Information for 16-CTTTGCCACC (Motif 22)


Reverse Opposite:

p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.815
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif557.8
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets87.8 +/- 52.3bp
Average Position of motif in Background103.5 +/- 73.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:CTTTGCCACC
-TTTGCCACC

RPN4(MacIsaac)/Yeast

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CTTTGCCACC-
TTTTGCCACCG

RPN4/MA0373.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTTTGCCACC
---CGCCACC

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTTTGCCACC-----
ACTATGCCAACCTACC

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTTTGCCACC-
--ATGCCAACC

slbo/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTTTGCCACC-
-TTTGCAATCA

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTTGCCACC--
-TTTCACACCTN

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTTGCCACC
-CTTGGCAA-

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTTGCCACC
-TTTTCCA--

Six4/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTTGCCACC
ATTTGATACC