Information for 7-ACGATATATATC (Motif 12)


Reverse Opposite:

p-value:1e-10
log p-value:-2.340e+01
Information Content per bp:1.882
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets116.6 +/- 63.4bp
Average Position of motif in Background115.8 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPT15/MA0386.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACGATATATATC-------
NNNNAATATATATANCTANNN

TATA-box/SacCer-Promoters/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACGATATATATC--
----TATATAWDVV

Cf2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ACGATATATATC
---GTATATATA

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACGATATATATC-----
ATGGGATATATCCGCCT

Cf2/MA0015.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACGATATATATC-
---GTATATATAC

MOT2/MA0379.1/Jaspar

Match Rank:6
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:ACGATATATATC
------TATAT-

SeqBias: TA-repeat

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACGATATATATC
--TATATATATA

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACGATATATATC--
NNAGATNVNWATCTN

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACGATATATATC----
NANTTATATATAANGN

NHP6A/MA0345.1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACGATATATATC-----
ATGACCTATATATAAAAATGA