{
    "general": {
        "date": "2024-06-10 05:12:58",
        "title": "encode_2024.LV.endocardial.H",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.5372347542328116,
                "fri_blacklist": 0.020122145111067864,
                "fri_prom": 0.24901770882565544,
                "fri_enh": 0.3611562647696628
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 87958,
                "Np": 0,
                "N_opt": 87958,
                "N_consv": 87958,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 40528,
                "Np": 0,
                "N_opt": 40528,
                "N_consv": 40528,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 159626
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 192.0,
                "50_pct": 313.0,
                "75_pct": 582.0,
                "max_size": 2373.0,
                "mean": 431.0879368022753
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 553.0,
                "50_pct": 757.0,
                "75_pct": 987.0,
                "max_size": 2373.0,
                "mean": 790.374703908409
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 344.0,
                "50_pct": 535.0,
                "75_pct": 800.0,
                "max_size": 2373.0,
                "mean": 603.4358898565224
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.4279849705649309
                },
                "rep1-pr1": {
                    "frip": 0.4526330399093664
                },
                "rep1-pr2": {
                    "frip": 0.463027190080347
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.36613407552336735
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.2672500973060135
                }
            }
        }
    }
}