Information for 6-AAGAATAGCA (Motif 7)


Reverse Opposite:

p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.842
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif5.09%
Number of Background Sequences with motif505.3
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets82.5 +/- 58.5bp
Average Position of motif in Background103.3 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AAGAATAGCA
ATGCTAAAAATAGAA

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AAGAATAGCA
GCTAAAAATAGC-

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAGAATAGCA
DCYAAAAATAGM-

KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGAATAGCA
ARGAATAWWN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAGAATAGCA
CCAAAAATAG--

br-Z2/dmmpmm(Down)/fly

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGAATAGCA
ATTAATA---

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAGAATAGCA
GAACAATGG--

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------AAGAATAGCA-----
AATAAAGAACAATAGAATTTCA

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAGAATAGCA
GCTATAAATAGC-

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AAGAATAGCA
KCCAAAAATAGC-