Information for 14-CTGGTCTTTAGC (Motif 21)


Reverse Opposite:

p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.781
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif118.0
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets92.4 +/- 54.7bp
Average Position of motif in Background98.9 +/- 77.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

id1/MA0120.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGGTCTTTAGC-
-TTTTCCTTTTCG

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGGTCTTTAGC-
NNATTGGACTTTNGNN

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTGGTCTTTAGC
----TTTTTA--

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGGTCTTTAGC--
GCTGACCTTGAACTN

DOF5.7/MA0984.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGGTCTTTAGC
--CCTCTTTT--

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGGTCTTTAGC
CTGACCTTTG--

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGTCTTTAGC----
-TGACCTTTGCCCTAN

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGGTCTTTAGC---
-TGACCTTTGCCCCA

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGTCTTTAGC---
-TGACCTTTGCCCTA

STB1(MacIsaac)/Yeast

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGGTCTTTAGC-
-----TTTTCGCG