{
    "general": {
        "date": "2024-06-10 05:18:52",
        "title": "encode_2024.LV.pericyte.In",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.48024675926998783,
                "fri_blacklist": 0.02161070386989663,
                "fri_prom": 0.22226480059115017,
                "fri_enh": 0.33612800410374155
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 97944,
                "Np": 0,
                "N_opt": 97944,
                "N_consv": 97944,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 48106,
                "Np": 0,
                "N_opt": 48106,
                "N_consv": 48106,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 195518
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 188.0,
                "50_pct": 300.0,
                "75_pct": 584.0,
                "max_size": 2371.0,
                "mean": 431.67379985474486
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 575.0,
                "50_pct": 788.0,
                "75_pct": 1031.0,
                "max_size": 2371.0,
                "mean": 821.7911487132582
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 372.0,
                "50_pct": 577.0,
                "75_pct": 847.0,
                "max_size": 2371.0,
                "mean": 643.0434329821122
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.38427980521069055
                },
                "rep1-pr1": {
                    "frip": 0.38195494776789873
                },
                "rep1-pr2": {
                    "frip": 0.3745586243907984
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.33126063068391953
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.25633353092166516
                }
            }
        }
    }
}
