Information for 11-GATCATCGGTGC (Motif 17)


Reverse Opposite:

p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.834
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif80.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets124.3 +/- 48.3bp
Average Position of motif in Background102.3 +/- 79.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA15/MA1016.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GATCATCGGTGC
NNGATCANN-----

YPR013C/MA0434.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GATCATCGGTGC
NGATCTACA----

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GATCATCGGTGC
CAGATCA-------

ECM23/MA0293.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GATCATCGGTGC
NNNAGATCTNN-----

PHYPADRAFT_182268/MA1008.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GATCATCGGTGC
--TTGTCGGTGA

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GATCATCGGTGC----
------CGGTGCTTCC

GATA8/MA1017.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATCATCGGTGC
NNAGATCTN------

PH0017.1_Cux1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GATCATCGGTGC
TAGTGATCATCATTA-

GAT4/MA0302.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GATCATCGGTGC
NNTAGATCTNN-----

SRD1/MA0389.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATCATCGGTGC
AGATCTAC-----