# Parameters
data_name = "Pbx2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:27:23,851 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Pbx2: Motif: M09199_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Pbx2: #5

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_9 Significance: 0.00518991	Pattern: motif4.motif Significance: 0.00239477
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_11 Significance: 0.00139752	Pattern: motif6.motif Significance: 0.0045361
npES;posterior_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_5 Significance: 0.00723556	Pattern: motif5.motif Significance: 0.016621
npES;posterior_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.00134918	Pattern: motif7.motif Significance: 0.053362099999999996
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_0 Significance: 0.013307	Pattern: motif2.motif Significance: 0.0417252

Unique Cell types only TF-MoDISco finds Pbx2: #12

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E9.5;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.028447000000000004	Absent
npES;5th_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_11 Significance: 0.0172861	Absent
wES;posterior;1;E9.5;A;GEO	Pattern: metacluster_1/pattern_9 Significance: 0.011020499999999999	Absent
wES;NRL_Tube;E11.5;D;En	Pattern: metacluster_1/pattern_4 Significance: 0.0324432	Absent
npES;5th_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_1/pattern_17 Significance: 0.00917006	Absent
Adrenal;A;CL	Pattern: metacluster_1/pattern_10 Significance: 0.026358099999999995	Absent
AML;D;En	Pattern: metacluster_1/pattern_18 Significance: 0.0282623	Absent
ThMS_MEC;Aire++;A;GEO	Pattern: metacluster_1/pattern_13 Significance: 0.043742500000000004	Absent
NIH3T3_FBROBLST;D;En	Pattern: metacluster_1/pattern_20 Significance: 0.0349241	Absent
KDNY;P0;D;En	Pattern: metacluster_1/pattern_3 Significance: 0.03993	Absent
CLP;A;CL	Pattern: metacluster_1/pattern_21 Significance: 0.024125999999999998	Absent
KDNY;8wks;D;En	Pattern: metacluster_1/pattern_19 Significance: 0.0141534	Absent

No Cell types only Homer finds Pbx2