Information for 5-TTACAATAATAG (Motif 6)


Reverse Opposite:

p-value:1e-11
log p-value:-2.693e+01
Information Content per bp:1.709
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif6.24%
Number of Background Sequences with motif722.4
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets103.1 +/- 51.4bp
Average Position of motif in Background96.1 +/- 63.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ATHB-51/MA0952.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TTACAATAATAG
---CAATAATT-

ATHB1(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TTACAATAATAG
---CAATAATTG

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTACAATAATAG--
NNTNANAACAATTNNA

ATHB5(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TTACAATAATAG----
---CAATAATTGGNCC

ATHB-5/MA0110.2/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TTACAATAATAG----
---CAATAATTGGNCC

ATHB-6/MA0953.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTACAATAATAG
--GCAATAATT-

HAT5/MA0008.2/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TTACAATAATAG--
--GCAATAATTGAA

bab1/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTACAATAATAG
-AACAATAATA-

ap/dmmpmm(Down)/fly

Match Rank:9
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TTACAATAATAG
----AATAATA-

Antp/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.68
Offset:5
Orientation:forward strand
Alignment:TTACAATAATAG
-----ATAATT-