017.01%57109.812.24%motif file (matrix) pdf
117TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-110-2.536e+020.00004785.016.93%56979.312.21%motif file (matrix) pdf
118Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-109-2.525e+020.00004937.017.47%59208.212.69%motif file (matrix) pdf
119Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-109-2.516e+020.00005610.019.85%69013.914.79%motif file (matrix) pdf
120E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-105-2.436e+020.00006873.024.32%88112.118.89%motif file (matrix) pdf
121RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-105-2.434e+020.00006872.024.32%88106.118.89%motif file (matrix) pdf
122Sp1(Zf)/Promoter/Homer1e-105-2.424e+020.00006120.021.66%76942.416.49%motif file (matrix) pdf
123MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-104-2.406e+020.00005365.018.99%65919.414.13%motif file (matrix) pdf
124Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-104-2.397e+020.00004838.017.12%58307.212.50%motif file (matrix) pdf
125PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer1e-103-2.381e+020.00008674.030.70%115811.824.82%motif file (matrix) pdf
126Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-102-2.362e+020.00004967.017.58%60319.312.93%motif file (matrix) pdf
127Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-102-2.360e+020.00005642.019.97%70182.815.04%motif file (matrix) pdf
128RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-101-2.331e+020.00004900.017.34%59483.312.75%motif file (matrix) pdf
129KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer1e-99-2.294e+020.00005074.017.96%62169.313.33%motif file (matrix) pdf
130NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-98-2.267e+020.00004840.017.13%58889.812.62%motif file (matrix) pdf
131E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-97-2.234e+020.00006301.022.30%80554.217.27%motif file (matrix) pdf
132Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer1e-96-2.226e+020.00004151.014.69%49158.710.54%motif file (matrix) pdf
133Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-95-2.189e+020.00004908.017.37%60217.612.91%motif file (matrix) pdf
134PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer1e-94-2.183e+020.00007652.027.08%101230.521.70%motif file (matrix) pdf
135AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-94-2.180e+020.00003940.013.94%46344.79.93%motif file (matrix) pdf
136Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-93-2.153e+020.00002782.09.85%30347.06.50%motif file (matrix) pdf
137Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer1e-93-2.149e+020.00004288.015.18%51432.911.02%motif file (matrix) pdf
138CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-92-2.135e+020.00004270.015.11%51231.610.98%motif file (matrix) pdf
139Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-92-2.134e+020.00004099.014.51%48788.510.46%motif file (matrix) pdf
140Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-92-2.130e+020.00004318.015.28%51943.711.13%motif file (matrix) pdf
141HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer1e-92-2.124e+020.00004781.016.92%58660.712.57%motif file (matrix) pdf
142RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-91-2.110e+020.00005642.019.97%71360.115.30%motif file (matrix) pdf
143PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-91-2.096e+020.00003590.012.71%41724.88.94%motif file (matrix) pdf
144Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-90-2.087e+020.00006648.023.53%86520.718.55%motif file (matrix) pdf
145FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-90-2.080e+020.00006050.021.41%77579.016.63%motif file (matrix) pdf
146Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-90-2.078e+020.00004834.017.11%59638.112.78%motif file (matrix) pdf
147Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-90-2.075e+020.00004029.014.26%48032.110.30%motif file (matrix) pdf
148c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-89-2.060e+020.00004851.017.17%59968.212.85%motif file (matrix) pdf
149PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-88-2.045e+020.00003358.011.88%38662.68.29%motif file (matrix) pdf
150BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-88-2.032e+020.00003504.012.40%40760.18.74%motif file (matrix) pdf
151Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-87-2.004e+020.00004099.014.51%49330.310.57%motif file (matrix) pdf
152bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-86-1.989e+020.00002769.09.80%30710.76.58%motif file (matrix) pdf
153HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer1e-86-1.986e+020.00005035.017.82%63008.613.51%motif file (matrix) pdf
154ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer1e-85-1.962e+020.00003408.012.06%39678.98.51%motif file (matrix) pdf
155Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-85-1.961e+020.00003520.012.46%41261.88.84%motif file (matrix) pdf
156Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-85-1.960e+020.00005139.018.19%64660.413.86%motif file (matrix) pdf
157ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer1e-85-1.958e+020.00005095.018.03%64024.313.72%motif file (matrix) pdf
158Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-82-1.908e+020.00004069.014.40%49310.710.57%motif file (matrix) pdf
159E-box/Arabidopsis-Promoters/Homer1e-82-1.905e+020.00003901.013.81%46911.110.06%motif file (matrix) pdf
160LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer1e-81-1.876e+020.00003937.013.93%47553.510.19%motif file (matrix) pdf
161FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer1e-81-1.870e+020.00004231.014.97%51819.711.11%motif file (matrix) pdf
162ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer1e-81-1.870e+020.00003476.012.30%41003.18.79%motif file (matrix) pdf
163ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer1e-81-1.866e+020.00006063.021.46%78901.516.91%motif file (matrix) pdf
164NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-80-1.851e+020.00003622.012.82%43151.49.25%motif file (matrix) pdf
165RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-79-1.835e+020.00005247.018.57%66879.914.34%motif file (matrix) pdf
166HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer1e-79-1.823e+020.00004852.017.17%61108.713.10%motif file (matrix) pdf
167FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-76-1.772e+020.00005334.018.88%68500.914.68%motif file (matrix) pdf
168ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer1e-76-1.766e+020.00004649.016.45%58403.112.52%motif file (matrix) pdf
169SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-76-1.764e+020.00002403.08.50%26474.55.67%motif file (matrix) pdf
170Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-76-1.754e+020.00002990.010.58%34617.77.42%motif file (matrix) pdf
171HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-75-1.743e+020.00003059.010.83%35625.47.64%motif file (matrix) pdf
172CHR(?)/Hela-CellCycle-Expression/Homer1e-74-1.727e+020.00003456.012.23%41307.58.85%motif file (matrix) pdf
173CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-73-1.696e+020.00003134.011.09%36868.27.90%motif file (matrix) pdf
174IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-73-1.692e+020.00002876.010.18%33258.17.13%motif file (matrix) pdf
175PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer1e-73-1.688e+020.00006622.023.44%88376.618.94%motif file (matrix) pdf
176Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer1e-73-1.686e+020.00002652.09.39%30167.86.47%motif file (matrix) pdf
177FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-73-1.685e+020.00005047.017.86%64690.713.87%motif file (matrix) pdf
178RLR1?/SacCer-Promoters/Homer1e-72-1.674e+020.00005053.017.88%64838.813.90%motif file (matrix) pdf
179Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-72-1.672e+020.00003110.011.01%36624.87.85%motif file (matrix) pdf
180USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-71-1.657e+020.00003677.013.01%44775.59.60%motif file (matrix) pdf
181p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-70-1.633e+020.00002380.08.42%26608.25.70%motif file (matrix) pdf
182NRF(NRF)/Promoter/Homer1e-70-1.625e+020.00002989.010.58%35108.47.53%motif file (matrix) pdf
183SeqBias: polyA-repeat1e-70-1.619e+020.000028165.099.68%460137.698.63%motif file (matrix) pdf
184TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-69-1.604e+020.00003182.011.26%37924.58.13%motif file (matrix) pdf
185HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-69-1.603e+020.00003178.011.25%37872.48.12%motif file (matrix) pdf
186Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer1e-69-1.597e+020.00003334.011.80%40121.98.60%motif file (matrix) pdf
187Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-68-1.577e+020.00002804.09.92%32698.77.01%motif file (matrix) pdf
188Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-67-1.564e+020.00002969.010.51%35076.27.52%motif file (matrix) pdf
189CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-67-1.554e+020.00003472.012.29%42291.59.07%motif file (matrix) pdf
190bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-66-1.536e+020.00002785.09.86%32597.56.99%motif file (matrix) pdf
191Unknown5/Drosophila-Promoters/Homer1e-66-1.523e+020.00003333.011.80%40435.08.67%motif file (matrix) pdf
192Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-65-1.498e+020.00002299.08.14%25978.15.57%motif file (matrix) pdf
193Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-64-1.486e+020.00003092.010.94%37149.07.96%motif file (matrix) pdf
194Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-64-1.485e+020.00003742.013.24%46518.19.97%motif file (matrix) pdf
195Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-64-1.479e+020.00003092.010.94%37181.27.97%motif file (matrix) pdf
196TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-63-1.471e+020.00002816.09.97%33295.87.14%motif file (matrix) pdf
197Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-62-1.436e+020.00004022.014.23%50851.410.90%motif file (matrix) pdf
198Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-61-1.426e+020.00002866.010.14%34194.47.33%motif file (matrix) pdf
199LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer1e-61-1.406e+020.00004687.016.59%60851.013.04%motif file (matrix) pdf
200NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-60-1.401e+020.00002844.010.07%33986.37.29%motif file (matrix) pdf
201Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-59-1.380e+020.00002529.08.95%29627.16.35%motif file (matrix) pdf
202NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-59-1.365e+020.00002793.09.88%33419.07.16%motif file (matrix) pdf
203FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-58-1.352e+020.00004119.014.58%52718.511.30%motif file (matrix) pdf
204HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer1e-57-1.327e+020.00002314.08.19%26828.15.75%motif file (matrix) pdf
205STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-57-1.318e+020.00002988.010.57%36410.87.80%motif file (matrix) pdf
206n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-57-1.318e+020.00005604.019.83%75183.316.12%motif file (matrix) pdf
207EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-56-1.310e+020.00001944.06.88%21782.14.67%motif file (matrix) pdf
208ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer1e-56-1.304e+020.00002205.07.80%25400.35.44%motif file (matrix) pdf
209caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer1e-56-1.304e+020.00003629.012.84%45766.99.81%motif file (matrix) pdf
210STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-56-1.291e+020.00003067.010.85%37670.88.07%motif file (matrix) pdf
211E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-55-1.277e+020.00003563.012.61%44940.59.63%motif file (matrix) pdf
212THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer1e-55-1.273e+020.00003163.011.19%39140.78.39%motif file (matrix) pdf
213PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-54-1.245e+020.00001693.05.99%18590.93.98%motif file (matrix) pdf
214PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-53-1.239e+020.00003013.010.66%37140.87.96%motif file (matrix) pdf
215Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer1e-52-1.218e+020.00002199.07.78%25658.95.50%motif file (matrix) pdf
216Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer1e-52-1.215e+020.00001949.06.90%22195.34.76%motif file (matrix) pdf
217HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer1e-52-1.211e+020.00002917.010.32%35889.27.69%motif file (matrix) pdf
218RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-52-1.207e+020.00002245.07.95%26343.55.65%motif file (matrix) pdf
219Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer1e-51-1.193e+020.00001783.06.31%19996.24.29%motif file (matrix) pdf
220Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-50-1.167e+020.00001488.05.27%16089.93.45%motif file (matrix) pdf
221FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer1e-50-1.157e+020.00002756.09.75%33826.47.25%motif file (matrix) pdf
222Unknown6/Drosophila-Promoters/Homer1e-49-1.148e+020.00004218.014.93%55344.911.86%motif file (matrix) pdf
223NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-49-1.143e+020.00005727.020.27%78226.416.77%motif file (matrix) pdf
224Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-49-1.142e+020.00001985.07.03%22974.64.92%motif file (matrix) pdf
225Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-49-1.141e+020.00002683.09.50%32854.37.04%motif file (matrix) pdf
226CRE(bZIP)/Promoter/Homer1e-49-1.139e+020.00002232.07.90%26444.85.67%motif file (matrix) pdf
227Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-49-1.133e+020.00002390.08.46%28704.26.15%motif file (matrix) pdf
228Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-48-1.128e+020.00001795.06.35%20400.74.37%motif file (matrix) pdf
229Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-48-1.117e+020.00001549.05.48%17078.73.66%motif file (matrix) pdf
230IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-48-1.115e+020.00001293.04.58%13659.82.93%motif file (matrix) pdf
231Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer1e-48-1.109e+020.00002266.08.02%27054.55.80%motif file (matrix) pdf
232Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer1e-48-1.108e+020.00001404.04.97%15158.73.25%motif file (matrix) pdf
233PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-47-1.093e+020.00002094.07.41%24696.45.29%motif file (matrix) pdf
234Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-47-1.093e+020.00002063.07.30%24263.85.20%motif file (matrix) pdf
235Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-46-1.059e+020.00004824.017.07%65034.313.94%motif file (matrix) pdf
236FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-45-1.047e+020.00002281.08.07%27538.45.90%motif file (matrix) pdf
237Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-45-1.043e+020.00002241.07.93%26989.35.79%motif file (matrix) pdf
238ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer1e-44-1.015e+020.00002897.010.25%36576.37.84%motif file (matrix) pdf
239EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-44-1.015e+020.00001978.07.00%23394.65.01%motif file (matrix) pdf
240Unknown3/Arabidopsis-Promoters/Homer1e-43-9.954e+010.00001619.05.73%18473.73.96%motif file (matrix) pdf
241Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-43-9.928e+010.00002055.07.27%24575.15.27%motif file (matrix) pdf
242GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer1e-42-9.871e+010.00002074.07.34%24869.45.33%motif file (matrix) pdf
243ABF1/SacCer-Promoters/Homer1e-42-9.829e+010.00001777.06.29%20712.14.44%motif file (matrix) pdf
244STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-42-9.685e+010.00002100.07.43%25321.85.43%motif file (matrix) pdf
245HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-41-9.560e+010.00002290.08.10%28091.06.02%motif file (matrix) pdf
246IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-40-9.311e+010.00001077.03.81%11368.42.44%motif file (matrix) pdf
247RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-40-9.248e+010.00001222.04.32%13319.22.85%motif file (matrix) pdf
248Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-39-9.177e+010.00001105.03.91%11781.02.53%motif file (matrix) pdf
249Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer1e-38-8.826e+010.00001803.06.38%21498.74.61%motif file (matrix) pdf
250CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer1e-37-8.730e+010.00001626.05.75%19054.44.08%motif file (matrix) pdf
251SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer1e-37-8.658e+010.00001781.06.30%21261.74.56%motif file (matrix) pdf
252Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer1e-37-8.559e+010.00002207.07.81%27388.05.87%motif file (matrix) pdf
253TATA-box/SacCer-Promoters/Homer1e-36-8.465e+010.00002119.07.50%26167.25.61%motif file (matrix) pdf
254ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer1e-36-8.400e+010.00001671.05.91%19824.24.25%motif file (matrix) pdf
255ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-36-8.392e+010.00001097.03.88%11927.42.56%motif file (matrix) pdf
256c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-36-8.379e+010.00001763.06.24%21130.24.53%motif file (matrix) pdf
257Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer1e-35-8.243e+010.00001525.05.40%17845.83.83%motif file (matrix) pdf
258ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer1e-34-8.057e+010.00001411.04.99%16335.83.50%motif file (matrix) pdf
259Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-34-8.010e+010.00001434.05.08%16673.83.57%motif file (matrix) pdf
260Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer1e-34-7.925e+010.00003044.010.77%40018.08.58%motif file (matrix) pdf
261Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-34-7.922e+010.00001276.04.52%14524.43.11%motif file (matrix) pdf
262Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-34-7.913e+010.00001497.05.30%17591.73.77%motif file (matrix) pdf
263STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-34-7.879e+010.00001773.06.27%21499.74.61%motif file (matrix) pdf
264HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-34-7.833e+010.00001394.04.93%16189.13.47%motif file (matrix) pdf
265Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-33-7.824e+010.00001230.04.35%13930.12.99%motif file (matrix) pdf
266E-box/Drosophila-Promoters/Homer1e-33-7.811e+010.00001506.05.33%17760.13.81%motif file (matrix) pdf
267ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer1e-33-7.780e+010.00001726.06.11%20877.94.48%motif file (matrix) pdf
268GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-33-7.717e+010.00001467.05.19%17254.23.70%motif file (matrix) pdf
269IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-33-7.603e+010.0000763.02.70%7766.81.66%motif file (matrix) pdf
270ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer1e-32-7.530e+010.00002989.010.58%39449.88.46%motif file (matrix) pdf
271E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-31-7.298e+010.00001801.06.37%22176.64.75%motif file (matrix) pdf
272Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-31-7.293e+010.00001440.05.10%17056.63.66%motif file (matrix) pdf
273PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer1e-31-7.198e+010.00001474.05.22%17575.33.77%motif file (matrix) pdf
274HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-31-7.162e+010.00001187.04.20%13591.72.91%motif file (matrix) pdf
275Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-30-7.010e+010.00001529.05.41%18436.73.95%motif file (matrix) pdf
276c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-29-6.745e+010.00003771.013.35%51788.311.10%motif file (matrix) pdf
277TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-29-6.720e+010.0000853.03.02%9216.41.98%motif file (matrix) pdf
278Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-29-6.681e+010.00001359.04.81%16184.33.47%motif file (matrix) pdf
279MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-28-6.608e+010.00001505.05.33%18282.83.92%motif file (matrix) pdf
280NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer1e-27-6.328e+010.00001194.04.23%14024.63.01%motif file (matrix) pdf
281NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-27-6.319e+010.0000970.03.43%10936.02.34%motif file (matrix) pdf
282PCF/Arabidopsis-Promoters/Homer1e-27-6.286e+010.00001106.03.91%12818.12.75%motif file (matrix) pdf
283Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer1e-27-6.230e+010.00001356.04.80%16345.03.50%motif file (matrix) pdf
284REB1/SacCer-Promoters/Homer1e-26-6.058e+010.00001264.04.47%15123.43.24%motif file (matrix) pdf
285Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-25-5.951e+010.00001255.04.44%15044.73.22%motif file (matrix) pdf
286Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-25-5.941e+010.00002522.08.93%33523.27.19%motif file (matrix) pdf
287Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-25-5.937e+010.00004678.016.56%66411.214.24%motif file (matrix) pdf
288GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer1e-25-5.888e+010.0000944.03.34%10741.92.30%motif file (matrix) pdf
289VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-25-5.818e+010.00001319.04.67%16011.23.43%motif file (matrix) pdf
290Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer1e-24-5.697e+010.0000952.03.37%10925.82.34%motif file (matrix) pdf
291ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer1e-24-5.590e+010.00001402.04.96%17305.73.71%motif file (matrix) pdf
292Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-23-5.524e+010.00001148.04.06%13728.52.94%motif file (matrix) pdf
293ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-23-5.489e+010.0000679.02.40%7300.91.56%motif file (matrix) pdf
294PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-23-5.415e+010.0000685.02.42%7404.41.59%motif file (matrix) pdf
295CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer1e-23-5.350e+010.00002058.07.28%27011.65.79%motif file (matrix) pdf
296TOD6?/SacCer-Promoters/Homer1e-22-5.244e+010.00001184.04.19%14365.43.08%motif file (matrix) pdf
297Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-21-4.953e+010.00001383.04.89%17361.83.72%motif file (matrix) pdf
298ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-21-4.940e+010.0000566.02.00%5979.71.28%motif file (matrix) pdf
299RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-20-4.780e+010.0000872.03.09%10188.62.18%motif file (matrix) pdf
300Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-20-4.725e+010.0000931.03.29%11035.02.37%motif file (matrix) pdf
301E-box(bHLH)/Promoter/Homer1e-20-4.718e+010.0000927.03.28%10981.22.35%motif file (matrix) pdf
302YY1(Zf)/Promoter/Homer1e-20-4.653e+010.00001104.03.91%13511.62.90%motif file (matrix) pdf
303Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer1e-19-4.599e+010.0000871.03.08%10250.62.20%motif file (matrix) pdf
304GFY(?)/Promoter/Homer1e-18-4.373e+010.0000839.02.97%9900.02.12%motif file (matrix) pdf
305Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-18-4.206e+010.0000884.03.13%10605.92.27%motif file (matrix) pdf
306p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer1e-18-4.197e+010.0000522.01.85%5633.71.21%motif file (matrix) pdf
307p53(p53)/Saos-p53-ChIP-Seq/Homer1e-18-4.197e+010.0000522.01.85%5633.71.21%motif file (matrix) pdf
308TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-18-4.160e+010.0000549.01.94%6006.31.29%motif file (matrix) pdf
309MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer1e-18-4.154e+010.00001027.03.63%12659.82.71%motif file (matrix) pdf
310X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-17-4.098e+010.0000793.02.81%9376.82.01%motif file (matrix) pdf
311NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-17-4.081e+010.0000474.01.68%5034.01.08%motif file (matrix) pdf
312PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-17-4.025e+010.0000895.03.17%10844.22.32%motif file (matrix) pdf
313PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer1e-17-4.002e+010.00001174.04.15%14855.63.18%motif file (matrix) pdf
314Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-17-3.980e+010.0000826.02.92%9891.42.12%motif file (matrix) pdf
315PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-17-3.946e+010.0000843.02.98%10146.72.17%motif file (matrix) pdf
316Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-16-3.905e+010.00001421.05.03%18521.13.97%motif file (matrix) pdf
317ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer1e-16-3.840e+010.0000694.02.46%8107.81.74%motif file (matrix) pdf
318ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer1e-16-3.820e+010.0000721.02.55%8491.71.82%motif file (matrix) pdf
319RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-16-3.808e+010.0000516.01.83%5684.21.22%motif file (matrix) pdf
320ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer1e-16-3.774e+010.0000560.01.98%6291.91.35%motif file (matrix) pdf
321Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-15-3.663e+010.00001227.04.34%15822.43.39%motif file (matrix) pdf
322Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-15-3.567e+010.0000820.02.90%9999.92.14%motif file (matrix) pdf
323PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer1e-15-3.514e+010.0000564.02.00%6444.11.38%motif file (matrix) pdf
324RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-15-3.462e+010.0000622.02.20%7266.01.56%motif file (matrix) pdf
325GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-14-3.427e+010.0000878.03.11%10896.82.34%motif file (matrix) pdf
326JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-14-3.371e+010.0000724.02.56%8733.41.87%motif file (matrix) pdf
327ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-14-3.313e+010.0000749.02.65%9114.91.95%motif file (matrix) pdf
328Unknown1/Arabidopsis-Promoters/Homer1e-13-3.162e+010.0000474.01.68%5348.41.15%motif file (matrix) pdf
329ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-13-3.146e+010.00001768.06.26%24240.25.20%motif file (matrix) pdf
330ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer1e-13-3.131e+010.0000844.02.99%10563.82.26%motif file (matrix) pdf
331E2F(E2F)/Hela-CellCycle-Expression/Homer1e-12-2.914e+010.0000761.02.69%9485.12.03%motif file (matrix) pdf
332DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer1e-12-2.766e+010.00001009.03.57%13178.32.82%motif file (matrix) pdf
333HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer1e-11-2.615e+010.0000431.01.53%4970.71.07%motif file (matrix) pdf
334OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-11-2.591e+010.0000716.02.53%9010.31.93%motif file (matrix) pdf
335GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-11-2.568e+010.0000542.01.92%6538.61.40%motif file (matrix) pdf
336GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-11-2.566e+010.0000648.02.29%8046.21.72%motif file (matrix) pdf
337Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-10-2.529e+010.0000555.01.96%6740.41.44%motif file (matrix) pdf
338Unknown4/Drosophila-Promoters/Homer1e-10-2.523e+010.0000501.01.77%5982.61.28%motif file (matrix) pdf
339GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer1e-10-2.517e+010.0000555.01.96%6746.91.45%motif file (matrix) pdf
340CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-10-2.480e+010.0000576.02.04%7062.31.51%motif file (matrix) pdf
341ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer1e-10-2.442e+010.0000389.01.38%4461.10.96%motif file (matrix) pdf
342FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-9-2.234e+010.0000479.01.70%5805.31.24%motif file (matrix) pdf
343Unknown3/Drosophila-Promoters/Homer1e-9-2.171e+010.0000726.02.57%9398.22.01%motif file (matrix) pdf
344TATA-box/Drosophila-Promoters/Homer1e-8-2.056e+010.0000368.01.30%4328.30.93%motif file (matrix) pdf
345Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-8-1.916e+010.0000562.01.99%7160.01.53%motif file (matrix) pdf
346GFX(?)/Promoter/Homer1e-8-1.903e+010.0000281.00.99%3190.80.68%motif file (matrix) pdf
347DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer1e-8-1.856e+010.0000840.02.97%11295.42.42%motif file (matrix) pdf
348GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-8-1.844e+010.0000304.01.08%3529.90.76%motif file (matrix) pdf
349NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-7-1.805e+010.0000340.01.20%4046.10.87%motif file (matrix) pdf
350GFY-Staf(?,Zf)/Promoter/Homer1e-7-1.787e+010.0000796.02.82%10689.32.29%motif file (matrix) pdf
351Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer1e-7-1.710e+010.0000315.01.11%3738.70.80%motif file (matrix) pdf
352Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-6-1.602e+010.0000307.01.09%3674.30.79%motif file (matrix) pdf
353Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-6-1.579e+010.0000306.01.08%3670.40.79%motif file (matrix) pdf
354T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer1e-6-1.492e+010.0000112.00.40%1086.00.23%motif file (matrix) pdf
355GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-6-1.487e+010.0000327.01.16%4010.70.86%motif file (matrix) pdf
356AARE(HLH)/mES-cMyc-ChIP-Seq/Homer1e-6-1.382e+010.0000327.01.16%4063.70.87%motif file (matrix) pdf
357LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer1e-5-1.363e+010.0000311.01.10%3844.40.82%motif file (matrix) pdf
358EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer1e-4-1.148e+010.0000216.00.76%2600.30.56%motif file (matrix) pdf
359NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-4-1.122e+010.0000236.00.84%2895.70.62%motif file (matrix) pdf
360SFP1/SacCer-Promoters/Homer1e-4-1.094e+010.0000383.01.36%5044.41.08%motif file (matrix) pdf
361Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-4-9.556e+000.000190.00.32%947.80.20%motif file (matrix) pdf
362Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-4-9.459e+000.0001317.01.12%4168.70.89%motif file (matrix) pdf
363Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer1e-3-8.848e+000.0002289.01.02%3795.50.81%motif file (matrix) pdf
364RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-3-7.141e+000.0008170.00.60%2158.80.46%motif file (matrix) pdf
365ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer1e-2-6.834e+000.001163.00.22%673.90.14%motif file (matrix) pdf
366EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer1e-2-6.382e+000.0018106.00.38%1280.60.27%motif file (matrix) pdf
367p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-2-5.590e+000.0039122.00.43%1547.60.33%motif file (matrix) pdf
368ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.349e+000.0050131.00.46%1691.60.36%motif file (matrix) pdf