mkdir: missing operand Try 'mkdir --help' for more information. usage: chrombpnet pipeline [-h] -g GENOME -c CHROM_SIZES (-ibam INPUT_BAM_FILE | -ifrag INPUT_FRAGMENT_FILE | -itag INPUT_TAGALIGN_FILE) -o OUTPUT_DIR -d {ATAC,DNASE} -p PEAKS -n NONPEAKS -fl CHR_FOLD_PATH [-oth OUTLIER_THRESHOLD] [--ATAC-ref-path ATAC_REF_PATH] [--DNASE-ref-path DNASE_REF_PATH] [--num-samples NUM_SAMPLES] [-il INPUTLEN] [-ol OUTPUTLEN] [-s SEED] [-e EPOCHS] [-es EARLY_STOP] [-l LEARNING_RATE] [-track [TRACKABLES [TRACKABLES ...]]] [-a ARCHITECTURE_FROM_FILE] [-fp FILE_PREFIX] [-hp HTML_PREFIX] [--bsort] [--tmpdir TMPDIR] [--no-st] -b BIAS_MODEL_PATH [-sr NEGATIVE_SAMPLING_RATIO] [-fil FILTERS] [-dil N_DILATION_LAYERS] [-j MAX_JITTER] [-bs BATCH_SIZE] chrombpnet pipeline: error: argument -b/--bias-model-path: expected one argument Traceback (most recent call last): File "/home/groups/akundaje/soumyak/miniconda3/envs/chrombpnet/bin/chrombpnet", line 33, in sys.exit(load_entry_point('chrombpnet', 'console_scripts', 'chrombpnet')()) File "/home/groups/akundaje/soumyak/chrombpnet/chrombpnet/CHROMBPNET.py", line 23, in main pipelines.chrombpnet_train_pipeline(args) File "/home/groups/akundaje/soumyak/chrombpnet/chrombpnet/pipelines.py", line 37, in chrombpnet_train_pipeline find_chrombpnet_hyperparams.main(args_copy) File "/home/groups/akundaje/soumyak/chrombpnet/chrombpnet/helpers/hyperparameters/find_chrombpnet_hyperparams.py", line 148, in main bias_model = param_utils.load_model_wrapper(args.bias_model_path) File "/home/groups/akundaje/soumyak/chrombpnet/chrombpnet/helpers/hyperparameters/param_utils.py", line 62, in load_model_wrapper model=load_model(model_h5) File "/home/groups/akundaje/soumyak/miniconda3/envs/chrombpnet/lib/python3.8/site-packages/keras/utils/traceback_utils.py", line 67, in error_handler raise e.with_traceback(filtered_tb) from None File "/home/groups/akundaje/soumyak/miniconda3/envs/chrombpnet/lib/python3.8/site-packages/keras/saving/save.py", line 204, in load_model raise IOError(f'No file or directory found at {filepath_str}') OSError: No file or directory found at #