Information for 22-TACGATGGTGAC (Motif 25)


Reverse Opposite:

p-value:1e-3
log p-value:-8.159e+00
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets95.4 +/- 49.2bp
Average Position of motif in Background139.6 +/- 54.0bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)2.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX4/MA0799.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TACGATGGTGAC-
CGTTGCCATGGCAACG

RFX3/MA0798.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TACGATGGTGAC-
CGTTGCCATGGCAACN

RFX2/MA0600.2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TACGATGGTGAC-
CGTTGCCATGGCAACG

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TACGATGGTGAC-
TTGCCATGGCAACN

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TACGATGGTGAC-
TTGCCATGGCAACC

UPC2/MA0411.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TACGATGGTGAC
TATACGA-------

RFX5/MA0510.2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACGATGGTGAC-
CGTTGCCATGGCAACG

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TACGATGGTGAC
--TGCTGGT---

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TACGATGGTGAC
KGTTGCCATGGCAAC

CHA4(MacIsaac)/Yeast

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TACGATGGTGAC
TGCGATGAG---