{
    "general": {
        "date": "2024-10-26 06:09:50",
        "title": "roussos_2024.adolescence.Astrocyte",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.38605192336688104,
                "fri_blacklist": 0.008594117576269312,
                "fri_prom": 0.19134834335729933,
                "fri_enh": 0.29833143119633226
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 269753,
                "Np": 0,
                "N_opt": 269753,
                "N_consv": 269753,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 195795,
                "Np": 0,
                "N_opt": 195795,
                "N_consv": 195795,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 298499
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 525.0,
                "50_pct": 928.0,
                "75_pct": 1340.0,
                "max_size": 4233.0,
                "mean": 972.3641285230436
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 862.0,
                "50_pct": 1178.0,
                "75_pct": 1502.0,
                "max_size": 4233.0,
                "mean": 1207.4316555581092
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 634.0,
                "50_pct": 1005.0,
                "75_pct": 1384.0,
                "max_size": 4233.0,
                "mean": 1043.664889732459
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.3776065797313035
                },
                "rep1-pr1": {
                    "frip": 0.3706068606024536
                },
                "rep1-pr2": {
                    "frip": 0.37048554537822326
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.36858570525589734
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.3363752329728243
                }
            }
        }
    }
}
