{
    "general": {
        "date": "2024-10-25 14:09:10",
        "title": "roussos_2024.adolescence.OPC",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.39922179236186617,
                "fri_blacklist": 0.006284945473610864,
                "fri_prom": 0.21669815107608809,
                "fri_enh": 0.28545449553864627
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 247318,
                "Np": 0,
                "N_opt": 247318,
                "N_consv": 247318,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 161515,
                "Np": 0,
                "N_opt": 161515,
                "N_consv": 161515,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 298967
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 392.0,
                "50_pct": 794.0,
                "75_pct": 1243.0,
                "max_size": 3698.0,
                "mean": 870.30697702422
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 877.0,
                "50_pct": 1177.0,
                "75_pct": 1496.0,
                "max_size": 3698.0,
                "mean": 1214.545825465127
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 587.0,
                "50_pct": 946.0,
                "75_pct": 1332.0,
                "max_size": 3698.0,
                "mean": 997.4836930591384
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.38245100925329034
                },
                "rep1-pr1": {
                    "frip": 0.37515515720804177
                },
                "rep1-pr2": {
                    "frip": 0.3750768872013652
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.36767380908927644
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.3290775014223025
                }
            }
        }
    }
}
