Information for 18-GTTTATATCA (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.353e+01
Information Content per bp:1.906
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif209.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets103.1 +/- 56.1bp
Average Position of motif in Background104.9 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GTTTATATCA
TATTGTTTATT---

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATATCA
CBTGTTTAYAWW-

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTTTATATCA
TGTTTATTT--

Optix/MA0199.1/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GTTTATATCA
-----TATCA

MOT2/MA0379.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTTTATATCA
---TATAT--

fkh-2/MA0920.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATATCA
TTGTTTAC----

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTTATATCA
TGTTTAC----

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATATCA
TTGTTTAC----

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTATATCA
TTGTTTAC----

ECM22(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTTTATATCA-
GCTTATACGAG