Homer Known Motif Enrichment Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/ZF4/out/peak/idr/pseudo_reps/rep1/ZF4_rep1-pr.IDR0.05.HomerResults)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 30729, Total Background Sequences = 478877
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1SeqBias: GA-repeat1e-420-9.675e+020.000029306.095.37%421172.487.95%motif file (matrix) pdf
2SeqBias: CA-repeat1e-376-8.679e+020.000027451.089.33%384632.880.32%motif file (matrix) pdf
3GAGA-repeat/SacCer-Promoters/Homer1e-368-8.491e+020.000024222.078.82%325514.467.97%motif file (matrix) pdf
4Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-327-7.549e+020.000022618.073.60%301111.362.88%motif file (matrix) pdf
5AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-324-7.480e+020.000022187.072.20%294095.461.41%motif file (matrix) pdf
6Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-322-7.416e+020.000022169.072.14%294027.261.40%motif file (matrix) pdf
7Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-306-7.063e+020.000018499.060.20%235655.749.21%motif file (matrix) pdf
8Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer1e-296-6.819e+020.000017745.057.74%224732.446.93%motif file (matrix) pdf
9ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-294-6.783e+020.000013352.043.45%158275.533.05%motif file (matrix) pdf
10ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-292-6.726e+020.000012616.041.05%147726.730.85%motif file (matrix) pdf
11SUT1?/SacCer-Promoters/Homer1e-283-6.526e+020.000027337.088.96%388975.281.22%motif file (matrix) pdf
12Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-274-6.322e+020.000019759.064.30%258632.954.01%motif file (matrix) pdf
13Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer1e-272-6.266e+020.000014884.048.43%182966.738.21%motif file (matrix) pdf
14CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-266-6.146e+020.000014690.047.80%180510.837.69%motif file (matrix) pdf
15SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-258-5.954e+020.000024121.078.49%332811.369.50%motif file (matrix) pdf
16KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-254-5.858e+020.000015899.051.74%199978.941.76%motif file (matrix) pdf
17Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-249-5.748e+020.000018986.061.78%248603.851.91%motif file (matrix) pdf
18Initiator/Drosophila-Promoters/Homer1e-241-5.560e+020.000015096.049.12%188972.439.46%motif file (matrix) pdf
19EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-240-5.539e+020.000011087.036.08%129911.627.13%motif file (matrix) pdf
20Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-239-5.507e+020.000011221.036.51%131956.527.55%motif file (matrix) pdf
21Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-230-5.316e+020.000013167.042.85%161082.433.64%motif file (matrix) pdf
22KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-229-5.276e+020.000012593.040.98%152783.631.90%motif file (matrix) pdf
23Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-226-5.222e+020.000018713.060.89%246517.351.48%motif file (matrix) pdf
24Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-226-5.213e+020.000013298.043.27%163443.534.13%motif file (matrix) pdf
25PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer1e-221-5.095e+020.000019222.062.55%255188.853.29%motif file (matrix) pdf
26Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-216-4.993e+020.000012638.041.13%154588.532.28%motif file (matrix) pdf
27ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-212-4.903e+020.000013309.043.31%164894.434.43%motif file (matrix) pdf
28Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-212-4.888e+020.000013400.043.61%166311.634.73%motif file (matrix) pdf
29ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-210-4.850e+020.00009954.032.39%116321.924.29%motif file (matrix) pdf
30Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-206-4.760e+020.000011772.038.31%142853.729.83%motif file (matrix) pdf
31Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)1e-205-4.733e+020.00008757.028.50%99910.220.86%motif file (matrix) pdf
32NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-204-4.711e+020.000011384.037.05%137405.528.69%motif file (matrix) pdf
33GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-203-4.682e+020.00009198.029.93%106273.022.19%motif file (matrix) pdf
34Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-202-4.663e+020.000012479.040.61%153627.732.08%motif file (matrix) pdf
35Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-201-4.643e+020.000011759.038.27%143145.329.89%motif file (matrix) pdf
36Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-201-4.641e+020.000012079.039.31%147840.830.87%motif file (matrix) pdf
37PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-198-4.569e+020.000010911.035.51%131136.827.38%motif file (matrix) pdf
38Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-197-4.541e+020.000015735.051.20%203143.942.42%motif file (matrix) pdf
39IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer1e-194-4.468e+020.000013119.042.69%163951.234.24%motif file (matrix) pdf
40Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-191-4.416e+020.000014578.047.44%186090.238.86%motif file (matrix) pdf
41GAGA-repeat/Arabidopsis-Promoters/Homer1e-190-4.381e+020.00009572.031.15%112707.623.54%motif file (matrix) pdf
42GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-173-3.987e+020.00009354.030.44%111197.423.22%motif file (matrix) pdf
43PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-173-3.986e+020.000014603.047.52%188499.539.36%motif file (matrix) pdf
44Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-171-3.945e+020.000015014.048.86%194954.340.71%motif file (matrix) pdf
45Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-168-3.869e+020.000010400.033.84%126709.926.46%motif file (matrix) pdf
46ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-167-3.860e+020.00007092.023.08%80057.016.72%motif file (matrix) pdf
47SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-164-3.785e+020.00008627.028.07%101724.821.24%motif file (matrix) pdf
48MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-163-3.775e+020.000013134.042.74%167383.534.95%motif file (matrix) pdf
49ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-160-3.703e+020.00009296.030.25%111563.123.30%motif file (matrix) pdf
50Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-155-3.585e+020.000017069.055.55%228507.847.72%motif file (matrix) pdf
51HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-152-3.522e+020.00009110.029.65%109690.522.91%motif file (matrix) pdf
52Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-151-3.494e+020.000010959.035.66%136552.228.51%motif file (matrix) pdf
53Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer1e-151-3.493e+020.000019354.062.98%265086.655.35%motif file (matrix) pdf
54BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-151-3.482e+020.000011413.037.14%143270.929.92%motif file (matrix) pdf
55HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer1e-150-3.455e+020.000013375.043.52%172590.736.04%motif file (matrix) pdf
56ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer1e-149-3.445e+020.00009522.030.99%115934.024.21%motif file (matrix) pdf
57Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-149-3.442e+020.00009792.031.86%119838.825.02%motif file (matrix) pdf
58Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer1e-149-3.439e+020.000013807.044.93%179185.137.42%motif file (matrix) pdf
59E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-145-3.340e+020.000010658.034.68%132885.727.75%motif file (matrix) pdf
60ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer1e-143-3.297e+020.00008093.026.34%96229.420.09%motif file (matrix) pdf
61KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer1e-142-3.289e+020.00006764.022.01%77707.316.23%motif file (matrix) pdf
62PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-142-3.270e+020.00005045.016.42%54484.011.38%motif file (matrix) pdf
63GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-141-3.252e+020.00007926.025.79%94067.719.64%motif file (matrix) pdf
64Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-139-3.219e+020.000010250.033.36%127521.626.63%motif file (matrix) pdf
65Unknown2/Drosophila-Promoters/Homer1e-138-3.199e+020.00008524.027.74%102765.621.46%motif file (matrix) pdf
66RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-138-3.187e+020.00007748.025.21%91837.819.18%motif file (matrix) pdf
67TATA-Box(TBP)/Promoter/Homer1e-137-3.162e+020.00009658.031.43%119207.424.89%motif file (matrix) pdf
68SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer1e-135-3.121e+020.00008718.028.37%105886.622.11%motif file (matrix) pdf
69AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-134-3.108e+020.000011364.036.98%144408.030.15%motif file (matrix) pdf
70MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-134-3.086e+020.00007462.024.28%88254.618.43%motif file (matrix) pdf
71EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-132-3.045e+020.00006007.019.55%68260.814.25%motif file (matrix) pdf
72SeqBias: A/T bias1e-131-3.019e+020.000028500.092.74%423557.588.45%motif file (matrix) pdf
73AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-130-3.009e+020.00008753.028.48%106905.922.32%motif file (matrix) pdf
74Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-129-2.983e+020.00007088.023.07%83458.317.43%motif file (matrix) pdf
75Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-129-2.979e+020.000011169.036.35%142197.429.69%motif file (matrix) pdf
76Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-128-2.958e+020.00009933.032.32%124191.725.93%motif file (matrix) pdf
77EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer1e-126-2.915e+020.00009274.030.18%114852.623.98%motif file (matrix) pdf
78SeqBias: TA-repeat1e-125-2.894e+020.000016606.054.04%225134.647.01%motif file (matrix) pdf
79Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-124-2.872e+020.000014930.048.58%199378.241.63%motif file (matrix) pdf
80EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-124-2.871e+020.00005718.018.61%64989.413.57%motif file (matrix) pdf
81Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-123-2.853e+020.000010233.033.30%129101.826.96%motif file (matrix) pdf
82ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-121-2.800e+020.00006432.020.93%75100.215.68%motif file (matrix) pdf
83Unknown4/Arabidopsis-Promoters/Homer1e-121-2.792e+020.00007493.024.38%89989.718.79%motif file (matrix) pdf
84Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer1e-121-2.787e+020.00006809.022.16%80402.816.79%motif file (matrix) pdf
85Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-119-2.762e+020.00006298.020.49%73401.315.33%motif file (matrix) pdf
86Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-119-2.751e+020.00006863.022.33%81315.016.98%motif file (matrix) pdf
87RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer1e-117-2.700e+020.000012033.039.16%156536.232.69%motif file (matrix) pdf
88Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-116-2.682e+020.00006921.022.52%82434.617.21%motif file (matrix) pdf
89PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-114-2.635e+020.00006592.021.45%78036.516.30%motif file (matrix) pdf
90Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-114-2.635e+020.00007246.023.58%87220.918.21%motif file (matrix) pdf
91Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-113-2.618e+020.00005689.018.51%65601.213.70%motif file (matrix) pdf
92NFY(CCAAT)/Promoter/Homer1e-113-2.607e+020.00005789.018.84%67024.614.00%motif file (matrix) pdf
93SeqBias: CG-repeat1e-112-2.593e+020.000012568.040.90%165165.134.49%motif file (matrix) pdf
94Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-111-2.571e+020.00008371.027.24%103553.921.62%motif file (matrix) pdf
95KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer1e-111-2.570e+020.00007314.023.80%88486.118.48%motif file (matrix) pdf
96HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer1e-111-2.568e+020.00007197.023.42%86842.818.13%motif file (matrix) pdf
97MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-110-2.553e+020.00005860.019.07%68227.014.25%motif file (matrix) pdf
98E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-110-2.541e+020.000010549.034.33%135413.928.28%motif file (matrix) pdf
99STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-109-2.511e+020.00006751.021.97%80821.716.88%motif file (matrix) pdf
100NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer1e-107-2.467e+020.00007519.024.47%91889.419.19%motif file (matrix) pdf
101NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-98-2.277e+020.00006047.019.68%72040.215.04%motif file (matrix) pdf
102Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-98-2.267e+020.00007560.024.60%93475.319.52%motif file (matrix) pdf
103Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-98-2.259e+020.00006976.022.70%85201.717.79%motif file (matrix) pdf
104EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-97-2.253e+020.00008249.026.84%103444.521.60%motif file (matrix) pdf
105Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-96-2.216e+020.000012486.040.63%166228.734.71%motif file (matrix) pdf
106Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer1e-96-2.215e+020.00005796.018.86%68826.914.37%motif file (matrix) pdf
107AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-95-2.188e+020.00006657.021.66%81038.516.92%motif file (matrix) pdf
108Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-94-2.176e+020.00005657.018.41%67072.114.01%motif file (matrix) pdf
109Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-94-2.174e+020.00004176.013.59%46811.79.78%motif file (matrix) pdf
110Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-93-2.149e+020.00006851.022.29%83977.817.54%motif file (matrix) pdf
111SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer1e-91-2.105e+020.00007365.023.97%91532.919.11%motif file (matrix) pdf
112NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-90-2.086e+020.00003882.012.63%43208.19.02%motif file (matrix) pdf
113PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-90-2.073e+020.00004329.014.09%49278.310.29%motif file (matrix) pdf
114PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer1e-89-2.072e+020.000012560.040.87%168276.335.14%motif file (matrix) pdf
115Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-89-2.067e+020.00005679.018.48%67882.414.18%motif file (matrix) pdf
116TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-89-2.055e+020.00005297.017.24%62625.013.08%motif file (matrix) pdf
117SeqBias: CG bias1e-88-2.049e+020.000029427.095.76%445177.592.96%motif file (matrix) pdf
118Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer1e-88-2.044e+020.00005230.017.02%61750.712.89%motif file (matrix) pdf
119Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-88-2.041e+020.00004993.016.25%58489.612.21%motif file (matrix) pdf
120Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-87-2.023e+020.00007266.023.64%90555.918.91%motif file (matrix) pdf
121Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-87-2.021e+020.00004947.016.10%57943.012.10%motif file (matrix) pdf
122Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-87-2.010e+020.00006831.022.23%84411.017.63%motif file (matrix) pdf
123Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-86-1.995e+020.00006841.022.26%84631.417.67%motif file (matrix) pdf
124LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer1e-85-1.972e+020.00005876.019.12%71098.714.85%motif file (matrix) pdf
125BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-85-1.963e+020.000011622.037.82%154879.832.34%motif file (matrix) pdf
126Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-85-1.958e+020.00005754.018.72%69455.314.50%motif file (matrix) pdf
127Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-83-1.934e+020.00004001.013.02%45404.49.48%motif file (matrix) pdf
128FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-83-1.925e+020.00008652.028.15%111152.923.21%motif file (matrix) pdf
129CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-83-1.916e+020.00004559.014.84%53075.111.08%motif file (matrix) pdf
130Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-82-1.901e+020.00004661.015.17%54543.411.39%motif file (matrix) pdf
131Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-81-1.877e+020.00005481.017.84%66030.613.79%motif file (matrix) pdf
132Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-81-1.870e+020.00003033.09.87%32752.96.84%motif file (matrix) pdf
133ETS(ETS)/Promoter/Homer1e-80-1.857e+020.00004287.013.95%49611.710.36%motif file (matrix) pdf
134bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-80-1.853e+020.00003712.012.08%41837.58.74%motif file (matrix) pdf
135HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer1e-80-1.850e+020.00007288.023.72%91828.219.18%motif file (matrix) pdf
136Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-79-1.830e+020.00005356.017.43%64511.513.47%motif file (matrix) pdf
137Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-79-1.820e+020.00003664.011.92%41324.58.63%motif file (matrix) pdf
138AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-78-1.818e+020.00004637.015.09%54584.811.40%motif file (matrix) pdf
139Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-78-1.797e+020.00006565.021.36%81762.417.07%motif file (matrix) pdf
140IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-75-1.735e+020.00003523.011.46%39769.98.30%motif file (matrix) pdf
141RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-75-1.729e+020.00005555.018.08%67810.814.16%motif file (matrix) pdf
142Tal11e-74-1.717e+020.00009116.029.66%119256.524.90%motif file (matrix) pdf
143Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-73-1.698e+020.00003370.010.97%37865.17.91%motif file (matrix) pdf
144E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-73-1.694e+020.00005378.017.50%65501.313.68%motif file (matrix) pdf
145CHR(?)/Hela-CellCycle-Expression/Homer1e-72-1.661e+020.00004810.015.65%57727.412.05%motif file (matrix) pdf
146BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-71-1.654e+020.00004190.013.63%49184.410.27%motif file (matrix) pdf
147Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-71-1.644e+020.00004202.013.67%49393.410.31%motif file (matrix) pdf
148FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-71-1.635e+020.00007610.024.76%97756.920.41%motif file (matrix) pdf
149RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-70-1.634e+020.00007978.025.96%103114.421.53%motif file (matrix) pdf
150Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-70-1.632e+020.00005527.017.99%67924.214.18%motif file (matrix) pdf
151Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-70-1.631e+020.00005956.019.38%74006.715.45%motif file (matrix) pdf
152HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer1e-70-1.620e+020.00005214.016.97%63581.013.28%motif file (matrix) pdf
153SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-69-1.608e+020.00002648.08.62%28635.45.98%motif file (matrix) pdf
154MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-69-1.604e+020.00006360.020.70%79920.216.69%motif file (matrix) pdf
155Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-69-1.597e+020.00004047.013.17%47483.09.92%motif file (matrix) pdf
156CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-68-1.577e+020.00004084.013.29%48081.910.04%motif file (matrix) pdf
157Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-67-1.555e+020.00004253.013.84%50513.910.55%motif file (matrix) pdf
158FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-63-1.464e+020.00007359.023.95%95195.819.88%motif file (matrix) pdf
159PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-63-1.458e+020.00002067.06.73%21613.84.51%motif file (matrix) pdf
160MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-62-1.430e+020.00005480.017.83%68378.114.28%motif file (matrix) pdf
161Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer1e-61-1.417e+020.00003480.011.32%40546.08.47%motif file (matrix) pdf
162Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-61-1.412e+020.00004342.014.13%52457.910.95%motif file (matrix) pdf
163Unknown5/Drosophila-Promoters/Homer1e-61-1.411e+020.00003915.012.74%46538.49.72%motif file (matrix) pdf
164Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-60-1.391e+020.00003567.011.61%41850.68.74%motif file (matrix) pdf
165Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer1e-60-1.384e+020.00002841.09.25%32047.36.69%motif file (matrix) pdf
166Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-59-1.380e+020.00006243.020.32%79584.616.62%motif file (matrix) pdf
167FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-59-1.371e+020.00006155.020.03%78374.816.37%motif file (matrix) pdf
168Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-59-1.366e+020.00003008.09.79%34365.27.18%motif file (matrix) pdf
169ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer1e-59-1.363e+020.00003493.011.37%40966.88.55%motif file (matrix) pdf
170LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer1e-59-1.360e+020.00007099.023.10%92097.919.23%motif file (matrix) pdf
171Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-58-1.358e+020.00003189.010.38%36849.57.69%motif file (matrix) pdf
172Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-57-1.331e+020.00004418.014.38%53940.511.26%motif file (matrix) pdf
173PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-57-1.330e+020.00002981.09.70%34155.07.13%motif file (matrix) pdf
174ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer1e-56-1.309e+020.00003559.011.58%42130.78.80%motif file (matrix) pdf
175DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer1e-56-1.298e+020.00007402.024.09%96941.120.24%motif file (matrix) pdf
176Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-55-1.288e+020.00003999.013.01%48318.510.09%motif file (matrix) pdf
177RLR1?/SacCer-Promoters/Homer1e-55-1.285e+020.00007055.022.96%91963.919.20%motif file (matrix) pdf
178HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer1e-55-1.280e+020.00004111.013.38%49923.510.42%motif file (matrix) pdf
179FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer1e-55-1.273e+020.00003215.010.46%37588.57.85%motif file (matrix) pdf
180Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-54-1.256e+020.00003011.09.80%34889.87.29%motif file (matrix) pdf
181E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-54-1.249e+020.00004800.015.62%59773.012.48%motif file (matrix) pdf
182IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-53-1.237e+020.00001617.05.26%16578.93.46%motif file (matrix) pdf
183Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer1e-53-1.231e+020.00003684.011.99%44238.09.24%motif file (matrix) pdf
184GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer1e-53-1.226e+020.00002552.08.30%28828.26.02%motif file (matrix) pdf
185Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-53-1.226e+020.00002217.07.21%24381.95.09%motif file (matrix) pdf
186Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-52-1.217e+020.00003886.012.65%47116.09.84%motif file (matrix) pdf
187CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-52-1.216e+020.00003987.012.97%48528.710.13%motif file (matrix) pdf
188Sp1(Zf)/Promoter/Homer1e-52-1.200e+020.00004341.014.13%53580.511.19%motif file (matrix) pdf
189TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-51-1.195e+020.00003867.012.58%46968.79.81%motif file (matrix) pdf
190STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-51-1.190e+020.00003803.012.38%46105.89.63%motif file (matrix) pdf
191HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-51-1.185e+020.00002930.09.53%34108.27.12%motif file (matrix) pdf
192ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer1e-51-1.179e+020.00002036.06.63%22181.54.63%motif file (matrix) pdf
193ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer1e-50-1.159e+020.00004163.013.55%51306.910.71%motif file (matrix) pdf
194Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer1e-50-1.157e+020.00002428.07.90%27458.75.73%motif file (matrix) pdf
195IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-50-1.157e+020.00001323.04.31%13124.72.74%motif file (matrix) pdf
196RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-50-1.153e+020.00006557.021.34%85629.917.88%motif file (matrix) pdf
197c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-49-1.149e+020.00004030.013.11%49495.510.34%motif file (matrix) pdf
198EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-49-1.145e+020.00001817.05.91%19447.84.06%motif file (matrix) pdf
199p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-49-1.145e+020.00002385.07.76%26934.65.62%motif file (matrix) pdf
200TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-49-1.138e+020.00003207.010.44%38119.67.96%motif file (matrix) pdf
201STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-49-1.138e+020.00003762.012.24%45809.59.57%motif file (matrix) pdf
202Unknown6/Drosophila-Promoters/Homer1e-48-1.123e+020.00006863.022.33%90305.818.86%motif file (matrix) pdf
203HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-48-1.106e+020.00003237.010.53%38694.68.08%motif file (matrix) pdf
204TATA-box/SacCer-Promoters/Homer1e-47-1.104e+020.00003661.011.91%44586.89.31%motif file (matrix) pdf
205Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-47-1.092e+020.00002116.06.89%23570.44.92%motif file (matrix) pdf
206Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-46-1.082e+020.00002857.09.30%33593.47.01%motif file (matrix) pdf
207E-box/Arabidopsis-Promoters/Homer1e-46-1.082e+020.00003407.011.09%41170.28.60%motif file (matrix) pdf
208ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer1e-46-1.080e+020.00006347.020.65%83097.117.35%motif file (matrix) pdf
209caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer1e-46-1.078e+020.00005221.016.99%66829.313.96%motif file (matrix) pdf
210USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-46-1.066e+020.00003414.011.11%41350.58.63%motif file (matrix) pdf
211FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-44-1.036e+020.00003086.010.04%36964.47.72%motif file (matrix) pdf
212ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer1e-43-1.013e+020.00002530.08.23%29466.96.15%motif file (matrix) pdf
213ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer1e-42-9.846e+010.00004929.016.04%63261.113.21%motif file (matrix) pdf
214Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-42-9.817e+010.00002160.07.03%24611.75.14%motif file (matrix) pdf
215RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-42-9.804e+010.00005909.019.23%77449.116.17%motif file (matrix) pdf
216Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-42-9.783e+010.00002252.07.33%25862.05.40%motif file (matrix) pdf
217PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-42-9.748e+010.00003020.09.83%36369.27.59%motif file (matrix) pdf
218NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-41-9.563e+010.00002541.08.27%29881.66.24%motif file (matrix) pdf
219STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-41-9.533e+010.00002566.08.35%30237.06.31%motif file (matrix) pdf
220SeqBias: polyA-repeat1e-41-9.455e+010.000030670.099.80%475175.299.22%motif file (matrix) pdf
221HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-41-9.451e+010.00003126.010.17%37997.87.93%motif file (matrix) pdf
222PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-40-9.432e+010.00002325.07.57%27006.05.64%motif file (matrix) pdf
223Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-40-9.384e+010.00003374.010.98%41492.68.66%motif file (matrix) pdf
224c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-40-9.352e+010.00001917.06.24%21561.24.50%motif file (matrix) pdf
225FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer1e-40-9.314e+010.00002669.08.69%31755.36.63%motif file (matrix) pdf
226Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer1e-39-9.116e+010.00003231.010.51%39645.38.28%motif file (matrix) pdf
227Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer1e-39-9.033e+010.00001748.05.69%19449.24.06%motif file (matrix) pdf
228Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-38-8.918e+010.00001815.05.91%20384.14.26%motif file (matrix) pdf
229PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer1e-38-8.804e+010.00002142.06.97%24818.45.18%motif file (matrix) pdf
230RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-38-8.774e+010.00002198.07.15%25590.15.34%motif file (matrix) pdf
231PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer1e-37-8.581e+010.00008187.026.64%112021.123.39%motif file (matrix) pdf
232CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer1e-37-8.556e+010.00003597.011.71%45119.49.42%motif file (matrix) pdf
233Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-36-8.392e+010.00001840.05.99%20939.44.37%motif file (matrix) pdf
234bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-35-8.068e+010.00002402.07.82%28721.36.00%motif file (matrix) pdf
235STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-34-7.988e+010.00002196.07.15%25939.05.42%motif file (matrix) pdf
236Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-34-7.978e+010.00002088.06.79%24473.65.11%motif file (matrix) pdf
237CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer1e-33-7.760e+010.00001943.06.32%22609.34.72%motif file (matrix) pdf
238ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer1e-33-7.718e+010.00002252.07.33%26841.55.60%motif file (matrix) pdf
239SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer1e-33-7.708e+010.00002383.07.75%28647.95.98%motif file (matrix) pdf
240Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-33-7.650e+010.00001686.05.49%19200.84.01%motif file (matrix) pdf
241NRF(NRF)/Promoter/Homer1e-33-7.604e+010.00002183.07.10%25953.65.42%motif file (matrix) pdf
242NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-32-7.490e+010.00001999.06.51%23498.04.91%motif file (matrix) pdf
243HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer1e-32-7.466e+010.00002005.06.52%23591.44.93%motif file (matrix) pdf
244Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer1e-31-7.315e+010.00001780.05.79%20613.94.30%motif file (matrix) pdf
245Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer1e-30-7.086e+010.00004774.015.54%63037.413.16%motif file (matrix) pdf
246E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-30-7.055e+010.00002588.08.42%31853.06.65%motif file (matrix) pdf
247RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-30-6.966e+010.00001316.04.28%14573.33.04%motif file (matrix) pdf
248Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-29-6.824e+010.00001530.04.98%17474.93.65%motif file (matrix) pdf
249Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-29-6.824e+010.00002314.07.53%28174.05.88%motif file (matrix) pdf
250Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-29-6.762e+010.00002480.08.07%30516.56.37%motif file (matrix) pdf
251IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer1e-29-6.726e+010.00001045.03.40%11131.52.32%motif file (matrix) pdf
252Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-28-6.643e+010.00001544.05.02%17742.83.71%motif file (matrix) pdf
253Unknown3/Arabidopsis-Promoters/Homer1e-28-6.641e+010.00001548.05.04%17797.63.72%motif file (matrix) pdf
254Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-28-6.637e+010.00001390.04.52%15687.23.28%motif file (matrix) pdf
255THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer1e-28-6.611e+010.00002996.09.75%37860.37.91%motif file (matrix) pdf
256Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer1e-27-6.440e+010.00001977.06.43%23729.24.96%motif file (matrix) pdf
257Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer1e-27-6.383e+010.00001538.05.00%17780.63.71%motif file (matrix) pdf
258ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-26-6.173e+010.0000735.02.39%7375.11.54%motif file (matrix) pdf
259E-box/Drosophila-Promoters/Homer1e-26-6.170e+010.00001624.05.28%19043.23.98%motif file (matrix) pdf
260Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer1e-26-6.129e+010.00001419.04.62%16296.13.40%motif file (matrix) pdf
261ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer1e-26-6.009e+010.00001736.05.65%20649.84.31%motif file (matrix) pdf
262Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer1e-26-6.007e+010.00001398.04.55%16070.03.36%motif file (matrix) pdf
263ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-26-6.006e+010.0000980.03.19%10549.72.20%motif file (matrix) pdf
264REB1/SacCer-Promoters/Homer1e-25-5.841e+010.00001298.04.22%14805.03.09%motif file (matrix) pdf
265EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-25-5.820e+010.00001762.05.73%21103.44.41%motif file (matrix) pdf
266DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer1e-25-5.800e+010.00001663.05.41%19758.54.13%motif file (matrix) pdf
267NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-24-5.736e+010.00001231.04.01%13956.62.91%motif file (matrix) pdf
268CRE(bZIP)/Promoter/Homer1e-24-5.647e+010.00001837.05.98%22228.14.64%motif file (matrix) pdf
269PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer1e-24-5.646e+010.00006964.022.66%96669.820.19%motif file (matrix) pdf
270PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-24-5.544e+010.00001210.03.94%13759.42.87%motif file (matrix) pdf
271Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-23-5.489e+010.00001492.04.86%17584.63.67%motif file (matrix) pdf
272Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-23-5.390e+010.00001199.03.90%13680.52.86%motif file (matrix) pdf
273TOD6?/SacCer-Promoters/Homer1e-22-5.283e+010.00001173.03.82%13380.32.79%motif file (matrix) pdf
274PCF/Arabidopsis-Promoters/Homer1e-22-5.280e+010.00001347.04.38%15720.73.28%motif file (matrix) pdf
275Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer1e-22-5.249e+010.00001283.04.18%14871.73.11%motif file (matrix) pdf
276NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer1e-22-5.219e+010.00001031.03.36%11521.12.41%motif file (matrix) pdf
277Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-22-5.212e+010.00001638.05.33%19724.24.12%motif file (matrix) pdf
278DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer1e-22-5.174e+010.00001393.04.53%16395.83.42%motif file (matrix) pdf
279Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-22-5.093e+010.00004696.015.28%63628.513.29%motif file (matrix) pdf
280HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-21-5.052e+010.00001555.05.06%18670.83.90%motif file (matrix) pdf
281Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-21-5.050e+010.00001822.05.93%22359.94.67%motif file (matrix) pdf
282ABF1/SacCer-Promoters/Homer1e-21-5.039e+010.00001502.04.89%17950.73.75%motif file (matrix) pdf
283Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer1e-21-5.004e+010.00001573.05.12%18943.13.96%motif file (matrix) pdf
284PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer1e-21-4.997e+010.0000661.02.15%6810.01.42%motif file (matrix) pdf
285VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-20-4.812e+010.00001373.04.47%16305.83.40%motif file (matrix) pdf
286MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer1e-20-4.720e+010.00001541.05.01%18658.33.90%motif file (matrix) pdf
287GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer1e-20-4.655e+010.0000864.02.81%9550.21.99%motif file (matrix) pdf
288ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer1e-20-4.618e+010.00001160.03.77%13510.02.82%motif file (matrix) pdf
289NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-19-4.544e+010.0000527.01.71%5268.41.10%motif file (matrix) pdf
290X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-19-4.524e+010.0000838.02.73%9261.11.93%motif file (matrix) pdf
291Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-19-4.520e+010.00001181.03.84%13841.62.89%motif file (matrix) pdf
292ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-19-4.414e+010.0000709.02.31%7622.91.59%motif file (matrix) pdf
293Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-19-4.399e+010.0000845.02.75%9404.01.96%motif file (matrix) pdf
294RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-19-4.376e+010.0000796.02.59%8769.91.83%motif file (matrix) pdf
295Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer1e-18-4.317e+010.0000886.02.88%9979.92.08%motif file (matrix) pdf
296p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer1e-18-4.227e+010.0000603.01.96%6326.81.32%motif file (matrix) pdf
297p53(p53)/Saos-p53-ChIP-Seq/Homer1e-18-4.227e+010.0000603.01.96%6326.81.32%motif file (matrix) pdf
298Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-18-4.222e+010.00001131.03.68%13310.92.78%motif file (matrix) pdf
299Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-17-4.086e+010.00001274.04.15%15333.63.20%motif file (matrix) pdf
300ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer1e-17-4.071e+010.00001088.03.54%12802.52.67%motif file (matrix) pdf
301TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-17-3.986e+010.0000680.02.21%7405.71.55%motif file (matrix) pdf
302HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-17-3.921e+010.00001143.03.72%13627.32.85%motif file (matrix) pdf
303Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-16-3.905e+010.00002166.07.05%27960.25.84%motif file (matrix) pdf
304PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-16-3.851e+010.0000654.02.13%7118.21.49%motif file (matrix) pdf
305ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer1e-16-3.773e+010.0000612.01.99%6602.01.38%motif file (matrix) pdf
306Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-16-3.736e+010.00001070.03.48%12727.42.66%motif file (matrix) pdf
307OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-15-3.641e+010.00001238.04.03%15085.73.15%motif file (matrix) pdf
308GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-15-3.613e+010.00001581.05.14%19883.54.15%motif file (matrix) pdf
309Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer1e-15-3.519e+010.0000919.02.99%10785.32.25%motif file (matrix) pdf
310RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-15-3.469e+010.0000746.02.43%8485.41.77%motif file (matrix) pdf
311RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-14-3.379e+010.0000608.01.98%6700.41.40%motif file (matrix) pdf
312PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-14-3.355e+010.0000810.02.64%9393.51.96%motif file (matrix) pdf
313Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-14-3.351e+010.00001008.03.28%12083.62.52%motif file (matrix) pdf
314Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-13-3.217e+010.00004942.016.08%69312.014.47%motif file (matrix) pdf
315Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer1e-13-3.214e+010.0000460.01.50%4845.41.01%motif file (matrix) pdf
316ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer1e-13-3.200e+010.0000620.02.02%6930.71.45%motif file (matrix) pdf
317TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-13-3.179e+010.0000785.02.55%9140.51.91%motif file (matrix) pdf
318E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-13-3.150e+010.00001282.04.17%15993.93.34%motif file (matrix) pdf
319JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-13-3.118e+010.0000703.02.29%8068.51.68%motif file (matrix) pdf
320Unknown1/Arabidopsis-Promoters/Homer1e-13-3.075e+010.0000610.01.99%6850.81.43%motif file (matrix) pdf
321GFY(?)/Promoter/Homer1e-13-3.072e+010.0000769.02.50%8976.71.87%motif file (matrix) pdf
322Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-12-2.993e+010.0000888.02.89%10633.22.22%motif file (matrix) pdf
323GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-12-2.883e+010.0000781.02.54%9232.31.93%motif file (matrix) pdf
324PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer1e-12-2.764e+010.00001522.04.95%19649.04.10%motif file (matrix) pdf
325MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-11-2.714e+010.00001538.05.00%19914.24.16%motif file (matrix) pdf
326GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-11-2.647e+010.0000772.02.51%9232.91.93%motif file (matrix) pdf
327NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-11-2.616e+010.00005807.018.90%83114.817.36%motif file (matrix) pdf
328Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-11-2.585e+010.00002743.08.93%37494.27.83%motif file (matrix) pdf
329ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer1e-11-2.558e+010.00003005.09.78%41376.08.64%motif file (matrix) pdf
330GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-10-2.524e+010.0000540.01.76%6159.61.29%motif file (matrix) pdf
331Unknown4/Drosophila-Promoters/Homer1e-10-2.487e+010.0000832.02.71%10144.12.12%motif file (matrix) pdf
332ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer1e-10-2.477e+010.0000582.01.89%6742.41.41%motif file (matrix) pdf
333n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-10-2.368e+010.00005284.017.19%75615.015.79%motif file (matrix) pdf
334FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-9-2.253e+010.0000746.02.43%9093.11.90%motif file (matrix) pdf
335ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer1e-9-2.240e+010.0000580.01.89%6830.61.43%motif file (matrix) pdf
336HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer1e-9-2.129e+010.0000545.01.77%6411.21.34%motif file (matrix) pdf
337T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer1e-8-2.031e+010.0000162.00.53%1489.10.31%motif file (matrix) pdf
338ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer1e-7-1.811e+010.0000942.03.07%12128.62.53%motif file (matrix) pdf
339GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-7-1.789e+010.0000421.01.37%4903.11.02%motif file (matrix) pdf
340E-box(bHLH)/Promoter/Homer1e-7-1.745e+010.0000701.02.28%8779.91.83%motif file (matrix) pdf
341TATA-box/Drosophila-Promoters/Homer1e-7-1.706e+010.0000489.01.59%5868.71.23%motif file (matrix) pdf
342AARE(HLH)/mES-cMyc-ChIP-Seq/Homer1e-7-1.688e+010.0000435.01.42%5142.81.07%motif file (matrix) pdf
343CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-7-1.669e+010.0000781.02.54%9954.52.08%motif file (matrix) pdf
344ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-6-1.544e+010.0000520.01.69%6386.31.33%motif file (matrix) pdf
345GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer1e-6-1.490e+010.0000429.01.40%5164.61.08%motif file (matrix) pdf
346Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-6-1.481e+010.0000585.01.90%7329.41.53%motif file (matrix) pdf
347Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-6-1.462e+010.0000374.01.22%4429.50.92%motif file (matrix) pdf
348Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer1e-6-1.416e+010.0000508.01.65%6297.61.32%motif file (matrix) pdf
349NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-5-1.374e+010.0000321.01.04%3755.40.78%motif file (matrix) pdf
350E2F(E2F)/Hela-CellCycle-Expression/Homer1e-5-1.281e+010.0000559.01.82%7099.01.48%motif file (matrix) pdf
351GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-5-1.265e+010.0000910.02.96%12122.92.53%motif file (matrix) pdf
352NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-4-1.144e+010.0000376.01.22%4631.30.97%motif file (matrix) pdf
353ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer1e-4-9.896e+000.000163.00.21%559.40.12%motif file (matrix) pdf
354EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer1e-4-9.572e+000.0001186.00.61%2136.00.45%motif file (matrix) pdf
355YY1(Zf)/Promoter/Homer1e-3-8.831e+000.0002798.02.60%10873.22.27%motif file (matrix) pdf
356RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-3-8.787e+000.0002175.00.57%2024.10.42%motif file (matrix) pdf
357Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-3-8.380e+000.0002329.01.07%4169.40.87%motif file (matrix) pdf
358SFP1/SacCer-Promoters/Homer1e-3-8.021e+000.0004680.02.21%9238.31.93%motif file (matrix) pdf
359ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer1e-3-7.459e+000.0006169.00.55%2006.40.42%motif file (matrix) pdf
360Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-3-7.288e+000.0007146.00.48%1703.00.36%motif file (matrix) pdf
361SeqBias: polyC-repeat1e-2-6.736e+000.001330727.099.99%478682.299.96%motif file (matrix) pdf
362LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer1e-2-6.480e+000.0016305.00.99%3966.60.83%motif file (matrix) pdf
363Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer1e-2-6.468e+000.0017219.00.71%2752.50.57%motif file (matrix) pdf
364c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-2-5.856e+000.00303684.011.99%54906.311.47%motif file (matrix) pdf
365GFX(?)/Promoter/Homer1e-2-5.730e+000.0034185.00.60%2323.70.49%motif file (matrix) pdf
366ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-2-5.545e+000.00411944.06.33%28497.15.95%motif file (matrix) pdf
367ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.398e+000.004846.00.15%463.40.10%motif file (matrix) pdf
368Unknown3/Drosophila-Promoters/Homer1e-2-5.385e+000.0048618.02.01%8630.01.80%motif file (matrix) pdf
369DREF/Drosophila-Promoters/Homer1e-2-5.345e+000.005073.00.24%812.50.17%motif file (matrix) pdf
370ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.017e+000.0069146.00.48%1822.80.38%motif file (matrix) pdf
371p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-2-4.709e+000.0094111.00.36%1354.40.28%motif file (matrix) pdf