Homer de novo Motif Results (/srv/scratch/imk1/TFBindingPredictionProject/MouseMutantData/ZF2/out/peak/idr/pseudo_reps/rep1/ZF2_rep1-pr.IDR0.05.HomerResults/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 63261
Total background sequences = 483317
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-249	-5.755e+02	56.22%	49.08%	77.7bp (107.8bp)	BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.868) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-191	-4.402e+02	9.66%	6.37%	71.0bp (100.0bp)	KLF14/MA0740.1/Jaspar(0.720) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-104	-2.398e+02	9.89%	7.36%	100.3bp (127.4bp)	JUN(var.2)/MA0489.1/Jaspar(0.683) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-88	-2.042e+02	8.11%	5.99%	99.7bp (127.6bp)	bap/MA0211.1/Jaspar(0.636) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-80	-1.849e+02	7.04%	5.16%	90.6bp (119.3bp)	NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer(0.655) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-78	-1.815e+02	6.48%	4.69%	91.7bp (121.6bp)	ZNF143\|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.695) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-69	-1.607e+02	14.01%	11.54%	93.9bp (125.9bp)	GCM1/MA0646.1/Jaspar(0.663) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-67	-1.555e+02	2.90%	1.82%	106.6bp (133.8bp)	MET31/Literature(Harbison)/Yeast(0.617) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-64	-1.478e+02	6.86%	5.18%	98.7bp (128.3bp)	ct/MA0218.1/Jaspar(0.749) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-63	-1.461e+02	3.23%	2.11%	102.9bp (132.1bp)	PB0151.1_Myf6_2/Jaspar(0.623) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-61	-1.427e+02	5.30%	3.86%	102.1bp (130.6bp)	NR4A2/MA0160.1/Jaspar(0.707) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-56	-1.291e+02	6.76%	5.20%	92.4bp (123.3bp)	PB0208.1_Zscan4_2/Jaspar(0.759) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-53	-1.240e+02	51.44%	48.16%	84.7bp (115.2bp)	Myc/MA0147.2/Jaspar(0.718) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-45	-1.044e+02	3.85%	2.80%	112.3bp (140.8bp)	zen/dmmpmm(Bigfoot)/fly(0.698) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-32	-7.512e+01	1.49%	0.95%	107.2bp (143.8bp)	unc-62/MA0918.1/Jaspar(0.641) More Information \| Similar Motifs Found	motif file (matrix)
16		1e-17	-4.121e+01	9.42%	8.38%	95.3bp (126.3bp)	PB0091.1_Zbtb3_1/Jaspar(0.661) More Information \| Similar Motifs Found	motif file (matrix)
17 *		1e-5	-1.277e+01	5.40%	4.98%	118.7bp (147.0bp)	SeqBias: polyA-repeat(0.931) More Information \| Similar Motifs Found	motif file (matrix)