Information for 6-AAAATTTTTCAC (Motif 9)


Reverse Opposite:

p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.730
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.91%
Number of Background Sequences with motif720.9
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets93.5 +/- 44.0bp
Average Position of motif in Background97.8 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STB3/MA0390.1/Jaspar

Match Rank:1
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----AAAATTTTTCAC-----
GTCCAAAATTTTTCACTCTGG

SFP1/SacCer-Promoters/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-AAAATTTTTCAC
RAAAATTTTTHH-

SFP1/MA0378.1/Jaspar

Match Rank:3
Score:0.82
Offset:-6
Orientation:reverse strand
Alignment:------AAAATTTTTCAC---
CNGNAGAAAATTTTTTNNNNT

cad/dmmpmm(Down)/fly

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AAAATTTTTCAC
-AAATTTTT---

SUM1/MA0398.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAAATTTTTCAC
AAAATTTTT---

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AAAATTTTTCAC
----TTTTTT--

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AAAATTTTTCAC-
---ATTTTCCATT

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAAATTTTTCAC-
---ATTTTCCATT

AHL12/MA0932.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAAATTTTTCAC
-AATTAATT---

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAAATTTTTCAC
----TTTTCCA-