Information for 12-GGAATCGAAC (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.653
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif7.55%
Number of Background Sequences with motif1179.5
Percentage of Background Sequences with motif2.58%
Average Position of motif in Targets104.7 +/- 52.8bp
Average Position of motif in Background100.3 +/- 70.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SNF1(MacIsaac)/Yeast

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGAATCGAAC----
CCGGGGATCGAACCCGG

OPI1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GGAATCGAAC-
----TCGAACC

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGAATCGAAC
TGGAACAGMA-

OPI1(MacIsaac)/Yeast

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGAATCGAAC--
-----CGAACCG

HSF1/MA0319.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGAATCGAAC-
---ATGGAACA

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGAATCGAAC--
------GAACAC

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGAATCGAAC--
------GAACAC

OPI1/MA0349.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGAATCGAAC--
-----CGAACCG

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAATCGAAC-
CGGAAGTGAAAC

YER051W(MacIsaac)/Yeast

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGAATCGAAC
---TTCGAA-