Information for 3-AAAATGTGTG (Motif 5)


Reverse Opposite:

p-value:1e-13
log p-value:-3.200e+01
Information Content per bp:1.866
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.58%
Number of Background Sequences with motif485.0
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets67.6 +/- 50.1bp
Average Position of motif in Background103.5 +/- 74.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

sd/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAAATGTGTG
AANATGTNT-

DOF2.5/MA0977.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAAATGTGTG
AAAAAGTG--

twi/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAAATGTGTG
-ACATGTG--

TEC1(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAAATGTGTG
AGAATGTG--

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAAATGTGTG--
--AAGGTGTGAA

dsx/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAATGTGTG--
NTAANACAATGTANCNN

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAATGTGTG-----
--AAGGTGTGAAAAT

CDF2/MA0973.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTGTG
AAAAAAGTGA-

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAAATGTGTG-
---AGGTGTGA

MET4/MET4_SM/[](Harbison)/Yeast

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAATGTGTG-----
AAAAANTGTGGCGCC