Homer Known Motif Enrichment Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/ZF5/out/peak/idr/pseudo_reps/rep1/ZF5_rep1-pr.IDR0.05.HomerResults)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 31584, Total Background Sequences = 474754
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1SeqBias: GA-repeat1e-602-1.387e+030.000030419.096.31%416264.087.68%motif file (matrix) pdf
2GAGA-repeat/SacCer-Promoters/Homer1e-577-1.330e+030.000025791.081.66%325067.968.47%motif file (matrix) pdf
3Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-561-1.293e+030.000024453.077.42%302831.663.79%motif file (matrix) pdf
4AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-553-1.274e+030.000023503.074.41%287402.860.54%motif file (matrix) pdf
5SeqBias: CA-repeat1e-538-1.239e+030.000028674.090.79%381340.680.32%motif file (matrix) pdf
6Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-523-1.205e+030.000023854.075.53%295182.562.17%motif file (matrix) pdf
7Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer1e-516-1.189e+030.000019348.061.26%223915.147.16%motif file (matrix) pdf
8CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-501-1.154e+030.000016504.052.25%182676.038.48%motif file (matrix) pdf
9Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-490-1.130e+030.000019625.062.14%229815.348.41%motif file (matrix) pdf
10ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-456-1.051e+030.000014227.045.04%153125.132.25%motif file (matrix) pdf
11ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-447-1.030e+030.000013401.042.43%142256.829.96%motif file (matrix) pdf
12Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-439-1.013e+030.000020308.064.30%243870.851.37%motif file (matrix) pdf
13Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer1e-437-1.008e+030.000016129.051.07%181416.038.21%motif file (matrix) pdf
14Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-419-9.658e+020.000020778.065.79%252675.653.22%motif file (matrix) pdf
15Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-413-9.523e+020.000020408.064.61%247332.952.10%motif file (matrix) pdf
16KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-402-9.263e+020.000016420.051.99%188119.739.62%motif file (matrix) pdf
17Initiator/Drosophila-Promoters/Homer1e-395-9.095e+020.000016443.052.06%188980.839.80%motif file (matrix) pdf
18SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-392-9.047e+020.000025100.079.47%325127.668.48%motif file (matrix) pdf
19Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-390-8.995e+020.000014743.046.68%164802.934.71%motif file (matrix) pdf
20EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-390-8.993e+020.000012017.038.05%126923.026.73%motif file (matrix) pdf
21SUT1?/SacCer-Promoters/Homer1e-387-8.933e+020.000027794.088.00%373342.178.64%motif file (matrix) pdf
22Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-380-8.768e+020.000013730.043.47%151198.831.85%motif file (matrix) pdf
23Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-379-8.750e+020.000011975.037.91%127039.626.76%motif file (matrix) pdf
24Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-372-8.578e+020.000013946.044.16%154806.932.61%motif file (matrix) pdf
25KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-368-8.476e+020.000013114.041.52%143486.330.22%motif file (matrix) pdf
26ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-357-8.240e+020.000010769.034.10%112232.323.64%motif file (matrix) pdf
27IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer1e-348-8.017e+020.000014079.044.58%158438.633.37%motif file (matrix) pdf
28Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-341-7.867e+020.000013963.044.21%157279.733.13%motif file (matrix) pdf
29GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-341-7.864e+020.00009917.031.40%101977.221.48%motif file (matrix) pdf
30Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-341-7.858e+020.000012645.040.04%138870.929.25%motif file (matrix) pdf
31Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-341-7.853e+020.000017142.054.27%203344.942.83%motif file (matrix) pdf
32Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-339-7.818e+020.000016607.052.58%195565.141.19%motif file (matrix) pdf
33PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer1e-333-7.687e+020.000020870.066.08%260719.454.92%motif file (matrix) pdf
34Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-332-7.650e+020.000013920.044.07%157375.233.15%motif file (matrix) pdf
35Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)1e-330-7.613e+020.00009446.029.91%96481.420.32%motif file (matrix) pdf
36ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-326-7.508e+020.000013788.043.66%155973.632.85%motif file (matrix) pdf
37Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-318-7.325e+020.000016347.051.76%193458.640.75%motif file (matrix) pdf
38PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-316-7.287e+020.000011848.037.51%129668.927.31%motif file (matrix) pdf
39Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-312-7.204e+020.000012416.039.31%137767.829.02%motif file (matrix) pdf
40MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-312-7.200e+020.000014501.045.91%167145.435.21%motif file (matrix) pdf
41GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-302-6.976e+020.000010730.033.97%115410.024.31%motif file (matrix) pdf
42GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-302-6.958e+020.00009351.029.61%97071.620.45%motif file (matrix) pdf
43GAGA-repeat/Arabidopsis-Promoters/Homer1e-300-6.923e+020.000010235.032.41%108913.822.94%motif file (matrix) pdf
44Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-300-6.910e+020.000012659.040.08%142108.029.93%motif file (matrix) pdf
45PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-295-6.793e+020.000015822.050.09%187677.439.53%motif file (matrix) pdf
46Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-291-6.701e+020.000011619.036.79%128399.927.04%motif file (matrix) pdf
47Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-290-6.691e+020.000012340.039.07%138399.629.15%motif file (matrix) pdf
48NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-285-6.575e+020.000011846.037.51%131940.627.79%motif file (matrix) pdf
49Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-282-6.506e+020.000017983.056.94%220780.246.50%motif file (matrix) pdf
50Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-276-6.371e+020.000010815.034.24%118479.724.96%motif file (matrix) pdf
51Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer1e-275-6.340e+020.000014926.047.26%176323.837.14%motif file (matrix) pdf
52Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-274-6.323e+020.000012000.037.99%134923.628.42%motif file (matrix) pdf
53Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-270-6.228e+020.000011420.036.16%127233.826.80%motif file (matrix) pdf
54BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-267-6.154e+020.000012578.039.82%143572.930.24%motif file (matrix) pdf
55Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer1e-265-6.112e+020.000020376.064.51%258917.454.54%motif file (matrix) pdf
56SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-264-6.096e+020.00009269.029.35%98558.120.76%motif file (matrix) pdf
57HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer1e-262-6.041e+020.000014019.044.39%164393.034.63%motif file (matrix) pdf
58AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-260-5.991e+020.000012564.039.78%143960.030.32%motif file (matrix) pdf
59TATA-Box(TBP)/Promoter/Homer1e-259-5.964e+020.000011056.035.01%123128.125.93%motif file (matrix) pdf
60SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer1e-257-5.939e+020.00009975.031.58%108508.822.86%motif file (matrix) pdf
61ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-257-5.934e+020.00007676.024.30%78180.716.47%motif file (matrix) pdf
62RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-257-5.930e+020.00008365.026.48%87142.418.35%motif file (matrix) pdf
63ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer1e-257-5.924e+020.00008594.027.21%90161.718.99%motif file (matrix) pdf
64HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-246-5.684e+020.00009829.031.12%107379.922.62%motif file (matrix) pdf
65KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer1e-244-5.621e+020.00007281.023.05%73993.515.59%motif file (matrix) pdf
66ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-243-5.602e+020.00009624.030.47%104888.722.09%motif file (matrix) pdf
67RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer1e-242-5.585e+020.000013419.042.49%157552.133.19%motif file (matrix) pdf
68E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-242-5.573e+020.000011166.035.35%126007.026.54%motif file (matrix) pdf
69ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer1e-229-5.281e+020.00009953.031.51%110429.623.26%motif file (matrix) pdf
70Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-228-5.261e+020.00006657.021.08%67040.014.12%motif file (matrix) pdf
71Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-224-5.181e+020.00007317.023.17%75748.215.95%motif file (matrix) pdf
72Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-224-5.172e+020.000015754.049.88%192996.040.65%motif file (matrix) pdf
73EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer1e-222-5.120e+020.000010754.034.05%121967.125.69%motif file (matrix) pdf
74EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-218-5.033e+020.00006648.021.05%67578.414.23%motif file (matrix) pdf
75Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-217-5.018e+020.00007436.023.54%77791.616.39%motif file (matrix) pdf
76MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-217-5.008e+020.00007894.024.99%83812.017.65%motif file (matrix) pdf
77Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-216-4.985e+020.000011004.034.84%125924.126.52%motif file (matrix) pdf
78ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-210-4.840e+020.00006926.021.93%71724.415.11%motif file (matrix) pdf
79Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer1e-208-4.806e+020.00007307.023.14%76772.416.17%motif file (matrix) pdf
80AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-208-4.796e+020.00009083.028.76%100361.821.14%motif file (matrix) pdf
81Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-206-4.746e+020.00007468.023.64%79065.616.65%motif file (matrix) pdf
82Unknown2/Drosophila-Promoters/Homer1e-204-4.704e+020.00008978.028.43%99272.020.91%motif file (matrix) pdf
83Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-204-4.703e+020.00008600.027.23%94198.519.84%motif file (matrix) pdf
84Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-202-4.667e+020.000011600.036.73%135463.128.53%motif file (matrix) pdf
85EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-202-4.666e+020.00006185.019.58%62740.513.21%motif file (matrix) pdf
86Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-202-4.663e+020.00007802.024.70%83728.517.64%motif file (matrix) pdf
87PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-202-4.662e+020.00007094.022.46%74453.515.68%motif file (matrix) pdf
88SeqBias: TA-repeat1e-202-4.657e+020.000018750.059.37%240086.150.57%motif file (matrix) pdf
89Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-200-4.620e+020.00007943.025.15%85737.218.06%motif file (matrix) pdf
90Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-199-4.583e+020.00008983.028.44%99773.921.02%motif file (matrix) pdf
91PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-198-4.578e+020.00005347.016.93%52434.811.04%motif file (matrix) pdf
92Unknown4/Arabidopsis-Promoters/Homer1e-197-4.557e+020.00008125.025.73%88364.718.61%motif file (matrix) pdf
93NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer1e-196-4.535e+020.00008204.025.98%89493.418.85%motif file (matrix) pdf
94SeqBias: A/T bias1e-195-4.500e+020.000029625.093.80%421384.088.76%motif file (matrix) pdf
95HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer1e-193-4.457e+020.00008366.026.49%91931.619.36%motif file (matrix) pdf
96STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-192-4.439e+020.00007567.023.96%81375.617.14%motif file (matrix) pdf
97KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer1e-191-4.410e+020.00008551.027.07%94578.619.92%motif file (matrix) pdf
98SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer1e-188-4.346e+020.00008217.026.02%90331.419.03%motif file (matrix) pdf
99NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-187-4.323e+020.00006937.021.96%73495.215.48%motif file (matrix) pdf
100E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-183-4.232e+020.000010998.034.82%128817.327.13%motif file (matrix) pdf
101Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-181-4.173e+020.00007881.024.95%86464.118.21%motif file (matrix) pdf
102Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-180-4.153e+020.00008183.025.91%90572.819.08%motif file (matrix) pdf
103Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-179-4.132e+020.000013502.042.75%164782.534.71%motif file (matrix) pdf
104Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-177-4.079e+020.00007361.023.31%79890.716.83%motif file (matrix) pdf
105Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer1e-176-4.062e+020.00006851.021.69%73238.115.43%motif file (matrix) pdf
106NFY(CCAAT)/Promoter/Homer1e-172-3.971e+020.00006267.019.84%65936.113.89%motif file (matrix) pdf
107SeqBias: CG-repeat1e-172-3.963e+020.000012902.040.85%156929.033.05%motif file (matrix) pdf
108BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-171-3.941e+020.000012710.040.24%154280.232.50%motif file (matrix) pdf
109AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-171-3.939e+020.00007022.022.23%75906.215.99%motif file (matrix) pdf
110MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-171-3.938e+020.00006167.019.53%64749.013.64%motif file (matrix) pdf
111PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer1e-170-3.931e+020.000014510.045.94%180324.237.98%motif file (matrix) pdf
112Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-168-3.881e+020.00004976.015.75%49747.110.48%motif file (matrix) pdf
113LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer1e-167-3.862e+020.00007064.022.37%76728.516.16%motif file (matrix) pdf
114AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-167-3.859e+020.00005360.016.97%54655.111.51%motif file (matrix) pdf
115Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-163-3.763e+020.00006669.021.12%71877.415.14%motif file (matrix) pdf
116Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer1e-163-3.759e+020.00005703.018.06%59345.312.50%motif file (matrix) pdf
117Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-160-3.703e+020.00007996.025.32%89746.218.90%motif file (matrix) pdf
118BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-159-3.680e+020.00004923.015.59%49670.010.46%motif file (matrix) pdf
119PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-157-3.631e+020.00004928.015.60%49879.110.51%motif file (matrix) pdf
120Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-153-3.534e+020.00005237.016.58%54096.911.39%motif file (matrix) pdf
121TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-153-3.530e+020.00005847.018.51%61954.713.05%motif file (matrix) pdf
122Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-153-3.527e+020.00006503.020.59%70528.214.86%motif file (matrix) pdf
123MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-151-3.495e+020.00007090.022.45%78408.516.52%motif file (matrix) pdf
124Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-150-3.465e+020.00004754.015.05%48182.110.15%motif file (matrix) pdf
125FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-150-3.457e+020.000010027.031.75%118605.724.98%motif file (matrix) pdf
126Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-148-3.426e+020.00006078.019.24%65313.313.76%motif file (matrix) pdf
127Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-146-3.370e+020.00004249.013.45%42141.78.88%motif file (matrix) pdf
128ETS(ETS)/Promoter/Homer1e-145-3.348e+020.00004668.014.78%47455.010.00%motif file (matrix) pdf
129bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-144-3.326e+020.00004386.013.89%43977.69.26%motif file (matrix) pdf
130EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-144-3.325e+020.00008396.026.58%96692.720.37%motif file (matrix) pdf
131Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-143-3.304e+020.00005312.016.82%55800.911.75%motif file (matrix) pdf
132Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-143-3.296e+020.00006268.019.85%68269.114.38%motif file (matrix) pdf
133Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-142-3.293e+020.00004894.015.50%50489.810.63%motif file (matrix) pdf
134HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer1e-140-3.234e+020.00008583.027.18%99638.720.99%motif file (matrix) pdf
135RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-140-3.228e+020.00008822.027.93%102946.321.68%motif file (matrix) pdf
136CHR(?)/Hela-CellCycle-Expression/Homer1e-139-3.218e+020.00005752.018.21%61791.313.02%motif file (matrix) pdf
137Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-138-3.194e+020.00004223.013.37%42329.58.92%motif file (matrix) pdf
138Tal11e-138-3.186e+020.00009885.031.30%117860.724.82%motif file (matrix) pdf
139Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-138-3.182e+020.00005062.016.03%52993.811.16%motif file (matrix) pdf
140CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-137-3.171e+020.00005191.016.44%54688.711.52%motif file (matrix) pdf
141RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-136-3.146e+020.00006119.019.37%66857.114.08%motif file (matrix) pdf
142Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-133-3.073e+020.00004442.014.06%45449.79.57%motif file (matrix) pdf
143Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-132-3.054e+020.00004189.013.26%42323.08.91%motif file (matrix) pdf
144Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-131-3.038e+020.00005267.016.68%56122.411.82%motif file (matrix) pdf
145Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-130-3.010e+020.00006263.019.83%69272.114.59%motif file (matrix) pdf
146MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-130-3.001e+020.00006058.019.18%66598.014.03%motif file (matrix) pdf
147FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-129-2.989e+020.00008827.027.95%104084.521.92%motif file (matrix) pdf
148Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-129-2.979e+020.00003312.010.49%31703.06.68%motif file (matrix) pdf
149HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer1e-127-2.929e+020.00005724.018.12%62471.013.16%motif file (matrix) pdf
150Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-127-2.925e+020.00006570.020.80%73688.515.52%motif file (matrix) pdf
151NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-126-2.904e+020.00004065.012.87%41224.98.68%motif file (matrix) pdf
152IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-126-2.903e+020.00003988.012.63%40262.28.48%motif file (matrix) pdf
153Unknown5/Drosophila-Promoters/Homer1e-124-2.875e+020.00004521.014.31%47089.49.92%motif file (matrix) pdf
154RLR1?/SacCer-Promoters/Homer1e-124-2.872e+020.00008376.026.52%98403.020.73%motif file (matrix) pdf
155Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-123-2.846e+020.00005772.018.28%63416.813.36%motif file (matrix) pdf
156E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-123-2.835e+020.00005725.018.13%62838.813.24%motif file (matrix) pdf
157Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer1e-122-2.816e+020.00004119.013.04%42179.88.88%motif file (matrix) pdf
158Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-122-2.815e+020.00007439.023.55%85854.518.08%motif file (matrix) pdf
159Sp1(Zf)/Promoter/Homer1e-121-2.800e+020.00004786.015.15%50738.510.69%motif file (matrix) pdf
160Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-120-2.777e+020.00004620.014.63%48682.010.25%motif file (matrix) pdf
161FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-118-2.734e+020.00008614.027.27%102330.721.55%motif file (matrix) pdf
162Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-118-2.732e+020.00003997.012.66%40907.58.62%motif file (matrix) pdf
163CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-118-2.730e+020.00004745.015.02%50451.410.63%motif file (matrix) pdf
164DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer1e-115-2.670e+020.00008010.025.36%94305.819.86%motif file (matrix) pdf
165CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-113-2.609e+020.00004435.014.04%46886.09.88%motif file (matrix) pdf
166LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer1e-113-2.606e+020.00008417.026.65%100218.921.11%motif file (matrix) pdf
167Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-112-2.595e+020.00004987.015.79%54074.611.39%motif file (matrix) pdf
168Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-111-2.573e+020.00004429.014.02%46932.99.89%motif file (matrix) pdf
169HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer1e-110-2.542e+020.00004897.015.50%53100.311.18%motif file (matrix) pdf
170Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-109-2.511e+020.00007451.023.59%87387.018.41%motif file (matrix) pdf
171Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer1e-108-2.506e+020.00003431.010.86%34515.77.27%motif file (matrix) pdf
172TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-108-2.503e+020.00004487.014.21%47925.710.09%motif file (matrix) pdf
173Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-108-2.501e+020.00003680.011.65%37646.07.93%motif file (matrix) pdf
174FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-107-2.485e+020.00007267.023.01%84996.617.90%motif file (matrix) pdf
175caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer1e-107-2.469e+020.00006321.020.01%72252.915.22%motif file (matrix) pdf
176SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-107-2.464e+020.00002898.09.18%28066.05.91%motif file (matrix) pdf
177SeqBias: CG bias1e-106-2.455e+020.000029861.094.54%432838.091.17%motif file (matrix) pdf
178RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-106-2.451e+020.00007318.023.17%85852.118.08%motif file (matrix) pdf
179Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer1e-106-2.449e+020.00003813.012.07%39492.68.32%motif file (matrix) pdf
180TATA-box/SacCer-Promoters/Homer1e-105-2.423e+020.00004649.014.72%50318.010.60%motif file (matrix) pdf
181STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-105-2.418e+020.00004389.013.90%46966.49.89%motif file (matrix) pdf
182Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-104-2.414e+020.00006767.021.43%78520.916.54%motif file (matrix) pdf
