Information for 2-KCCGCGCG (Motif 4)


Reverse Opposite:

p-value:1e-14
log p-value:-3.322e+01
Information Content per bp:1.626
Number of Target Sequences with motif215.0
Percentage of Target Sequences with motif35.30%
Number of Background Sequences with motif9813.8
Percentage of Background Sequences with motif21.48%
Average Position of motif in Targets99.1 +/- 54.1bp
Average Position of motif in Background100.0 +/- 93.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SUT1/MA0399.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:KCCGCGCG
-CCCCGCG

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:KCCGCGCG
CGCGCGCG

SUT1(MacIsaac)/Yeast

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:KCCGCGCG
-CCCCGCG

RSC3/MA0374.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:KCCGCGCG-
--CGCGCGG

SUT1?/SacCer-Promoters/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-KCCGCGCG
CCCCGCGC-

STP1(MacIsaac)/Yeast

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--KCCGCGCG
GCGCCGCA--

PDR1/MA0352.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:KCCGCGCG
TCCGCGGA

SKN7(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:KCCGCGCG
TCCGGGCC

STP1/MA0394.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--KCCGCGCG
GCGCCGCA--

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:KCCGCGCG------
GCCGCGCAGTGCGT