# Parameters
data_name = "Myb"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:21:07,099 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Myb: Motif: M09261_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Myb: #2

Cell type	Modisco	Homer
G_NRN_P;A;GEO	Pattern: metacluster_1/pattern_0 Significance: 0.0490626	Pattern: motif5.motif Significance: 0.048692
wES;RTN;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.042715699999999995	Pattern: motif14.motif Significance: 0.058075699999999994

Unique Cell types only TF-MoDISco finds Myb: #6

Cell type	Modisco	Homer
CRBL_GRNL_Precrsr;A;GEO	Pattern: metacluster_0/pattern_0 Significance: 0.051241999999999996	Absent
prePLSM_B;A;GEO	Pattern: metacluster_1/pattern_20 Significance: 0.040053500000000006	Absent
wES;WHL_BRN;E14.5;D;GEO	Pattern: metacluster_0/pattern_2 Significance: 0.0448477	Absent
Hnd_BRN;P0;D;En	Pattern: metacluster_1/pattern_3 Significance: 0.03081	Absent
Heart;D;En	Pattern: metacluster_0/pattern_8 Significance: 0.0114646	Absent
wES;5th_Rhmbmr;E9.5;A;GEO	Pattern: metacluster_0/pattern_22 Significance: 0.016837599999999998	Absent

Unique Cell types only Homer finds Myb: #1

Cell type	Modisco	Homer
NPC;Ch13;A;GEO	Absent	Pattern: motif13.motif Significance: 0.050229199999999995