{
    "general": {
        "date": "2024-10-25 12:51:49",
        "title": "roussos_2024.infant.GLU",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.2137369701390592,
                "fri_blacklist": 0.01204099395168191,
                "fri_prom": 0.07661496574886406,
                "fri_enh": 0.22464493854216347
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 181520,
                "Np": 0,
                "N_opt": 181520,
                "N_consv": 181520,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 78331,
                "Np": 0,
                "N_opt": 78331,
                "N_consv": 78331,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 297384
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 232.0,
                "50_pct": 449.0,
                "75_pct": 851.0,
                "max_size": 3246.0,
                "mean": 592.2910378500525
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 831.0,
                "50_pct": 1078.0,
                "75_pct": 1339.0,
                "max_size": 3246.0,
                "mean": 1105.1630771980442
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 472.0,
                "50_pct": 740.0,
                "75_pct": 1082.0,
                "max_size": 3246.0,
                "mean": 809.0003691053328
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.16201509333301053
                },
                "rep1-pr1": {
                    "frip": 0.1582467175319096
                },
                "rep1-pr2": {
                    "frip": 0.15825205712033497
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.13264709879298242
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.08775970410293768
                }
            }
        }
    }
}