183c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-103-2.372e+020.00004414.013.98%47456.810.00%motif file (matrix) pdf
184ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer1e-101-2.336e+020.00003790.012.00%39578.98.34%motif file (matrix) pdf
185PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-101-2.333e+020.00002325.07.36%21519.64.53%motif file (matrix) pdf
186ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer1e-100-2.317e+020.00004498.014.24%48748.210.27%motif file (matrix) pdf
187STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-100-2.305e+020.00004368.013.83%47109.29.92%motif file (matrix) pdf
188PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer1e-99-2.302e+020.00009114.028.86%111477.723.48%motif file (matrix) pdf
189Unknown6/Drosophila-Promoters/Homer1e-98-2.275e+020.00008326.026.36%100617.221.19%motif file (matrix) pdf
190TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-98-2.274e+020.00003649.011.55%37997.28.00%motif file (matrix) pdf
191Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-97-2.242e+020.00003363.010.65%34492.47.27%motif file (matrix) pdf
192PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-97-2.237e+020.00003215.010.18%32651.46.88%motif file (matrix) pdf
193E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-96-2.211e+020.00005133.016.25%57498.512.11%motif file (matrix) pdf
194Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-95-2.194e+020.00003522.011.15%36655.97.72%motif file (matrix) pdf
195ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer1e-95-2.192e+020.00003836.012.15%40662.98.56%motif file (matrix) pdf
196FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-92-2.124e+020.00003693.011.69%39074.08.23%motif file (matrix) pdf
197ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer1e-90-2.085e+020.00006847.021.68%81179.517.10%motif file (matrix) pdf
198ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer1e-90-2.082e+020.00003114.09.86%31882.16.72%motif file (matrix) pdf
199E-box/Arabidopsis-Promoters/Homer1e-90-2.081e+020.00003702.011.72%39343.28.29%motif file (matrix) pdf
200Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-89-2.069e+020.00002597.08.22%25508.75.37%motif file (matrix) pdf
201Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-88-2.040e+020.00002584.08.18%25434.65.36%motif file (matrix) pdf
202HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-88-2.038e+020.00003554.011.25%37600.57.92%motif file (matrix) pdf
203Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-88-2.030e+020.00002643.08.37%26190.05.52%motif file (matrix) pdf
204USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-86-1.995e+020.00003710.011.75%39756.48.37%motif file (matrix) pdf
205RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-84-1.938e+020.00006509.020.61%77292.416.28%motif file (matrix) pdf
206FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer1e-84-1.937e+020.00003440.010.89%36505.57.69%motif file (matrix) pdf
207SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer1e-83-1.912e+020.00002917.09.24%29962.76.31%motif file (matrix) pdf
208Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-80-1.847e+020.00003019.09.56%31463.76.63%motif file (matrix) pdf
209Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-77-1.793e+020.00002426.07.68%24227.15.10%motif file (matrix) pdf
210p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-77-1.780e+020.00002563.08.11%25964.95.47%motif file (matrix) pdf
211Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer1e-75-1.739e+020.00002546.08.06%25885.35.45%motif file (matrix) pdf
212IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-74-1.726e+020.00001806.05.72%16896.03.56%motif file (matrix) pdf
213Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer1e-74-1.725e+020.00003855.012.21%42687.58.99%motif file (matrix) pdf
214HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-74-1.708e+020.00003121.09.88%33256.07.00%motif file (matrix) pdf
215GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer1e-73-1.696e+020.00002753.08.72%28620.46.03%motif file (matrix) pdf
216HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-73-1.689e+020.00003674.011.63%40471.08.52%motif file (matrix) pdf
217ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer1e-72-1.673e+020.00002091.06.62%20473.24.31%motif file (matrix) pdf
218PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer1e-72-1.671e+020.00002574.08.15%26453.65.57%motif file (matrix) pdf
219ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer1e-71-1.649e+020.00005280.016.72%62020.613.06%motif file (matrix) pdf
220c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-71-1.648e+020.00002150.06.81%21270.64.48%motif file (matrix) pdf
221CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer1e-71-1.645e+020.00004437.014.05%50719.910.68%motif file (matrix) pdf
222Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-70-1.634e+020.00004031.012.76%45386.79.56%motif file (matrix) pdf
223EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-70-1.630e+020.00001869.05.92%17906.43.77%motif file (matrix) pdf
224PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer1e-70-1.621e+020.00007742.024.51%96131.020.25%motif file (matrix) pdf
225Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer1e-69-1.598e+020.00005798.018.36%69335.014.60%motif file (matrix) pdf
226Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-68-1.574e+020.00002002.06.34%19676.84.14%motif file (matrix) pdf
227Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-67-1.565e+020.00002635.08.34%27583.45.81%motif file (matrix) pdf
228Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer1e-67-1.556e+020.00001922.06.09%18755.83.95%motif file (matrix) pdf
229STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-66-1.536e+020.00002862.09.06%30575.26.44%motif file (matrix) pdf
230FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer1e-66-1.530e+020.00002817.08.92%30024.86.32%motif file (matrix) pdf
231bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-66-1.529e+020.00002619.08.29%27507.45.79%motif file (matrix) pdf
232NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-64-1.491e+020.00002632.08.33%27806.25.86%motif file (matrix) pdf
233RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-64-1.475e+020.00002338.07.40%24151.15.09%motif file (matrix) pdf
234RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-62-1.447e+020.00001508.04.77%14079.72.97%motif file (matrix) pdf
235PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-62-1.447e+020.00002507.07.94%26381.15.56%motif file (matrix) pdf
236DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer1e-62-1.446e+020.00002100.06.65%21277.44.48%motif file (matrix) pdf
237IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-62-1.434e+020.00001431.04.53%13201.52.78%motif file (matrix) pdf
238Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer1e-61-1.422e+020.00002237.07.08%23065.74.86%motif file (matrix) pdf
239Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-61-1.411e+020.00001899.06.01%18903.53.98%motif file (matrix) pdf
240Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-60-1.404e+020.00002251.07.13%23300.84.91%motif file (matrix) pdf
241CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer1e-60-1.403e+020.00002207.06.99%22751.64.79%motif file (matrix) pdf
242Unknown3/Arabidopsis-Promoters/Homer1e-60-1.382e+020.00001767.05.59%17375.13.66%motif file (matrix) pdf
243STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-59-1.373e+020.00002483.07.86%26343.15.55%motif file (matrix) pdf
244PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-59-1.373e+020.00001527.04.83%14502.13.05%motif file (matrix) pdf
245NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-59-1.370e+020.00002220.07.03%23028.84.85%motif file (matrix) pdf
246Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer1e-58-1.357e+020.00001743.05.52%17156.13.61%motif file (matrix) pdf
247NRF(NRF)/Promoter/Homer1e-58-1.342e+020.00002387.07.56%25235.05.32%motif file (matrix) pdf
248PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-57-1.331e+020.00003159.010.00%35239.87.42%motif file (matrix) pdf
249Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer1e-57-1.318e+020.00001901.06.02%19218.64.05%motif file (matrix) pdf
250SeqBias: polyA-repeat1e-55-1.282e+020.000031538.099.85%470932.599.19%motif file (matrix) pdf
251E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-55-1.275e+020.00002794.08.85%30720.56.47%motif file (matrix) pdf
252Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-54-1.266e+020.00001473.04.66%14148.12.98%motif file (matrix) pdf
253IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-54-1.254e+020.00001281.04.06%11890.62.50%motif file (matrix) pdf
254CRE(bZIP)/Promoter/Homer1e-52-1.198e+020.00002051.06.49%21498.84.53%motif file (matrix) pdf
255Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-51-1.197e+020.00002047.06.48%21453.44.52%motif file (matrix) pdf
256MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer1e-50-1.165e+020.00001930.06.11%20093.44.23%motif file (matrix) pdf
257DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer1e-49-1.134e+020.00001710.05.41%17449.83.68%motif file (matrix) pdf
258EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-48-1.109e+020.00001877.05.94%19622.14.13%motif file (matrix) pdf
259REB1/SacCer-Promoters/Homer1e-47-1.099e+020.00001461.04.63%14487.53.05%motif file (matrix) pdf
260E-box/Drosophila-Promoters/Homer1e-47-1.091e+020.00001782.05.64%18492.33.90%motif file (matrix) pdf
261Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer1e-47-1.086e+020.00001698.05.38%17459.13.68%motif file (matrix) pdf
262Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-46-1.074e+020.00005527.017.50%68682.814.47%motif file (matrix) pdf
263Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-46-1.061e+020.00001908.06.04%20187.94.25%motif file (matrix) pdf
264ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer1e-45-1.053e+020.00002347.07.43%25844.85.44%motif file (matrix) pdf
265Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-45-1.044e+020.00003021.09.56%34730.87.32%motif file (matrix) pdf
266HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-45-1.038e+020.00001773.05.61%18565.53.91%motif file (matrix) pdf
267Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-44-1.029e+020.00001771.05.61%18573.23.91%motif file (matrix) pdf
268THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer1e-44-1.023e+020.00003102.09.82%35912.07.56%motif file (matrix) pdf
269ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer1e-44-1.020e+020.00001850.05.86%19603.94.13%motif file (matrix) pdf
270NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-43-1.008e+020.00001426.04.51%14341.23.02%motif file (matrix) pdf
271PCF/Arabidopsis-Promoters/Homer1e-43-9.981e+010.00001546.04.89%15860.33.34%motif file (matrix) pdf
272HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer1e-43-9.974e+010.00002109.06.68%23001.24.84%motif file (matrix) pdf
273Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer1e-43-9.950e+010.00001713.05.42%17963.53.78%motif file (matrix) pdf
274Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-42-9.896e+010.00001621.05.13%16826.93.54%motif file (matrix) pdf
275ABF1/SacCer-Promoters/Homer1e-42-9.888e+010.00001676.05.31%17519.93.69%motif file (matrix) pdf
276Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-42-9.731e+010.00001321.04.18%13161.12.77%motif file (matrix) pdf
277Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-41-9.463e+010.00001625.05.15%17029.63.59%motif file (matrix) pdf
278Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-40-9.220e+010.00002765.08.75%31930.36.73%motif file (matrix) pdf
279NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer1e-39-8.989e+010.00001094.03.46%10622.62.24%motif file (matrix) pdf
280ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-38-8.829e+010.00001025.03.25%9837.22.07%motif file (matrix) pdf
281VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-38-8.818e+010.00001494.04.73%15612.43.29%motif file (matrix) pdf
282RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-38-8.799e+010.0000742.02.35%6523.41.37%motif file (matrix) pdf
283Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-37-8.695e+010.00001444.04.57%15028.73.17%motif file (matrix) pdf
284TOD6?/SacCer-Promoters/Homer1e-37-8.677e+010.00001278.04.05%12967.42.73%motif file (matrix) pdf
285Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer1e-37-8.631e+010.00001368.04.33%14100.42.97%motif file (matrix) pdf
286n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-35-8.273e+010.00005797.018.35%74217.415.63%motif file (matrix) pdf
287Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-35-8.191e+010.00001347.04.26%13990.02.95%motif file (matrix) pdf
288Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-35-8.173e+010.00002016.06.38%22562.64.75%motif file (matrix) pdf
289Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-33-7.773e+010.00001419.04.49%15048.23.17%motif file (matrix) pdf
290MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-33-7.757e+010.00001764.05.59%19471.24.10%motif file (matrix) pdf
291Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer1e-33-7.721e+010.00001464.04.64%15638.23.29%motif file (matrix) pdf
292ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-33-7.691e+010.0000806.02.55%7538.31.59%motif file (matrix) pdf
293E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-33-7.680e+010.00001440.04.56%15349.23.23%motif file (matrix) pdf
294OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-32-7.407e+010.00001556.04.93%16937.23.57%motif file (matrix) pdf
295Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-31-7.271e+010.00001123.03.56%11514.22.43%motif file (matrix) pdf
296NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-31-7.218e+010.0000581.01.84%5042.41.06%motif file (matrix) pdf
297RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-31-7.209e+010.0000868.02.75%8411.11.77%motif file (matrix) pdf
298TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-30-7.002e+010.0000885.02.80%8677.81.83%motif file (matrix) pdf
299NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-30-6.986e+010.00006189.019.60%80826.817.02%motif file (matrix) pdf
300GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer1e-30-6.984e+010.0000896.02.84%8816.41.86%motif file (matrix) pdf
301Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer1e-30-6.972e+010.0000942.02.98%9381.01.98%motif file (matrix) pdf
302ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-30-6.931e+010.0000767.02.43%7279.51.53%motif file (matrix) pdf
303Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-30-6.909e+010.00001234.03.91%13032.12.74%motif file (matrix) pdf
304Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-28-6.550e+010.0000899.02.85%8986.21.89%motif file (matrix) pdf
305GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-27-6.394e+010.0000961.03.04%9800.12.06%motif file (matrix) pdf
306PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-27-6.374e+010.0000708.02.24%6729.41.42%motif file (matrix) pdf
307RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-26-6.094e+010.0000834.02.64%8334.91.76%motif file (matrix) pdf
308PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer1e-26-6.084e+010.00001779.05.63%20437.94.30%motif file (matrix) pdf
309Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-26-6.081e+010.00001274.04.03%13863.82.92%motif file (matrix) pdf
310HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-26-6.072e+010.00001213.03.84%13087.12.76%motif file (matrix) pdf
311PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-26-6.002e+010.0000880.02.79%8929.91.88%motif file (matrix) pdf
312ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer1e-25-5.941e+010.00001177.03.73%12680.92.67%motif file (matrix) pdf
313X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-25-5.897e+010.0000881.02.79%8976.91.89%motif file (matrix) pdf
314JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-25-5.833e+010.0000795.02.52%7940.01.67%motif file (matrix) pdf
315ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer1e-25-5.768e+010.0000669.02.12%6432.81.35%motif file (matrix) pdf
316CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-24-5.750e+010.00001004.03.18%10562.32.22%motif file (matrix) pdf
317E-box(bHLH)/Promoter/Homer1e-24-5.605e+010.0000825.02.61%8381.51.77%motif file (matrix) pdf
318Unknown4/Drosophila-Promoters/Homer1e-24-5.587e+010.00001069.03.38%11445.22.41%motif file (matrix) pdf
319HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer1e-24-5.534e+010.0000682.02.16%6656.31.40%motif file (matrix) pdf
320ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer1e-23-5.323e+010.00001092.03.46%11843.42.49%motif file (matrix) pdf
321GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-22-5.272e+010.00001707.05.40%19901.34.19%motif file (matrix) pdf
322GFY(?)/Promoter/Homer1e-22-5.246e+010.0000831.02.63%8577.91.81%motif file (matrix) pdf
323Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-22-5.209e+010.0000953.03.02%10121.32.13%motif file (matrix) pdf
324GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-21-5.056e+010.0000870.02.75%9132.71.92%motif file (matrix) pdf
325ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer1e-21-5.049e+010.00003185.010.08%40185.08.46%motif file (matrix) pdf
326TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-21-5.030e+010.0000742.02.35%7547.81.59%motif file (matrix) pdf
327Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-21-4.963e+010.00002992.09.47%37574.37.91%motif file (matrix) pdf
328PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer1e-20-4.785e+010.0000668.02.11%6716.11.41%motif file (matrix) pdf
329Unknown1/Arabidopsis-Promoters/Homer1e-19-4.532e+010.0000688.02.18%7046.91.48%motif file (matrix) pdf
330TATA-box/Drosophila-Promoters/Homer1e-19-4.402e+010.0000622.01.97%6275.41.32%motif file (matrix) pdf
331ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer1e-19-4.399e+010.0000689.02.18%7104.61.50%motif file (matrix) pdf
332p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer1e-19-4.389e+010.0000622.01.97%6279.01.32%motif file (matrix) pdf
333p53(p53)/Saos-p53-ChIP-Seq/Homer1e-19-4.389e+010.0000622.01.97%6279.01.32%motif file (matrix) pdf
334Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer1e-18-4.355e+010.0000516.01.63%5000.41.05%motif file (matrix) pdf
335ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer1e-17-4.006e+010.00001065.03.37%12073.32.54%motif file (matrix) pdf
336AARE(HLH)/mES-cMyc-ChIP-Seq/Homer1e-17-3.941e+010.0000534.01.69%5344.11.13%motif file (matrix) pdf
337ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer1e-16-3.886e+010.0000632.02.00%6574.71.38%motif file (matrix) pdf
338GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-16-3.791e+010.0000519.01.64%5208.81.10%motif file (matrix) pdf
339Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-16-3.715e+010.00004484.014.20%59699.112.57%motif file (matrix) pdf
340ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer1e-15-3.665e+010.0000619.01.96%6491.31.37%motif file (matrix) pdf
341c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-15-3.566e+010.00004087.012.94%54200.211.42%motif file (matrix) pdf
342GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-15-3.563e+010.0000635.02.01%6730.11.42%motif file (matrix) pdf
343ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-14-3.348e+010.0000593.01.88%6282.21.32%motif file (matrix) pdf
344E2F(E2F)/Hela-CellCycle-Expression/Homer1e-12-2.820e+010.0000620.01.96%6839.11.44%motif file (matrix) pdf
345Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-11-2.703e+010.0000428.01.36%4449.90.94%motif file (matrix) pdf
346SFP1/SacCer-Promoters/Homer1e-11-2.689e+010.0000908.02.87%10680.62.25%motif file (matrix) pdf
347GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-11-2.549e+010.00001003.03.18%12033.52.53%motif file (matrix) pdf
348FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-11-2.538e+010.0000843.02.67%9899.52.09%motif file (matrix) pdf
349YY1(Zf)/Promoter/Homer1e-11-2.534e+010.0000910.02.88%10795.52.27%motif file (matrix) pdf
350GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer1e-10-2.431e+010.0000460.01.46%4954.31.04%motif file (matrix) pdf
351Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-9-2.245e+010.0000715.02.26%8360.91.76%motif file (matrix) pdf
352T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer1e-9-2.227e+010.0000177.00.56%1562.80.33%motif file (matrix) pdf
353Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer1e-9-2.177e+010.0000616.01.95%7088.91.49%motif file (matrix) pdf
354NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-9-2.171e+010.0000423.01.34%4588.80.97%motif file (matrix) pdf
355EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer1e-9-2.109e+010.0000217.00.69%2058.30.43%motif file (matrix) pdf
356LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer1e-7-1.816e+010.0000350.01.11%3802.20.80%motif file (matrix) pdf
357ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-7-1.767e+010.00002133.06.75%28397.55.98%motif file (matrix) pdf
358Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-6-1.587e+010.0000196.00.62%1957.50.41%motif file (matrix) pdf
359Unknown3/Drosophila-Promoters/Homer1e-6-1.569e+010.0000680.02.15%8295.81.75%motif file (matrix) pdf
360SeqBias: polyC-repeat1e-5-1.353e+010.000031582.099.99%474477.799.94%motif file (matrix) pdf
361GFX(?)/Promoter/Homer1e-5-1.329e+010.0000216.00.68%2294.00.48%motif file (matrix) pdf
362Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-5-1.281e+010.0000355.01.12%4112.60.87%motif file (matrix) pdf
363p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-5-1.271e+010.0000131.00.41%1264.60.27%motif file (matrix) pdf
364Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-5-1.255e+010.0000286.00.91%3221.90.68%motif file (matrix) pdf
365NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-5-1.211e+010.0000333.01.05%3858.80.81%motif file (matrix) pdf
366ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer1e-4-1.130e+010.0000170.00.54%1788.60.38%motif file (matrix) pdf
367ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer1e-4-1.099e+010.000063.00.20%517.90.11%motif file (matrix) pdf
368ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer1e-4-1.019e+010.0000184.00.58%2008.10.42%motif file (matrix) pdf
369RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-4-9.925e+000.0001174.00.55%1891.50.40%motif file (matrix) pdf
370GFY-Staf(?,Zf)/Promoter/Homer1e-4-9.481e+000.0001815.02.58%10659.02.25%motif file (matrix) pdf
371EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer1e-4-9.283e+000.0001116.00.37%1185.10.25%motif file (matrix) pdf
372DREF/Drosophila-Promoters/Homer1e-2-6.795e+000.001283.00.26%859.00.18%motif file (matrix) pdf