Information for 10-TAACCTTTCG (Motif 13)


Reverse Opposite:

p-value:1e-10
log p-value:-2.319e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif203.8
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets109.0 +/- 48.5bp
Average Position of motif in Background100.8 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TAACCTTTCG--
TGACCTTTNCNT

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TAACCTTTCG--
NNNNTGACCTTTNNNN

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TAACCTTTCG--
NNNGTGACCTTTGNNN

tll/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAACCTTTCG
TTAACTTTT--

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAACCTTTCG
CAAGCTT---

Kr/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAACCTTTCG
TAACCCTTTNG

tll/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAACCTTTCG
TGACTTT---

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAACCTTTCG
GTGACCTT---

Kr/dmmpmm(Papatsenko)/fly

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAACCTTTCG
TAACCCTTT-

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TAACCTTTCG
AAGATATCCTT---