{
    "general": {
        "date": "2024-06-10 11:46:56",
        "title": "encode_2024.LV.cardiomyocyte.In",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.46712970538401877,
                "fri_blacklist": 0.03543441864608602,
                "fri_prom": 0.20426218145375802,
                "fri_enh": 0.347016672061566
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 263020,
                "Np": 0,
                "N_opt": 263020,
                "N_consv": 263020,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 177081,
                "Np": 0,
                "N_opt": 177081,
                "N_consv": 177081,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 299475
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 353.0,
                "50_pct": 620.0,
                "75_pct": 1016.0,
                "max_size": 3965.0,
                "mean": 733.9298038233576
            },
            "idr_opt": {
                "min_size": 151.0,
                "25_pct": 567.0,
                "50_pct": 861.0,
                "75_pct": 1215.0,
                "max_size": 3965.0,
                "mean": 928.1988129725945
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 425.0,
                "50_pct": 698.0,
                "75_pct": 1076.0,
                "max_size": 3965.0,
                "mean": 797.1422971637138
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.3956847280900626
                },
                "rep1-pr1": {
                    "frip": 0.38908119102554184
                },
                "rep1-pr2": {
                    "frip": 0.38490332381745457
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.38473288278413176
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.3494561432735726
                }
            }
        }
    }
}
