# Parameters
data_name = "Tgif2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:45:30,131 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Tgif2: Motif: M00521_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Tgif2

Unique Cell types only TF-MoDISco finds Tgif2: #5

Cell type	Modisco	Homer
wES;posterior;2;E9.5;A;GEO	Pattern: metacluster_0/pattern_13 Significance: 0.0197769	Absent
BRN;PTMN;A;CL	Pattern: metacluster_1/pattern_15 Significance: 0.0121798	Absent
Heart;P0;D;En	Pattern: metacluster_1/pattern_15 Significance: 0.016601499999999998	Absent
npES;3rd_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_24 Significance: 0.0214858	Absent
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_19 Significance: 0.00514426	Absent

Unique Cell types only Homer finds Tgif2: #2

Cell type	Modisco	Homer
wES;Md_BRN;E11.5;D;En	Absent	Pattern: motif20.motif Significance: 0.050535500000000004
Muscle;A;CL	Absent	Pattern: motif19.motif Significance: 0.058948900000000005