digraph D {
graph [rankdir=LR nodesep=0.1 ranksep=0.3];
node [shape=box fontsize=9 margin=0.05 penwidth=0.5 height=0 fillcolor=lightcyan color=darkgrey style=filled];
edge [arrowsize=0.5 color=darkgrey penwidth=0.5];
subgraph cluster_pooled_rep {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = oldlace;
labeljust = "l";
label = "Pooled replicate";
}
subgraph cluster_rep1 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 1";
"-4276622970104647153";
"4511979738535788784";
"-3323367527628409097";
"4212478003973666631";
"-7893803054408682685";
"1307686647276502402";
"-4047355319975207703";
}
subgraph cluster_rep2 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 2";
}
subgraph cluster_rep3 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 3";
}
subgraph cluster_rep4 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 4";
}
subgraph cluster_rep5 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 5";
}
subgraph cluster_rep6 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 6";
}
subgraph cluster_rep7 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 7";
}
subgraph cluster_rep8 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 8";
}
subgraph cluster_rep9 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 9";
}
subgraph cluster_rep10 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Replicate 10";
}
subgraph cluster_pooled_ctl {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = oldlace;
labeljust = "l";
label = "Pooled control";
}
subgraph cluster_ctl1 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 1";
}
subgraph cluster_ctl2 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 2";
}
subgraph cluster_ctl3 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 3";
}
subgraph cluster_ctl4 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 4";
}
subgraph cluster_ctl5 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 5";
}
subgraph cluster_ctl6 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 6";
}
subgraph cluster_ctl7 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 7";
}
subgraph cluster_ctl8 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 8";
}
subgraph cluster_ctl9 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 9";
}
subgraph cluster_ctl10 {
style = "filled, dashed";
fontsize = 9;
color = darkgrey;
penwidth = 0.5;
fillcolor = honeydew;
labeljust = "l";
label = "Control 10";
}
"-4276622970104647153" [label="macs2_signal_track" href="atac.macs2_signal_track" target="blank" tooltip="atac.macs2_signal_track"];
"4511979738535788784" [shape=box style="filled, rounded" fillcolor=lightyellow label="BW\np-val" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/roussos_2024.elderly.Microglia.pval.signal.bigwig" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-macs2_signal_track/shard-0/glob-7ab0340dfeb10ca109917cbdcc568548/roussos_2024.elderly.Microglia.pval.signal.bigwig"];
"-3323367527628409097" [shape=box style="filled, rounded" fillcolor=lightyellow label="BW\nFC" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/roussos_2024.elderly.Microglia.fc.signal.bigwig" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-macs2_signal_track/shard-0/glob-8876d8ced974dc46a0c7a4fac20a3a95/roussos_2024.elderly.Microglia.fc.signal.bigwig"];
"4212478003973666631" [label="call_peak" href="atac.call_peak" target="blank" tooltip="atac.call_peak"];
"-7893803054408682685" [shape=box style="filled, rounded" fillcolor=lightyellow label="Peak\n(bfilt)" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/roussos_2024.elderly.Microglia.pval0.01.300K.bfilt.narrowPeak.gz" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-call_peak/shard-0/glob-2e6c87fc90e45fa5dbda88934d454cd3/roussos_2024.elderly.Microglia.pval0.01.300K.bfilt.narrowPeak.gz"];
"1307686647276502402" [shape=box style="filled, rounded" fillcolor=lightyellow label="Peak" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/roussos_2024.elderly.Microglia.pval0.01.300K.narrowPeak.gz" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-call_peak/shard-0/glob-254907fcd430d7e6c9bf67ac4585adb4/roussos_2024.elderly.Microglia.pval0.01.300K.narrowPeak.gz"];
"-4368933733976145784" [label="reproducibility_overlap" href="atac.reproducibility_overlap" target="blank" tooltip="atac.reproducibility_overlap"];
"-3145775381169366310" [shape=box style="filled, rounded" fillcolor=lightyellow label="Overlap Peak\noptimal" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_overlap/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/overlap.optimal_peak.narrowPeak.gz"];
"8485729440794608188" [shape=oval style="filled" fillcolor=gainsboro fontsize=6 margin=0 label="Overlap\nreproducibility" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_overlap/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/overlap.reproducibility.qc"];
"-2630043654685410101" [label="reproducibility_idr" href="atac.reproducibility_idr" target="blank" tooltip="atac.reproducibility_idr"];
"-5243831394489287293" [shape=box style="filled, rounded" fillcolor=lightyellow label="IDR Peak\noptimal" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_idr/glob-1b1244d5baf1a7d98d4b7b76d79e43bf/idr.optimal_peak.narrowPeak.gz"];
"137021020195483804" [shape=oval style="filled" fillcolor=gainsboro fontsize=6 margin=0 label="IDR\nreproducibility" href="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc" target="blank" tooltip="gs://neuro-variants/data/processed/atac_pipeline_outputs/atac/1b58d16f-2c4b-41a3-a0aa-158d843aa3f7/call-reproducibility_idr/glob-2e0755477c7b64fb4cd35cd75c0b0f2a/idr.reproducibility.qc"];
"-4047355319975207703" [shape=box style="filled, rounded" fillcolor=pink label="TAG-ALIGN" href="gs://neuro-variants/data/processed/roussos_2024/tagaligns/roussos_2024.elderly.Microglia.tagAlign.gz" target="blank" tooltip="gs://neuro-variants/data/processed/roussos_2024/tagaligns/roussos_2024.elderly.Microglia.tagAlign.gz"];
"-4276622970104647153" -> "4511979738535788784";
"-4276622970104647153" -> "-3323367527628409097";
"4212478003973666631" -> "-7893803054408682685";
"4212478003973666631" -> "1307686647276502402";
"1307686647276502402" -> "-4368933733976145784";
"1307686647276502402" -> "-2630043654685410101";
"-4368933733976145784" -> "8485729440794608188";
"-4368933733976145784" -> "-3145775381169366310";
"-2630043654685410101" -> "-5243831394489287293";
"-2630043654685410101" -> "137021020195483804";
"-4047355319975207703" -> "-2630043654685410101";
"-4047355319975207703" -> "4212478003973666631";
"-4047355319975207703" -> "-4276622970104647153";
"-4047355319975207703" -> "-4368933733976145784";
}