# Parameters
data_name = "Hoxd10"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:13:29,692 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Hoxd10: Motif: M00509_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Hoxd10: #6

Cell type	Modisco	Homer
wES;limb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.00700445 / Pattern: metacluster_0/pattern_5 Significance: 0.00100992	Pattern: motif8.motif Significance: 0.000153787
wES;Hnd_lmb;E11.5;D;En	Pattern: metacluster_0/pattern_1 Significance: 0.000196363 / Pattern: metacluster_0/pattern_3 Significance: 0.012084200000000002	Pattern: motif5.motif Significance: 0.00492534
LRG_INTSTN;8wks;D;En	Pattern: metacluster_1/pattern_4 Significance: 0.00107998	Pattern: motif4.motif Significance: 0.000350679
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_5 Significance: 0.0117782	Pattern: motif2.motif Significance: 0.0133718
ThMS_MEC;Aire++;A;GEO	Pattern: metacluster_1/pattern_13 Significance: 0.005052	Pattern: motif15.motif Significance: 0.0126792
SML_INTSTN;A;CL	Pattern: metacluster_0/pattern_4 Significance: 0.000868327	Pattern: motif3.motif Significance: 0.00134968

Unique Cell types only TF-MoDISco finds Hoxd10: #13

Cell type	Modisco	Homer
MPP;A;CL	Pattern: metacluster_1/pattern_21 Significance: 0.039349800000000004	Absent
wES;limb;E14.5;D;En	Pattern: metacluster_1/pattern_13 Significance: 0.0220637	Absent
wES;Fr_lmb;E11.5;D;En	Pattern: metacluster_1/pattern_4 Significance: 0.00777344 / Pattern: metacluster_1/pattern_13 Significance: 0.0133659	Absent
npES;posterior_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.00446517	Absent
BCK_SKN;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.0395145	Absent
Adipose;D;En	Pattern: metacluster_0/pattern_22 Significance: 0.0419153	Absent
LNG_TRM_HSC;A;CL	Pattern: metacluster_1/pattern_20 Significance: 0.0353279	Absent
iVIP_NRN;A;GEO	Pattern: metacluster_1/pattern_6 Significance: 0.050535000000000004	Absent
LRG_INTSTN;A;CL	Pattern: metacluster_0/pattern_11 Significance: 0.000677102	Absent
wES;WHL_BRN;E14.5;D;GEO	Pattern: metacluster_0/pattern_0 Significance: 0.0397185	Absent
wES.Fr_BRN;E14.4;D;En	Pattern: metacluster_0/pattern_2 Significance: 0.027662700000000002	Absent
Md_BRN;D;En	Pattern: metacluster_1/pattern_3 Significance: 0.0251641	Absent
wES;WHL_BRN;E14.5;D;En	Pattern: metacluster_1/pattern_0 Significance: 0.0240827	Absent

Unique Cell types only Homer finds Hoxd10: #1

Cell type	Modisco	Homer
KDNY;P0;D;En	Absent	Pattern: motif4.motif Significance: 3.74202e-05